miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 145 bits (73), Expect = 1e-34
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| ||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||||||||||||||| |||| |||| ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 133 bits (67), Expect = 4e-31
Identities = 82/87 (94%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactc 66
|||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 67 ttatattagttcacggagggagtacca 93
|||||||| || |||||||||||||||
Sbjct: 28 ttatattaatttacggagggagtacca 2
Score = 79.8 bits (40), Expect = 6e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||| ||||||||||| |||| |||||||| |||| |||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 66 cttatattagttcacggagggagt 89
|||||||||||| || ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 129 bits (65), Expect = 7e-30
Identities = 80/85 (94%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| ||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||| |||||||| |||| |||| ||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 66 cttatattagttcacggagggagtac 91
||||||||||| || ||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 127 bits (64), Expect = 3e-29
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgc 63
Query: 65 tcttatattagttcac 80
||||||||||||||||
Sbjct: 64 tcttatattagttcac 79
Score = 89.7 bits (45), Expect = 6e-18
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||| ||| |||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||||||| |||| |||| ||||||||| |||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| ||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||| ||||||||||||| || | || |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| ||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 115 bits (58), Expect = 1e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 66 cttatattagttcacggagggagtac 91
|||||||||||| || ||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 66 cttatattagttcacggagggagta 90
||||||||| || ||||||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
|||||||||| ||||| |||||||||||||||||||| |||| |||| |||||||| |
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 65 tcttatattagttcacggagggagta 90
||||||| ||||| || || ||||||
Sbjct: 64 tcttatagtagtttacagacggagta 89
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 119 bits (60), Expect = 7e-27
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 66 cttatattagttcacggagg 85
|||||||||||| |||||||
Sbjct: 65 cttatattagtttacggagg 84
Score = 79.8 bits (40), Expect = 6e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttat 70
|||| ||||||||||||||||||||||||||||||| |||| ||| |||| |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attagttcacggagggagta 90
|||| || || |||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
|||||||||||||||||||||||||||||| ||||||||||| |||| |||||| | |
Sbjct: 4 atactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgc 63
Query: 65 tcttatattagttcacggagggagta 90
||||||||||||| || |||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||| ||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| ||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 66 cttatattagttcacggagggagtac 91
|||||||| ||| | ||||||||||
Sbjct: 29 cttatattggtttatagagggagtac 4
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 109 bits (55), Expect = 6e-24
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 66 cttatattagttcacggagggagtacc 92
||||||||||| ||||||||||||||
Sbjct: 29 tttatattagtttacggagggagtacc 3
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 109 bits (55), Expect = 6e-24
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 66 cttatattagttcacggagggagtac 91
||||||||||| |||||||||||||
Sbjct: 63 attatattagtttacggagggagtac 88
Score = 85.7 bits (43), Expect = 9e-17
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||| |||||||||| |||| |||| |||||||||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 66 cttatattagttcacggagggagtac 91
|||||||||||| || ||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 109 bits (55), Expect = 6e-24
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||| || |||||||| ||||||||||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 66 cttatattagttcacggagggagtac 91
|||||||||||| |||||||||||||
Sbjct: 63 cttatattagtttacggagggagtac 88
Score = 85.7 bits (43), Expect = 9e-17
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 66 cttatattagttcacggagggagtac 91
||||||||||| || ||||||||||
Sbjct: 29 tttatattagtttacagagggagtac 4
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 81/90 (90%)
Strand = Plus / Minus
Query: 2 catatactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaa 61
|||||||||||||||||||||||||||| || |||| || |||||| |||| |||||||
Sbjct: 93 catatactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaa 34
Query: 62 cactcttatattagttcacggagggagtac 91
|||||||||||||||| || ||||||||||
Sbjct: 33 cactcttatattagtttacagagggagtac 4
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 66 cttatattagttcacggagggagta 90
||||||||||| || |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
||||| ||||||||||||||||||||||| |||||||||||| |||| | |||||| |
Sbjct: 90 atacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgc 31
Query: 65 tcttatattagttcacggagggagtac 91
||||||||||||| |||||||||||||
Sbjct: 30 tcttatattagtttacggagggagtac 4
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactctt 68
||||| |||||||||||||||||||||| |||||| |||||| || |||||||| |||||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 69 atattagttcacggagggagt 89
||||||||| |||||||||||
Sbjct: 68 atattagtttacggagggagt 88
Score = 61.9 bits (31), Expect = 1e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactc 66
|||||||| ||||||||||||||||| ||||||||||| | || | |||| ||| |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 67 ttatattagtt 77
|||||||||||
Sbjct: 28 ttatattagtt 18
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 103 bits (52), Expect = 4e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
|||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||| |
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 65 tcttatattagt 76
||||||||||||
Sbjct: 75 tcttatattagt 64
Score = 77.8 bits (39), Expect = 2e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 20 actaatataagagcgtttagatcactaaaatagtaatctaaacactcttatattagttca 79
||||||||||||||||||||||||||| || | ||||||| |||||||||||||| |
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 cggagggagta 90
|||||||||||
Sbjct: 124 cggagggagta 134
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttag 39
||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttag 38
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 34 gtttagatcactaaaatagtaatctaaacactcttatattagttcacggagggagtac 91
|||||||||| |||||| | | |||||| |||||||||||||| || ||||||||||
Sbjct: 61 gtttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagtac 4
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||| |||||||| ||||||||||||| |||||||||||| |||| |||||||||||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 66 cttatattagttcacggagggagta 90
|||||||| || ||||||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
||||||||||||||||||||||||| ||| |||||||||||| || ||||||||| |
Sbjct: 4 atactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgc 63
Query: 65 tcttatattagttcacggagggagtacc 92
||||||||||||| | ||||||||||||
Sbjct: 64 tcttatattagtttatggagggagtacc 91
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||||||||||||||| ||||||| | ||||||||| ||||||| ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 66 cttatattagttcacggagggagta 90
||||||||||| || |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||| ||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 66 cttatatt 73
||||||||
Sbjct: 65 cttatatt 72
Score = 61.9 bits (31), Expect = 1e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 9 tccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactctt 68
|||||| ||||| |||||||||||||||||||||||| ||| |||||||| | |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 69 atattagttcacggagggagtac 91
||||| ||| || ||||||||||
Sbjct: 26 atatttgtttacagagggagtac 4
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactctt 68
||||||||||||||||||||||| | |||||||||||||| |||| ||||||| ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 69 atattagttcacggagggagtac 91
||||||||| || ||||||||||
Sbjct: 68 atattagtttacagagggagtac 90
Score = 75.8 bits (38), Expect = 9e-14
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||||| | |||||||||||| |||| ||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 66 cttatattagttcacggaggga 87
|||||||||||| || ||||||
Sbjct: 29 cttatattagtttacagaggga 8
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 66 cttatattagttcacggagggagtac 91
||||||||||| || | ||||||||
Sbjct: 65 tttatattagtttacagggggagtac 90
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||| |||||||||||||||| ||| |||||| ||||| ||||||||||||| ||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 66 cttatattagttcacggaggga 87
|||||||||||| ||| |||||
Sbjct: 65 cttatattagtttacgaaggga 86
Score = 87.7 bits (44), Expect = 2e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttatattag 75
|||||||||||||||||| |||||| ||||| |||||||||||| |||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 76 ttcacggagggagtac 91
|| || ||||||||||
Sbjct: 19 tttacagagggagtac 4
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 87.7 bits (44), Expect = 2e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaa 61
|||||||||||||||||||||||||||| |||||||||||||| |||| |||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttaga 40
||||||||| ||||||||||||||||||||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttaga 62
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 87.7 bits (44), Expect = 2e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttat 70
||||||||||||||||||| ||| ||||||||||| || |||| ||||||| |||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcact-aagtagtgatctaaatgctcttat 67
Query: 71 attagttcacggagggagta 90
||||||| ||||||||||||
Sbjct: 68 attagtttacggagggagta 87
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcacta 46
||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcacta 47
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||| ||||||||||||||| ||| ||||||||| || ||||| ||||||| ||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 66 cttatattagttcacggaggga 87
|||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 69.9 bits (35), Expect = 6e-12
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactctt 68
|||||| ||||||||||||||||||||||||| |||||| || | ||||||| || ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 69 atattagttcacggagggagtac 91
||||||||| || |||||||||
Sbjct: 68 atattagtttacaaagggagtac 90
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
||||||||||||||||||||||||||||| || ||||||||| |||| ||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgc 63
Query: 65 tcttatattagttcacggagggagta 90
||||||||| || ||||||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||| ||||||||||| |||||||||||||| |||| |||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| || |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 79.8 bits (40), Expect = 6e-15
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 10 ccctctgtaaactaatataagagcgtttagatcactaaaatagt 53
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaatagt 52
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgttt 37
||||||||||||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 79.8 bits (40), Expect = 6e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||| |||||||||| ||||||||||||||||||||||| || |||| |||||||| ||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 66 cttatatt 73
||||||||
Sbjct: 65 cttatatt 72
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 4 tatactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaaca 63
||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||
Sbjct: 91 tatacaccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacg 32
Query: 64 ctcttatatt 73
||||||||||
Sbjct: 31 ctcttatatt 22
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 75.8 bits (38), Expect = 9e-14
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagta---atctaaac 62
|||||||| |||||| ||||||||||||||||||||||||| | ||||| ||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 63 actcttatattagttcacggagggagta 90
|||| ||||| ||||| |||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 62/73 (84%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaa---tagtaatctaaa 61
||||||||||||| || ||||| |||||||||||||||||| | |||| |||||||
Sbjct: 4 atactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaa 63
Query: 62 cactcttatatta 74
| |||||||||||
Sbjct: 64 cgctcttatatta 76
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcgtttagatcactaa--aatagtaatctaaacactc 66
||||||||||||||||||||||| | ||||||||||||| | |||| ||||||| ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 67 ttatattagttcacggagggagtac 91
||||||||||| || ||||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcacta 46
|||||||||||||||||||||||||| | ||||||||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcacta 51
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 75.8 bits (38), Expect = 9e-14
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagta 54
|||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcactaaaatagta 53
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 12 ctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttata 71
|||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70
Query: 72 tt 73
||
Sbjct: 71 tt 72
Score = 63.9 bits (32), Expect = 3e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 2 catatactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaa 61
||||||||| ||| | ||| |||||||||| || |||||||||||| |||| |||||||
Sbjct: 93 catatactcactccgcaaagaaatataagagtgtctagatcactaaagtagtgatctaaa 34
Query: 62 cactcttatatt 73
| ||||||||||
Sbjct: 33 cgctcttatatt 22
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacac 64
|||||||||| ||||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 90 atactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgt 31
Query: 65 tcttatattagttcacggagggagta 90
||||||||||||| ||||||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| |||||||||||||||| | ||||||| ||| || |||| |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 66 cttatattagttcacggagggagta 90
|||||||||||| | ||||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||||||||||||||||| ||| |||| || ||||||||| | | |||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 66 cttatattagttcacggagggagta 90
||||||||||| ||||||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcacta 46
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcacta 48
Score = 69.9 bits (35), Expect = 6e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 17 taaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttatattagt 76
||||||||||||| ||||||||||||| | || |||| ||||||| |||||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatca-ttaagtagtgatctaaatgctcttatattagt 74
Query: 77 tcacggagggagtac 91
| || ||||||||||
Sbjct: 75 ttacagagggagtac 89
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||||| |||||||||||||||||| ||||||| |||| ||||||| ||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 66 cttatatt 73
||||||||
Sbjct: 65 cttatatt 72
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
|||||||||| |||| ||||||||||| ||||||| |||| |||| ||||||| ||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 66 cttatattagttcacggagggagtac 91
|||||||| || || ||||||||||
Sbjct: 29 cttatatttctttaccgagggagtac 4
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 71.9 bits (36), Expect = 1e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 34 gtttagatcactaaaatagtaatctaaacactcttatattagttcacggagggagtacca 93
||||||||||||||| |||| ||||||||||||||||||| || || ||||||||||||
Sbjct: 31 gtttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagtacca 90
Score = 63.9 bits (32), Expect = 3e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaacact 28
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 69.9 bits (35), Expect = 6e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcgtttagatcactaaaatagtaatctaaacactcttatattag 75
|||||| |||||||||||||| |||||||| || |||| | |||||| ||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 76 ttcacggagggagta 90
|| ||||||||||||
Sbjct: 19 tttacggagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgtttagatcacta 46
|||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtaaagaaatataagagcgtttaggtcacta 45
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 67.9 bits (34), Expect = 2e-11
Identities = 75/89 (84%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 3 atatactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaac 62
|||||||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 2 atatactccctctgtaaagaaatataagagcgtttagatc------atagtgatctaaac 55
Query: 63 actcttatattagttcacggagggagtac 91
|||||||||| || || ||||||||||
Sbjct: 56 gctcttatatttctttacagagggagtac 84
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcacta 46
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta 43
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||||||||| ||||||||| | ||||||| |||| |||| ||||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 66 cttatattagttcacggagggagtac 91
|||||||| | |||||||||||||
Sbjct: 29 cttatatttctgtacggagggagtac 4
Score = 50.1 bits (25), Expect = 5e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgtttagatcactaaaatagtaatctaaacact 65
||||||||| ||| | ||||||||| ||||||||||||||| |||| ||||||| |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 66 cttatattagttcacggagggagta 90
|||||||| || || |||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagc 33
|||||||||||||||||||||||||||||
Sbjct: 4 atactccctctgtaaactaatataagagc 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcgt 35
||||||||| ||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataagagcgt 33
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 ctcttatattagttcacggagggagta 90
|||||||||||||| ||||||||||||
Sbjct: 36 ctcttatattagtttacggagggagta 62
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 56.0 bits (28), Expect = 8e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 3 atatactccctctgtaaactaatataagagcgtttagatcactaaaatagta 54
||||||||| || ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 95 atatactccatccgtaaagaaatacaagagcgtctagatcactaaaatagta 44
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcgttt 37
||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcg 34
||||||||| |||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagcg 46
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 59 aaacactcttatattagttcacggagggagta 90
||||||||||||||||||| || |||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 50.1 bits (25), Expect = 5e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 2 catatactccctctgtaaactaatataagagcgtttagatcacta 46
||||| ||||||||||||| ||||||||| | ||||||||||||
Sbjct: 82 catattctccctctgtaaagaaatataagatcatttagatcacta 38
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcgttta 38
|||||||||||||||| ||||||||| ||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgttta 37
