miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459639.1/39710-39600 4568:Triticum monococcum
Length = 111
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaagacgttttt 39
|||||||||||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatgtaagacgttttt 37
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 37 aaaaacgtcttacattatgggacggag 11
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
||||||||||||| ||||||||| |||||||||
Sbjct: 107 tactccctccgtcccataatgtaggacgttttt 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
||||||||| |||||||||||||||||
Sbjct: 75 aaaaacgtcctacattatgggacggag 101
>RF00906;MIR1122;AY663391.1/33436-33528 4571:Triticum turgidum
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
||||||||||||| |||||||||||||||||||
Sbjct: 89 tactccctccgtcccataatgtaagacgttttt 57
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 57 aaaaacgtcttacattatgggacggag 83
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctctgtctcataatgtaagacgttttt 37
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
||||||||||||| ||||||||||||| |||||
Sbjct: 90 tactccctccgtcccataatgtaagacattttt 58
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
||||| |||||||||||||||||||||
Sbjct: 58 aaaaatgtcttacattatgggacggag 84
>RF00906;MIR1122;AB298184.1/14323-14229 4565:Triticum aestivum
(bread wheat)
Length = 95
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 59 aaaaacgtcttacattatgggacggag 85
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
|||| |||||||| |||||||||||||||||||
Sbjct: 91 tacttcctccgtcccataatgtaagacgttttt 59
>RF00906;MIR1122;DQ537335.1/54883-54975 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaagacgttttt 39
||||||||||||||| |||||||||||||| ||||
Sbjct: 3 tatactccctccgtcccataatgtaagacgctttt 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||| ||||||||||||||||||||||
Sbjct: 37 aaaagcgtcttacattatgggacggag 11
>RF00906;MIR1122;EU187471.1/291-190 40247:Dasypyrum villosum
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 37 aaaaacgtcttacattatgggacggag 11
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
|||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtcccataatgtaagacgttttt 37
>RF00906;MIR1122;DQ247823.1/803-901 4487:Aegilops searsii
Length = 99
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 64 aaaaacgtcttacattatgggacggag 90
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatgggacg 98
||||||||||||||||||||||||
Sbjct: 37 aaaaacgtcttacattatgggacg 14
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 cctccgtctcataatgtaagacgttttt 39
|||||||| |||||||||||||||||||
Sbjct: 91 cctccgtcccataatgtaagacgttttt 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaagacgttttt 39
|||||| ||| |||| |||||||||||||||||||
Sbjct: 3 tatactaccttcgtcccataatgtaagacgttttt 37
>RF00906;MIR1122;FJ436986.1/65665-65790 37682:Aegilops tauschii
Length = 126
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||||||||||||||||||||||||
Sbjct: 35 aaaaacgtcttacattatgggacggag 61
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 cctccgtctcataatgtaagacgttttt 39
|||||||| |||||||||||||||||||
Sbjct: 62 cctccgtcccataatgtaagacgttttt 35
>RF00906;MIR1122;EF397435.1/125-217 4588:Lophopyrum elongatum
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 ttgcaaaaacgtcttacattatgggacgga 100
|||||||||||| |||||||||||||||||
Sbjct: 41 ttgcaaaaacgtattacattatgggacgga 12
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 tccgtctcataatgtaagacgtttttataagctatgttagt 54
|||||| |||||||||| |||||||| |||||||||||||
Sbjct: 12 tccgtcccataatgtaatacgtttttgcaagctatgttagt 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 tttgcaaaaacgtcttacattatggga 96
|||| ||||||||||||||||||||||
Sbjct: 52 tttgtaaaaacgtcttacattatggga 78
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgttttta 40
||||||||| || ||||||||||||||||||||
Sbjct: 89 tactccctctatcccataatgtaagacgttttta 56
>RF00906;MIR1122;DQ247832.1/803-901 4487:Aegilops searsii
Length = 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 76 aaaacgtcttacattatgggacggag 101
||||||||||||||||||||||||||
Sbjct: 65 aaaacgtcttacattatgggacggag 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 76 aaaacgtcttacattatgggacg 98
|||||||||||||||||||||||
Sbjct: 36 aaaacgtcttacattatgggacg 14
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 cctccgtctcataatgtaagacgtttt 38
|||||||| ||||||||||||||||||
Sbjct: 91 cctccgtcccataatgtaagacgtttt 65
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaagacgtttt 38
|||||| ||| |||| ||||||||||||||||||
Sbjct: 3 tatactaccttcgtcccataatgtaagacgtttt 36
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaagacgtttt 38
|||||||||||||| |||||||||||||| ||||
Sbjct: 3 tatactccctccgtttcataatgtaagacttttt 36
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaagac 33
||||||||||||||| ||||||||||||||
Sbjct: 125 ttatactccctccgtttcataatgtaagac 96
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaagac 33
||||||||||||||| ||||||||||||||
Sbjct: 159 ttatactccctccgtttcataatgtaagac 130
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 ttatactccctccgtctcataatgtaagac 33
||||||||||||||| ||||||||||||||
Sbjct: 2 ttatactccctccgtttcataatgtaagac 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagac 116
>RF00906;MIR1122;EF426564.1/124146-124054 4571:Triticum turgidum
Length = 93
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagacgttttt 39
||||||||||||| |||||||||||| ||||||
Sbjct: 5 tactccctccgtcccataatgtaagaggttttt 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatgggacggag 101
|||||| ||||||||||||||||||||
Sbjct: 37 aaaaacctcttacattatgggacggag 11
>RF00906;MIR1122;AAAA02006450.1/4529-4668 39946:Oryza sativa
Indica Group
Length = 140
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgta 29
|||||||||||||||||||||||||
Sbjct: 3 tatactccctccgtctcataatgta 27
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 tatactccctccgtctcataatgtaagac 33
|||||||||||||| ||||||||||||||
Sbjct: 126 tatactccctccgtttcataatgtaagac 98
>RF00906;MIR1122;EU660903.1/8169-8251 4565:Triticum aestivum
(bread wheat)
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgtttt 38
||||||||||||| ||||||||||||||||||
Sbjct: 79 tactccctccgtc-cataatgtaagacgtttt 49
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 6 atactccctccgtctcataatgtaagacgtttttataagctatgttag 53
|||||||||||||| |||||| |||||| |||| ||||||||||||
Sbjct: 90 atactccctccgtcccataatataagaccattttgcaagctatgttag 43
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaag 31
||||||||||||||| ||||||||||||
Sbjct: 140 ttatactccctccgtttcataatgtaag 113
>RF00906;MIR1122;AAAA02023717.1/13397-13545 39946:Oryza sativa
Indica Group
Length = 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtctcataatgta 29
||||||||||||||||||||||||
Sbjct: 146 atactccctccgtctcataatgta 123
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaag 31
||||||||||||||| ||||||||||||
Sbjct: 161 ttatactccctccgtttcataatgtaag 134
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaagac 33
||||||||||||| ||||||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagac 31
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagacgtttt 38
|||||||||||| |||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagacttttt 36
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 3 cttatactccctccgtctcataatgtaagac 33
|||||||| ||||||| ||||||||||||||
Sbjct: 162 cttatacttcctccgtttcataatgtaagac 132
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagacgtttt 38
|||||||||||| |||||||||||||| ||||
Sbjct: 158 tactccctccgtttcataatgtaagacttttt 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 cttatactccctccgtctcataatgtaagac 33
|||||||| ||||||| ||||||||||||||
Sbjct: 1 cttatacttcctccgtttcataatgtaagac 31
>RF00906;MIR1122;AM932680.1/129176-129267 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaagacgttttta 40
||||||| ||| || ||||||||||||||||||||
Sbjct: 4 atactccatccatcccataatgtaagacgttttta 38
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 aaaaacgtcttacattatggga 96
||||||||||||||||||||||
Sbjct: 37 aaaaacgtcttacattatggga 16
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagac 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaa 30
||||||||||||||| |||||||||||
Sbjct: 145 ttatactccctccgtttcataatgtaa 119
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 112 tactccctccgtttcataatgtaagac 86
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaagacgtttt 38
||||||||||||||| ||| |||||||||| ||||
Sbjct: 161 ttatactccctccgtttcacaatgtaagacttttt 127
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaag 31
|||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagac 132
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagac 31
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaag 31
|||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AC130607.2/121928-122037 39947:Oryza sativa
Japonica Group
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaag 31
|||||||||||||||||| ||||||||
Sbjct: 3 tatactccctccgtctcaaaatgtaag 29
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagac 132
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagac 121
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaag 31
|||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 4 ttatactccctccgtctcataatgtaagacgtttt 38
||||||||||||||| ||| |||||||||| ||||
Sbjct: 2 ttatactccctccgtttcacaatgtaagacttttt 36
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagac 31
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagac 114
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaagac 33
|||||||||||| ||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagac 132
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||||||||||| ||||
Sbjct: 1 atactccctccgtctcataatataag 26
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||||||||||| ||||
Sbjct: 1 atactccctccgtctcataatataag 26
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtctcataatgtaagacgtt 36
||||||||||||| |||||| |||||||||
Sbjct: 5 tactccctccgtcccataatataagacgtt 34
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||||||||||| ||||
Sbjct: 115 atactccctccgtctcataatataag 90
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa
Japonica Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 tatactccctccgtctcataatgtaagacgtttt 38
|||||||||||||| ||| |||||||||| ||||
Sbjct: 3 tatactccctccgtttcacaatgtaagacttttt 36
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 ttatactccctccgtctcataatgtaagac 33
||||||||||||||| ||| ||||||||||
Sbjct: 161 ttatactccctccgtttcacaatgtaagac 132
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtttcataatgtaag 29
>RF00906;MIR1122;AAAA02005800.1/23183-23322 39946:Oryza sativa
Indica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaaga 32
|||||||||||||||||||| |||||
Sbjct: 136 tactccctccgtctcataatataaga 111
>RF00906;MIR1122;AC130604.4/103163-103007 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||||||||||| ||||
Sbjct: 154 atactccctccgtctcataatataag 129
>RF00906;MIR1122;AP005383.3/77876-77739 39947:Oryza sativa Japonica
Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtctcataatgtaaga 32
|||||||||||||||||||| |||||
Sbjct: 134 tactccctccgtctcataatataaga 109
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtctcataatgtaag 31
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtttcataatgtaag 29
