miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 163 bits (82), Expect = 1e-39
Identities = 150/168 (89%), Gaps = 6/168 (3%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttcaa-atggaatacaacata 73
|||||||||||||||||||||||||||||||||||| |||| || |||| || |||||
Sbjct: 167 atactccctccgttcctaaatataagtctttttagagatttgaatatgg---actacata 111
Query: 74 cggatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtca 133
|||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cggatgaatatagacgtattttagagtgtagattcactcattttgctccgtatgtagtc- 52
Query: 134 cttgttgggaatctctagaaagacttatatttgggaacggagggagta 181
| | || ||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 51 catatt-agaatctctaaaaagacttatatttaggaacagagggagta 5
Score = 63.9 bits (32), Expect = 8e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 143 aatctctagaaagacttatatttgggaacggagggagtat 182
|||||||| |||||||||||||| ||||||||||||||||
Sbjct: 128 aatctctaaaaagacttatatttaggaacggagggagtat 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaga 50
||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttaga 39
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 143 bits (72), Expect = 1e-33
Identities = 146/167 (87%), Gaps = 4/167 (2%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatacg 75
||||||||||||||||||||||||||||||||||| ||||| | | | || |||| ||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcac-tagtagactacattcg 59
Query: 76 gatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtc-ac 134
||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct: 60 gatgtatatagacatattttagaatatagattcactcattttgctccgtatgtagtcgtc 119
Query: 135 ttgttgggaatctctagaaagacttatatttgggaacggagggagta 181
| | | |||||||| |||||||||||||| |||||||||||||||
Sbjct: 120 tag--cgaaatctctaaaaagacttatatttaggaacggagggagta 164
Score = 73.8 bits (37), Expect = 8e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttc 56
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttc 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 146 ctctagaaagacttatatttgggaacggagggagta 181
||||| |||||||||||||| |||||||||||||||
Sbjct: 36 ctctaaaaagacttatatttaggaacggagggagta 1
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 137 bits (69), Expect = 6e-32
Identities = 147/169 (86%), Gaps = 8/169 (4%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttca--aatggaatacaacata 73
|||||||||||||||||||||||||||||| |||| |||||| ||||| || |||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatgg---actacata 108
Query: 74 cggatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtca 133
||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 107 cggatgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagaca 48
Query: 134 -cttgttgggaatctctagaaagacttatatttgggaacggagggagta 181
|| || | |||| || |||||||||||||| |||||||||||||||
Sbjct: 47 tctagt--gaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttt 46
|||||||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttt 31
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 143 aatctctagaaagacttatatttgggaacggagggagta 181
|||||||| |||||||||||||| |||||||||||||||
Sbjct: 126 aatctctacaaagacttatatttaggaacggagggagta 164
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 109 bits (55), Expect = 1e-23
Identities = 142/167 (85%), Gaps = 3/167 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatacg 75
||||||||||||||||||||||||||||||||||| |||| | | | || |||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttc-actaggggactacatacg 107
Query: 76 gatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtcact 135
||||||| |||||||| ||||||| |||||||||||||||||||| ||||||| | ||
Sbjct: 106 gatgtatatagacata-cttagagtacagattcactcattttgctccatatgtagcccct 48
Query: 136 tgttgggaatctctagaaagacttatatttgggaacggagggagtat 182
| | |||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 47 t-agagaaatctctaaaaagacttacatttaggaacggagggagtat 2
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttc 56
||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 2 atactccctccgttcctaaatgtaagtctttttagagatttc 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 147 tctagaaagacttatatttgggaacggagggagta 181
|||| |||||||||||||| |||||||||||||||
Sbjct: 131 tctaaaaagacttatatttaggaacggagggagta 165
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 105 bits (53), Expect = 2e-22
Identities = 103/117 (88%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatacg 75
||||||||||||||||||||||||| | ||||||| ||| | | || || |||||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagattgtac-tataa-actacatacg 58
Query: 76 gatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtc 132
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 59 gatgtacatagacatattttagagtatagattcactcattttgctccgtatgtagtc 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 143 aatctctagaaagacttatatttgggaacggagggagta 181
|||||||| || | ||||||||| |||||||||||||||
Sbjct: 39 aatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttttag 49
|||||||||||||||| ||||||||| | ||||||
Sbjct: 164 atactccctccgttccaaaatataagaccttttag 130
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 101 bits (51), Expect = 4e-21
Identities = 141/168 (83%), Gaps = 6/168 (3%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaa-atggaatacaacatac 74
|||||||||| ||||||||||||||||||| |||| |||||| ||||| | ||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcactatgga---ccacatac 107
Query: 75 ggatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtcac 134
||||||||||||| |||||||||| ||| |||||||||||| |||||||||| |||
Sbjct: 106 ggatgtatgtagatgcattttagagtataggttcactcattttactccgtatgtggtcca 47
Query: 135 ttgttgggaatctctagaaagacttatatttgggaacggagggagtat 182
| | | ||||| | |||||||||||||| ||||||||||||||||
Sbjct: 46 taat--gaaatctgtccaaagacttatatttaggaacggagggagtat 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatataagtcttt 31
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 143 aatctctagaaagacttatatttgggaacggagggagta 181
|||||||| |||||||||||||| |||| ||||||||||
Sbjct: 125 aatctctacaaagacttatatttaggaatggagggagta 163
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 97.6 bits (49), Expect = 6e-20
Identities = 102/117 (87%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatacg 75
||||||||||||||||||||||||| | ||||||| ||| | | || || |||||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagattgtac-tataa-actacatacg 61
Query: 76 gatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtc 132
|||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 62 gatgtacatagacatattttagagtatagattcgctcattttgctccgtatgtagtc 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 143 aatctctagaaagacttatatttgggaacggagggagta 181
|||||||| || | ||||||||| |||||||||||||||
Sbjct: 42 aatctctaaaaggtcttatatttaggaacggagggagta 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttag 49
||||||||||||||| ||||||||| | ||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttag 133
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 97.6 bits (49), Expect = 6e-20
Identities = 102/117 (87%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatacg 75
||||||||||||||||||||||||| | ||||||| || ||| | || || |||||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcac-tataa-actacatacg 59
Query: 76 gatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtc 132
||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 60 gatgtatgtagtcatattttgggatgtaaattcactcattttgctccgtatgtagtc 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttca 57
||||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttca 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 144 atctctagaaagacttatatttgggaacggagggagta 181
||||||| || | ||||||||| |||||||||||||||
Sbjct: 39 atctctaaaaggtcttatatttaggaacggagggagta 2
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/91 (89%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 91 attttagagtgtagattcactcattttgctccgtatgtagtcacttgttgggaatctcta 150
|||||||||||||||||||||||||||||| ||||||||||| | || | ||||||||
Sbjct: 73 attttagagtgtagattcactcattttgcttcgtatgtagtccatagt--gaaatctcta 130
Query: 151 gaaagacttatatttgggaacggagggagta 181
| |||||||||||| |||||||||||||||
Sbjct: 131 cagagacttatatttaggaacggagggagta 161
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 141 ggaatctctagaaagacttatatttgggaacggagggagta 181
|||||||||| |||||||||||||| |||||||||||||||
Sbjct: 45 ggaatctctacaaagacttatatttaggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttca 57
|||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttca 120
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 91.7 bits (46), Expect = 3e-18
Identities = 140/167 (83%), Gaps = 7/167 (4%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttca-aatggaatacaacatac 74
||||||||||||||||||||||||||||| |||| |||||| ||| || ||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcactgtgg---accacatac 109
Query: 75 ggatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtcac 134
|||||||| |||| |||||| ||||||||||||||||||| |||||||||| |||
Sbjct: 108 ggatgtatatagatgcatttta-tgtgtagattcactcatttttctccgtatgtggtcta 50
Query: 135 ttgttgggaatctctagaaagacttatatttgggaacggagggagta 181
| || | ||||||| |||||||||||||| |||||||||||||||
Sbjct: 49 tagt--gaaatctctccaaagacttatatttaggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtcttt 45
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 aagacttatatttgggaacggagggagta 181
||||||||||||| |||||||||||||||
Sbjct: 137 aagacttatatttaggaacggagggagta 165
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 103 agattcactcattttgctccgtatgtagtcacttgttgggaatctctagaaagacttata 162
|||||||||||||||||||||||||||||| | || | |||||||| |||||||||||
Sbjct: 81 agattcactcattttgctccgtatgtagtccatagt--gtaatctctaaaaagacttata 24
Query: 163 tttgggaacggagggagtata 183
||| |||||||||||||||||
Sbjct: 23 tttaggaacggagggagtata 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtctttttaga 50
||||||||||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataagtctttttaga 39
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 20 ccctccgttcctaaatataagtctttttaga 50
||||||||||||||||||||||| |||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttaga 81
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 142 gaatctctagaaagacttatatttgggaacggaggg 177
||||||||| || ||||||||||| |||||||||||
Sbjct: 76 gaatctctaaaaggacttatatttaggaacggaggg 111
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttca 57
|||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 152 atactccctccgttcctaaatataagtcttttaagatatttca 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataagtcttt 34
Score = 61.9 bits (31), Expect = 3e-09
Identities = 68/78 (87%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 109 actcattttgctccgtatgtagtc-acttgttgggaatctctagaaagacttatatttgg 167
|||||||||||||||||||||| | ||| || | ||| ||| |||||||||||||| |
Sbjct: 80 actcattttgctccgtatgtagactactagt--gaaatatcttaaaagacttatatttag 137
Query: 168 gaacggagggagtatatt 185
||||||||||||||||||
Sbjct: 138 gaacggagggagtatatt 155
Score = 58.0 bits (29), Expect = 5e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 152 aaagacttatatttgggaacggagggagtatat 184
|||||||||||||| ||||||||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagtatat 2
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 65.9 bits (33), Expect = 2e-10
Identities = 135/167 (80%), Gaps = 4/167 (2%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttcaaatggaatacaacatac 74
|||||||||||||||||||||||||| | |||||| ||| || ||| | ||||||
Sbjct: 167 atactccctccgttcctaaatataagaccttttaggtattacactatgaa--ctacatac 110
Query: 75 ggatgtatgtagacatattttagagtgtagattcactcattttgctccgtatgtagtcac 134
|||||||| |||||||||||||| || ||| || | | ||||| |||||||||||||
Sbjct: 109 ggatgtatatagacatattttagggtataggtttatttgttttgttccgtatgtagtcca 50
Query: 135 ttgttgggaatctctagaaagacttatatttgggaacggagggagta 181
| || |||| |||| || | ||||||||| |||||||||||||||
Sbjct: 49 tagt--agaatttctaaaaggtcttatatttaggaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttaga 50
||||||||||||||||||||||||| | |||||||
Sbjct: 5 tactccctccgttcctaaatataagaccttttaga 39
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 cttatatttgggaacggagggagtat 182
||||||||| ||||||||||||||||
Sbjct: 142 cttatatttaggaacggagggagtat 167
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 142 gaatctctagaaagacttatatttgggaacggagggagtatat 184
|||||| | ||||||||||||||| ||||||||||||||||||
Sbjct: 99 gaatctttcgaaagacttatatttaggaacggagggagtatat 141
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtcttt 45
|||||||||||||||||||||||||||||||
Sbjct: 139 atactccctccgttcctaaatataagtcttt 109
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttca 57
||||||||||||| | |||||||||||||||| ||| ||||||
Sbjct: 4 atactccctccgtacttaaatataagtcttttaagatatttca 46
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 143 aatctctagaaagacttatatttgggaacggagggagtat 182
||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 43 aatctttagaaagacttatatttaggaaaggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtcttt 45
||||||||||| |||||||||||||||||||
Sbjct: 4 atactccctcctttcctaaatataagtcttt 34
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatataag 29
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 157 cttatatttgggaacggagggagtatat 184
||||||||| ||||||||||||||||||
Sbjct: 29 cttatatttaggaacggagggagtatat 2
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 157 cttatatttgggaacggagggagtatatt 185
||||||||| |||||||||||||||||||
Sbjct: 94 cttatattttggaacggagggagtatatt 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||||| |||||||||
Sbjct: 119 atactccctccgttccaaaatataag 94
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataa 39
|||||||||||||||||||||||||
Sbjct: 116 atactccctccgttcctaaatataa 92
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 158 ttatatttgggaacggagggagtatatt 185
|||||||| |||||||||||||||||||
Sbjct: 92 ttatatttaggaacggagggagtatatt 119
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tcatactccctccgttcctaaatataag 40
|||||||||||| |||||||||||||||
Sbjct: 2 tcatactccctctgttcctaaatataag 29
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataag 40
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AAAA02026044.1/32315-32427 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 157 cttatatttgggaacggagggagtatat 184
|||||||||||| |||||||||||||||
Sbjct: 29 cttatatttggggacggagggagtatat 2
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatata 38
||||||||||||||||||||||||
Sbjct: 4 atactccctccgttcctaaatata 27
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 159 tatatttgggaacggagggagtatatt 185
||||||| |||||||||||||||||||
Sbjct: 27 tatatttaggaacggagggagtatatt 1
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 actccctccgttcctaaatataag 40
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 239 atactccctccgttcctaaatat 217
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatat 37
|||||||||||||||||||||||
Sbjct: 1 atactccctccgttcctaaatat 23
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtctttttagacatttcaaatg 61
||||||||||| || ||||||| |||||| |||||||||||||||
Sbjct: 4 atactccctccatttttaaatatttgtctttctagacatttcaaatg 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttagacatttcaa 58
||||||||||||||||||||| |||||| ||| ||||||||
Sbjct: 100 tactccctccgttcctaaatacttgtctttctaggcatttcaa 58
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatata 38
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagtctttttag 49
||||||||||||| || |||||||||| |||||||
Sbjct: 107 atactccctccgtcccaaaatataagtatttttag 73
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataagtctttttag 49
||||||||||||| || |||||||||| |||||||
Sbjct: 4 atactccctccgtcccaaaatataagtatttttag 38
>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataagt 41
|||||| ||||||||||||||||||||
Sbjct: 147 atactcactccgttcctaaatataagt 121
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 catactccctccgttcctaaatataag 40
||||||||||||||||| |||||||||
Sbjct: 93 catactccctccgttccaaaatataag 67
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 cttatatttgggaacggagggagtat 182
||||||||| ||||||||||||||||
Sbjct: 67 cttatattttggaacggagggagtat 92
>RF00906;MIR1122;AACV01007572.1/20450-20296 39947:Oryza sativa
Japonica Group
Length = 155
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 catactccctccgttcctaaatataag 40
|||||||||||||| ||||||||||||
Sbjct: 153 catactccctccgtccctaaatataag 127
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatat 37
||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatat 23
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||||| |||||||||
Sbjct: 154 atactccctccgttccaaaatataag 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 cttatatttgggaacggagggagtat 182
||||||||| ||||||||||||||||
Sbjct: 129 cttatattttggaacggagggagtat 154
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 156 acttatatttgggaacggagggagta 181
|||||||||| |||||||||||||||
Sbjct: 30 acttatattttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagt 41
||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccaaaatataagt 30
>RF00906;MIR1122;CT030168.3/87017-87173 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtttctaaatataag 29
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||| |||||||||||
Sbjct: 154 atactccctccgtttctaaatataag 129
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
|||||||||||||||| |||||||||
Sbjct: 152 atactccctccgttccaaaatataag 127
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 cttatatttgggaacggagggagtat 182
||||||||| ||||||||||||||||
Sbjct: 127 cttatattttggaacggagggagtat 152
>RF00906;MIR1122;ABXC01003117.1/17769-17632 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 13 tcatactccctccgttcctaaatataagtc 42
|||||||||||||||||| || ||||||||
Sbjct: 2 tcatactccctccgttccaaattataagtc 31
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaata 36
||||||||||||||||||||||
Sbjct: 91 atactccctccgttcctaaata 70
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 atcatactccctccgttcctaaatataagtctttttag 49
||||||||||||||||| | |||||||||| ||||||
Sbjct: 143 atcatactccctccgtttcacaatataagtcattttag 106
>RF00906;MIR1122;AACV01003381.1/5259-5104 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02005173.1/305-150 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02035149.1/48296-48436 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 138 atactccctccgtccctaaatataag 113
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 ctagaaagacttatatttgggaacggagggagta 181
|||||| |||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP005896.3/119867-120022 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 atcatactccctccgttcctaaatataagtctttttag 49
||||||||||||||||| | |||||||||| ||||||
Sbjct: 156 atcatactccctccgtttcacaatataagtcattttag 119
>RF00906;MIR1122;AACV01013612.1/22689-22534 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 153 atactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttag 49
|||||||||||||| |||||||||| |||||||
Sbjct: 5 tactccctccgttctaaaatataagtatttttag 38
>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagt 41
|||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105
>RF00906;MIR1122;AACV01019437.1/5367-5506 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 137 atactccctccgtccctaaatataag 112
>RF00906;MIR1122;AAAA02021933.1/10251-10131 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 118 atactccctccgtccctaaatataag 93
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttag 49
|||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagtatttttag 75
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgttcctaaatataagtctttttag 49
|||||||||||| || |||||||||| |||||||
Sbjct: 96 tactccctccgtcccaaaatataagtatttttag 63
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgttcctaaatataagtctttttag 49
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaatataagtatttttag 38
>RF00906;MIR1122;AP006458.4/60963-61093 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 128 atactccctccgtccctaaatataag 103
>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtccctaaatataag 29
>RF00906;MIR1122;AC087851.4/84630-84468 4530:Oryza sativa (rice)
Length = 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 atactccctccgttcctaaatataag 40
||||||||||||| ||||||||||||
Sbjct: 160 atactccctccgtccctaaatataag 135
