miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459639.1/39710-39600 4568:Triticum monococcum
Length = 111
Score = 101 bits (51), Expect = 3e-21
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 28 aactactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaana 87
|||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
Sbjct: 110 aactactccctccgtcccataatgtaggacgttttttgacac-tacactagtgtcaaaaa 52
Query: 88 acgtcttaca 97
||||||||||
Sbjct: 51 acgtcttaca 42
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgtttttt 64
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtaagacgtttttt 38
Score = 63.9 bits (32), Expect = 6e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 80 gtcaaanaacgtcttacattatggaacggagggagtatt 118
|||||| ||||||||||||||||| ||||||||||||||
Sbjct: 41 gtcaaaaaacgtcttacattatgggacggagggagtatt 3
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 50 tgtaagacgttttttcacacgtacactagtgtcaaanaacgtcttacattatggaacgga 109
||||||||||||||| |||| || |||||||||| |||||| |||||||||| |||||
Sbjct: 42 tgtaagacgttttttgacac-tagtgtagtgtcaaaaaacgtcctacattatgggacgga 100
Query: 110 gggagta 116
|||||||
Sbjct: 101 gggagta 107
>RF00906;MIR1122;AY663391.1/33436-33528 4571:Triticum turgidum
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||||||||||||||||||||||||||||||| |||| ||| || ||||||| |||
Sbjct: 89 tactccctccgtcccataatgtaagacgttttttgacac-tacgcttatgtcaaaaaaca 31
Query: 91 tcttacattatggaacggagggagta 116
|| || ||||||| ||||||||||||
Sbjct: 30 tcctatattatgggacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaagacgttttttcacacgtacac-tagtgtcaaanaa 88
||||||||||||||||||||| || || ||||||| ||| || | |||||||||| ||
Sbjct: 4 ctactccctccgtcccataatataggatgttttttgaca--taagcgtagtgtcaaaaaa 61
Query: 89 cgtcttacattatggaacggagggagta 116
||||||||||||||| ||||||||||||
Sbjct: 62 cgtcttacattatgggacggagggagta 89
>RF00906;MIR1122;EF426564.1/124146-124054 4571:Triticum turgidum
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||||||||||||||||||||||| ||||||| | || ||||||||||||||| | |
Sbjct: 5 tactccctccgtcccataatgtaagaggttttttgatac-tacactagtgtcaaaaagtg 63
Query: 91 tcttacattatggaacggagggagta 116
||||||||||| | | ||||||||||
Sbjct: 64 tcttacattataggatggagggagta 89
Score = 63.9 bits (32), Expect = 6e-10
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaac 89
||||||||||| ||| |||||||||||| ||||| |||| || |||| ||||| |||
Sbjct: 90 ctactccctccatcctataatgtaagacactttttgacac-tagtgtagtatcaaaaaac 32
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| ||||||||||||
Sbjct: 31 ctcttacattatgggacggagggagta 5
>RF00906;MIR1122;DQ537335.1/54883-54975 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||||||||||||||||||||||||| ||||| |||| ||||||||||| || ||||
Sbjct: 5 tactccctccgtcccataatgtaagacgctttttgacac-tacactagtgtggaaaaacg 63
Query: 91 tcttacattatggaacggagggagta 116
| ||| ||||||| || |||||||||
Sbjct: 64 ttttatattatgggacagagggagta 89
Score = 83.8 bits (42), Expect = 6e-16
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaa 88
||||||||||| |||||||||| ||| |||||||| ||||| || |||||||||| |
Sbjct: 91 actactccctctgtcccataatataaaacgtttttccacac-tagtgtagtgtcaaaaag 33
Query: 89 cgtcttacattatggaacggagggagtat 117
||||||||||||||| |||||||||||||
Sbjct: 32 cgtcttacattatgggacggagggagtat 4
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 79.8 bits (40), Expect = 9e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtc-aaanaac 89
||||||||||||||||||||||||||| |||||| | || ||||||| |||| ||| |||
Sbjct: 90 tactccctccgtcccataatgtaagacattttttaaaac-tacactaatgtcaaaaaaac 32
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| || |||||||||
Sbjct: 31 gtcttacattatgagacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgtttttt 64
||||||||| ||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtctcataatgtaagacgtttttt 38
>RF00906;MIR1122;DQ247823.1/803-901 4487:Aegilops searsii
Length = 99
Score = 69.9 bits (35), Expect = 9e-12
Identities = 75/88 (85%), Gaps = 8/88 (9%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtaca-------ctagtgtca 83
|||| ||| ||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 5 tactaccttcgtcccataatgtaagacgttttttgacac-tacactagtgtctagtgtca 63
Query: 84 aanaacgtcttacattatggaacggagg 111
|| ||||||||||||||||| |||||||
Sbjct: 64 aaaaacgtcttacattatgggacggagg 91
Score = 65.9 bits (33), Expect = 1e-10
Identities = 75/88 (85%), Gaps = 6/88 (6%)
Strand = Plus / Minus
Query: 36 cctccgtcccataatgtaagacgttttttcacac-gtacac-----tagtgtcaaanaac 89
||||||||||||||||||||||||||||| |||| |||| |||||||||| |||
Sbjct: 91 cctccgtcccataatgtaagacgttttttgacactagacactagtgtagtgtcaaaaaac 32
Query: 90 gtcttacattatggaacggagggagtat 117
|||||||||||||| ||| ||| |||||
Sbjct: 31 gtcttacattatgggacgaaggtagtat 4
>RF00906;MIR1122;EU187471.1/291-190 40247:Dasypyrum villosum
Length = 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaagacg-ttttttcacacgtacactagtgtcaaanaa 88
||||| ||||||||||||||||||||||| |||||| |||| ||||||| ||| ||| |
Sbjct: 4 ctacttcctccgtcccataatgtaagacgtttttttgacac-tacactaatgttaaaaga 62
Query: 89 cgtcttacattatggaacgga 109
||||||||||| ||| |||||
Sbjct: 63 cgtcttacattttgggacgga 83
Score = 50.1 bits (25), Expect = 8e-06
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 38 tccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaa-cgtcttac 96
||||||||| |||||||||||| |||| ||| || |||||||||| || ||||||||
Sbjct: 83 tccgtcccaaaatgtaagacgtcttttaacat-tagtgtagtgtcaaaaaaacgtcttac 25
Query: 97 attatggaacggagggagta 116
||||||| ||||||| ||||
Sbjct: 24 attatgggacggaggaagta 5
>RF00906;MIR1122;FJ711031.1/1293-1203 4586:Psathyrostachys juncea
Length = 91
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/91 (85%), Gaps = 3/91 (3%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaac 89
|||||||||| |||||||||| ||||||||||||| |||| || ||||||||| |||
Sbjct: 88 ctactccctctgtcccataatataagacgttttttgacac-tatgacagtgtcaaaaaac 30
Query: 90 gtcttacattatggaacggagggagtattat 120
|||||||| |||| || |||||||||||||
Sbjct: 29 gtcttaca--atgggacagagggagtattat 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 74/86 (86%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
||||||||| ||||||| ||||||||||||||| |||| || |||||||||| ||||
Sbjct: 5 tactccctctgtcccat--tgtaagacgttttttgacactgtca-tagtgtcaaaaaacg 61
Query: 91 tcttacattatggaacggagggagta 116
||||| ||||||| || |||||||||
Sbjct: 62 tcttatattatgggacagagggagta 87
>RF00906;MIR1122;FJ436986.1/65665-65790 37682:Aegilops tauschii
Length = 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 acactagtgtcaaanaacgtcttacattatggaacggagg 111
|||||||||||||| ||||||||||||||||| |||||||
Sbjct: 23 acactagtgtcaaaaaacgtcttacattatgggacggagg 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 36 cctccgtcccataatgtaagacgttttttcacac 69
||||||||||||||||||||||||||||| ||||
Sbjct: 62 cctccgtcccataatgtaagacgttttttgacac 29
>RF00906;MIR1122;AM932680.1/129176-129267 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 63.9 bits (32), Expect = 6e-10
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaa 88
||||||||||||||||||||| |||| |||||||||| ||| || ||||| | || ||
Sbjct: 90 actactccctccgtcccataacgtaatacgttttttcgcac-tagtgtagtg-ctaaaaa 33
Query: 89 cgtcttacattatggaacggagggagtatta 119
||||||||||||||| | ||| |||||||||
Sbjct: 32 cgtcttacattatgggatggatggagtatta 2
Score = 61.9 bits (31), Expect = 2e-09
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||| ||| |||||||||||||||||||||| ||| |||||||||| ||| ||||
Sbjct: 5 tactccatccatcccataatgtaagacgtttttag-cac-tacactagtgcgaaaaaacg 62
Query: 91 tcttacattatggaacggagggagta 116
| |||| |||||| ||||||||||||
Sbjct: 63 tattacgttatgggacggagggagta 88
>RF00906;MIR1122;AB298184.1/14323-14229 4565:Triticum aestivum
(bread wheat)
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/89 (85%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttc--acacgtacactagtgtcaaanaa 88
|||| ||||||||||||||||||||||||||||| |||| || |||||||||||| |
Sbjct: 91 tacttcctccgtcccataatgtaagacgtttttttttacac-tatactagtgtcaaaaga 33
Query: 89 cgtcttacattatggaacggagggagtat 117
| || |||||||||| || | ||||||||
Sbjct: 32 catcctacattatgggacagcgggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 83 aaanaacgtcttacattatggaacggagggagta 116
||| ||||||||||||||||| ||||||| ||||
Sbjct: 58 aaaaaacgtcttacattatgggacggaggaagta 91
>RF00906;MIR1122;EU660903.1/8169-8251 4565:Triticum aestivum (bread
wheat)
Length = 83
Score = 61.9 bits (31), Expect = 2e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 73 cactagtgtcaaanaacgtcttacattatggaacggagggagtatt 118
||||||||||||| |||||| |||||||||| || |||||||||||
Sbjct: 48 cactagtgtcaaaaaacgtcctacattatgggactgagggagtatt 3
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacac 69
||||||||| ||||||||||||| |||||||||| ||||
Sbjct: 5 tactccctcagtcccataatgtaggacgttttttgacac 43
>RF00906;MIR1122;FJ711046.1/1205-1295 220462:Leymus arenarius
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 77/91 (84%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaac 89
||||||| || |||||||||| ||||||||||||| |||| || ||||||||| |||
Sbjct: 4 ctactccttctgtcccataatataagacgttttttgacac-tatgacagtgtcaaaaaac 62
Query: 90 gtcttacattatggaacggagggagtattat 120
|||||||| |||| || |||||||||||||
Sbjct: 63 gtcttaca--atgggacagagggagtattat 91
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/86 (84%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
||||||||| ||||||| ||||||||||||||| |||| || |||||||||| ||||
Sbjct: 87 tactccctctgtcccat--tgtaagacgttttttgacactgtca-tagtgtcaaaaaacg 31
Query: 91 tcttacattatggaacggagggagta 116
||||| ||||||| || || ||||||
Sbjct: 30 tcttatattatgggacagaaggagta 5
>RF00906;MIR1122;DQ247832.1/803-901 4487:Aegilops searsii
Length = 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/88 (82%), Gaps = 8/88 (9%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacacta-------gtgtca 83
|||| ||| ||||||||||||||||||||||| | |||| ||||||| ||||||
Sbjct: 5 tactaccttcgtcccataatgtaagacgttttntgacac-tacactantgtctagtgtca 63
Query: 84 aanaacgtcttacattatggaacggagg 111
| ||||||||||||||||| |||||||
Sbjct: 64 naaaacgtcttacattatgggacggagg 91
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 36 cctccgtcccataatgtaagacgtttt 62
|||||||||||||||||||||||||||
Sbjct: 91 cctccgtcccataatgtaagacgtttt 65
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/87 (83%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||||||||||||||||| ||||| ||||| |||| ||||| |||| |||| |
Sbjct: 89 tactccctccgtcccataatataagaacatttttgacac-tacaccagtgccaaaaatgc 31
Query: 91 tcttacattatggaacggagggagtat 117
||||| |||||||||| ||||||||||
Sbjct: 30 tcttatattatggaacagagggagtat 4
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
|||||||||||||||||||| ||||| ||||| |||| | ||||||||||||| |
Sbjct: 89 tactccctccgtcccataatataagagcgtttttgacac-tgcactagtgtcaaaaacgc 31
Query: 91 tcttacattatggaacggaggga 113
||||| ||||||| |||||||||
Sbjct: 30 tcttatattatgggacggaggga 8
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 102
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaagacgtt 60
||||||||||||||||||||| |||||||||
Sbjct: 4 ctactccctccgtcccataatataagacgtt 34
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 87 aacgtcttacattatggaacggagggagta 116
||||||||| ||||||| ||||||||||||
Sbjct: 34 aacgtcttatattatgggacggagggagta 5
>RF00906;MIR1122;AF343492.1/1298-1206 58531:Aegilops speltoides
subsp. speltoides
Length = 93
Score = 54.0 bits (27), Expect = 5e-07
Identities = 74/86 (86%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaac 89
||||||||||||||||||||| ||| | ||||| |||| ||||||||||| ||| |||
Sbjct: 90 ctactccctccgtcccataatataaaagcgtttttgacac-tacactagtgt-aaaaaac 33
Query: 90 g-tcttacattatggaacggagggag 114
| ||||| ||||||| ||||||||||
Sbjct: 32 gttcttatattatgggacggagggag 7
>RF00906;MIR1122;EF115142.1/468-377 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 76 tagtgtcaaanaacgtcttacattatggaacggagggagta 116
|||||||||| ||||||||| |||||| ||||||||||||
Sbjct: 48 tagtgtcaaaaaacgtcttatattatgttacggagggagta 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacac 69
|||||||||||| |||||| ||||||||||||| ||||
Sbjct: 88 tactccctccgtaacataatataagacgttttttgacac 50
>RF00906;MIR1122;EF397435.1/125-217 4588:Lophopyrum elongatum
Length = 93
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagacgttttt 63
||||||||| ||||||||||||||||||||||
Sbjct: 89 tactccctctatcccataatgtaagacgttttt 57
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 38 tccgtcccataatgtaagacgttttt 63
||||||||||||||||| ||||||||
Sbjct: 12 tccgtcccataatgtaatacgttttt 37
>RF00906;MIR1122;FJ374604.1/80-162 4573:Aegilops speltoides
Length = 83
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 28 aactactccctccgtcccataatgtaaga 56
||||||||||||||||||||||| |||||
Sbjct: 2 aactactccctccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 27 caactactccctccgtcccataatgtaaga 56
||||| |||||||||||||||||| |||||
Sbjct: 83 caactcctccctccgtcccataatataaga 54
>RF00906;MIR1122;EU626553.1/26077-25985 4572:Triticum urartu
Length = 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 72/87 (82%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
||||||||| |||||||||| ||||| ||||| ||| ||||||||||||| | |
Sbjct: 5 tactccctctgtcccataatataagaacgtttttggcac-tacactagtgtcagaaacgt 63
Query: 91 tcttacattatggaacggagggagtat 117
||||| ||||||| |||||||||||||
Sbjct: 64 tcttatattatgggacggagggagtat 90
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagtat 4
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 96 gtcttacattatgaaacggagggagtat 123
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 130 gtcttacattatgaaacggagggagtat 157
>RF00906;MIR1122;AAAA02003711.1/12163-12287 39946:Oryza sativa
Indica Group
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 28 aactactccctccgtcccataatgtaag 55
||||||||||||||||||||||| ||||
Sbjct: 2 aactactccctccgtcccataatataag 29
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagtat 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 116 gtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AACV01010936.1/15061-14959 39947:Oryza sativa
Japonica Group
Length = 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgta 53
||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccataatgta 27
>RF00906;MIR1122;AAAA02015439.1/1131-1234 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgta 53
||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccataatgta 27
>RF00906;MIR1122;AP003239.3/11814-11971 39947:Oryza sativa Japonica
Group
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgt 52
||||||||||||||||||||||||
Sbjct: 156 actactccctccgtcccataatgt 133
>RF00906;MIR1122;AACV01021120.1/13659-13774 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgta 53
||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccataatgta 27
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgta 53
||||||||||||||||||||||||
Sbjct: 113 ctactccctccgtcccataatgta 90
>RF00906;MIR1122;AP008207.1/20312711-20312849 39947:Oryza sativa
Japonica Group
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgt 52
||||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccataatgt 26
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 28 aactactccctccgtcccataatgtaag 55
||||||||||||||||||||||| ||||
Sbjct: 2 aactactccctccgtcccataatataag 29
>RF00906;MIR1122;AP008212.1/30480161-30480258 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgt 52
||||||||||||||||||||||||
Sbjct: 96 actactccctccgtcccataatgt 73
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
>RF00906;MIR1122;AACV01001496.1/5025-4887 39947:Oryza sativa
Japonica Group
Length = 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgt 52
||||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccataatgt 26
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgtaaga 56
|||||||||||||||||||||| |||||
Sbjct: 115 actactccctccgtcccataatataaga 88
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtatta 119
|||||||| |||||||||||||||||||
Sbjct: 29 cttacattgtggaacggagggagtatta 2
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagtat 117
||||||||||||| ||||||||||||||
Sbjct: 98 gtcttacattatgaaacggagggagtat 125
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaaga 56
||||||||||||||||||||| |||||
Sbjct: 244 ctactccctccgtcccataatataaga 218
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF00906;MIR1122;AC161407.5/87285-87421 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||| ||||||||
Sbjct: 135 actactccctccgtcccaaaatgtaag 109
>RF00906;MIR1122;AY013246.1/69877-69969 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 71/86 (82%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacg 90
||||||||| ||| |||||| ||||| ||||| |||| ||||||| ||||||| |
Sbjct: 5 tactccctctgtctcataatataagagcgtttttgacac-tacactaatgtcaaaaatgc 63
Query: 91 tcttacattatggaacggagggagta 116
||||| ||||||| ||||||||||||
Sbjct: 64 tcttatattatgggacggagggagta 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaaga 56
||||||||||||||||||||| |||||
Sbjct: 90 ctactccctccgtcccataatataaga 64
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaagac 57
|||||||||||||||||||| ||||||
Sbjct: 89 tactccctccgtcccataatataagac 63
>RF00906;MIR1122;EF059989.1/226094-226187 29664:Brachypodium
sylvaticum
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 ttatggaacggagggagtattat 120
|||||||||||||||||||||||
Sbjct: 72 ttatggaacggagggagtattat 94
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||||||| ||||
Sbjct: 155 actactccctccgtcccataatataag 129
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 86 gtcttacattatgaaacggagggagta 112
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 132 gtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC105928.2/150423-150279 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgt 52
|||||||||||||||||||||||
Sbjct: 142 ctactccctccgtcccataatgt 120
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||||||| ||||
Sbjct: 3 actactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaaga 56
||||||||||||||||||||| |||||
Sbjct: 136 ctactccctccgtcccataatataaga 110
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02039729.1/233-133 39946:Oryza sativa Indica
Group
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgt 52
|||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccataatgt 26
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaaga 56
||||||||||||||||||||| |||||
Sbjct: 115 ctactccctccgtcccataatataaga 89
>RF00906;MIR1122;AAAA02010985.1/48487-48349 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgt 52
|||||||||||||||||||||||
Sbjct: 136 ctactccctccgtcccataatgt 114
>RF00906;MIR1122;AP008211.1/18929382-18929520 39947:Oryza sativa
Japonica Group
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 caactactccctccgtcccataa 49
|||||||||||||||||||||||
Sbjct: 139 caactactccctccgtcccataa 117
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 132 gtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 121 gtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AAAA02007747.1/9703-9846 39946:Oryza sativa Indica
Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tacattatggaacggagggagta 116
|||||||||||||||||||||||
Sbjct: 118 tacattatggaacggagggagta 140
>RF00906;MIR1122;AP005510.3/22168-22263 39947:Oryza sativa
Japonica Group
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||| ||||||||
Sbjct: 3 actactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 caactactccctccgtcccataa 49
|||||||||||||||||||||||
Sbjct: 156 caactactccctccgtcccataa 134
>RF00906;MIR1122;AP004361.4/1077-1207 39947:Oryza sativa Japonica
Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgt 52
|||||||||||||||||||||||
Sbjct: 128 ctactccctccgtcccataatgt 106
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 95 acattatggaacggagggagtattat 120
|||||||||||||||| |||||||||
Sbjct: 26 acattatggaacggagagagtattat 1
>RF00906;MIR1122;AP008209.1/1122239-1122380 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 94 tacattatggaacggagggagta 116
|||||||||||||||||||||||
Sbjct: 27 tacattatggaacggagggagta 5
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||||||| ||||
Sbjct: 3 actactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 31 gtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 caactactccctccgtcccataa 49
|||||||||||||||||||||||
Sbjct: 156 caactactccctccgtcccataa 134
>RF00906;MIR1122;AAAA02008004.1/32040-31914 39946:Oryza sativa
Indica Group
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgt 52
|||||||||||||||||||||||
Sbjct: 124 ctactccctccgtcccataatgt 102
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 114 gtcttacattatgaaacggagggagta 140
>RF00906;MIR1122;AACV01018737.1/24214-24370 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgtaag 55
|||||||||||||||||||||| ||||
Sbjct: 3 actactccctccgtcccataatataag 29
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 132 gtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaaga 56
||||||||||||||||||||| |||||
Sbjct: 116 ctactccctccgtcccataatataaga 90
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagta 116
||||||||||||| |||||||||||||
Sbjct: 132 gtcttacattatgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 28 aactactccctccgtcccataatgtaagac 57
||||||||||||||| |||||||||||||
Sbjct: 161 aactactccctccgtttcataatgtaagac 132
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 238 ctactccctccgtcccataatataag 213
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica
Group
Length = 242
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 243 ctactccctccgtcccataatataag 218
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 238 tactccctccgtcccataatataaga 213
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 2 tactccctccgtcccataatataaga 27
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 241 ctactccctccgtcccataatataag 216
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 245 ctactccctccgtcccataatataag 220
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 2 tactccctccgtcccataatataaga 27
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 233 ctactccctccgtcccataatataag 208
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
|||| |||||||||||||||||||||
Sbjct: 26 cttatattatggaacggagggagtat 1
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa
Indica Group
Length = 244
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 1 ctactccctccgtcccataatataag 26
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;X80068.1/1038-939 4513:Hordeum vulgare
Length = 100
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AY196347.1/5474-5564 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 91
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaagacgttttt 63
||||||||||||||||| ||| ||||| ||||||
Sbjct: 88 ctactccctccgtcccacaatataagatgttttt 55
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 67 tactccctccgtcccataatataaga 42
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 91 tcttacattatggaacggagggagta 116
||||| ||||||||||||||||||||
Sbjct: 30 tcttatattatggaacggagggagta 5
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;EU730898.1/63863-63739 15368:Brachypodium
distachyon
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 97 attatggaacggagggagtatt 118
||||||||||||||||||||||
Sbjct: 24 attatggaacggagggagtatt 3
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 90 gtcttacattatggaacggagggagtatta 119
||||||||||||| ||||||| ||||||||
Sbjct: 111 gtcttacattatgaaacggagagagtatta 140
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataatgtaagacg 58
||||||||||| |||||||||| |||||||
Sbjct: 3 actactccctctgtcccataatataagacg 32
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 113 cttacattatgaaacggagggagtat 138
>RF00906;MIR1122;AACV01006039.1/12119-12209 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||| ||||||||
Sbjct: 4 ctactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02003912.1/60341-60484 39946:Oryza sativa
Indica Group
Length = 144
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 134 cttacattatgaaacggagggagtat 159
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 118 tactccctccgtcccataatataaga 93
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 130 tactccctccgtcccataatataaga 105
>RF00906;MIR1122;AC105731.2/34053-33963 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AP008215.1/20036672-20036557 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||| ||||||||
Sbjct: 4 ctactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 153 tactccctccgtcccataatataaga 128
>RF00906;MIR1122;AAAA02008915.1/13725-13567 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataat 50
||||||||||||||||||||||
Sbjct: 157 actactccctccgtcccataat 136
>RF00906;MIR1122;AAAA02027487.1/4806-4726 39946:Oryza sativa
Indica Group
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 77 tactccctccgtcccataatataaga 52
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 tcttacattatggaacggagggagta 116
||||| ||||||||||||||||||||
Sbjct: 107 tcttatattatggaacggagggagta 132
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01020013.1/4046-4126 39947:Oryza sativa
Japonica Group
Length = 81
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 77 tactccctccgtcccataatataaga 52
>RF00906;MIR1122;AACV01014972.1/11020-11117 39947:Oryza sativa
Japonica Group
Length = 98
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 94 tactccctccgtcccataatgt 73
>RF00906;MIR1122;AP008208.1/20971646-20971521 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgt 26
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 122 tactccctccgtcccataatgt 101
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 143 tactccctccgtcccataatataaga 118
>RF00906;MIR1122;AAAA02006653.1/17498-17400 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgt 52
||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccataatgt 74
>RF00906;MIR1122;AC140005.2/42932-42813 39947:Oryza sativa Japonica
Group
Length = 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 117 ctactccctccgtcccataatataag 92
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtcccaaaatgtaag 77
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AP006461.3/116161-116316 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataat 50
||||||||||||||||||||||
Sbjct: 154 actactccctccgtcccataat 133
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 136 tactccctccgtcccataatataaga 111
>RF00906;MIR1122;AP008216.1/5042324-5042220 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 102 ctactccctccgtcccataatataag 77
>RF00906;MIR1122;AP008214.1/337131-337286 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataat 50
||||||||||||||||||||||
Sbjct: 154 actactccctccgtcccataat 133
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtcccaaaatgtaag 77
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 92 cttacattatggaacggagggagtat 117
||||||||||| ||||||||||||||
Sbjct: 29 cttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 153 tactccctccgtcccataatataaga 128
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 tactccctccgtcccataatgtaaga 56
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AP003940.3/16183-16061 39947:Oryza sativa
Japonica Group
Length = 123
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 ctactccctccgtcccataatgtaag 55
||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgtcccataatataag 29
>RF00906;MIR1122;AP004031.3/125858-125981 39947:Oryza sativa
Japonica Group
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 29 actactccctccgtcccataat 50
||||||||||||||||||||||
Sbjct: 122 actactccctccgtcccataat 101
>RF00906;MIR1122;AP002485.2/92019-92165 39947:Oryza sativa
Japonica Group
Length = 147
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 actactccctccgtcccataat 50
||||||||||||||||||||||
Sbjct: 3 actactccctccgtcccataat 24
