miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 123 bits (62), Expect = 5e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| |||||||||||||| ||||||||| |||| ||
Sbjct: 4 gtactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaac 63
Query: 75 tcttatattagtttacagagggagta 100
| ||||||||||||||||||||||||
Sbjct: 64 ttttatattagtttacagagggagta 89
Score = 93.7 bits (47), Expect = 5e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||| | | |||| || |||| |||| |||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 76 cttatattagtttacagagggagtact 102
|||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 117 bits (59), Expect = 3e-26
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 13 tggtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaac 72
|||||||||||||||||| |||||||||| ||||| |||||||| |||||| ||||||||
Sbjct: 2 tggtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaac 61
Query: 73 actcttatattagtttacagagggagt 99
||||||||||||||||| ||||||||
Sbjct: 62 gctcttatattagtttactgagggagt 88
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactc 76
|||||||| |||||||||||||||| ||||||||||||| |||| ||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattagtttacagagggagtac 101
|||||||| ||||| ||||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 cttatattagtttacagagggagtac 101
|||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
Score = 107 bits (54), Expect = 3e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||| || |||||||||||| |||||||||||||||
Sbjct: 90 gtactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacac 31
Query: 75 tcttatattagtttacagagggagta 100
|||||||||||||||| |||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 cttatattagtttacagagggagtac 101
|||||||||||||| ||||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 14 ggtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaaca 73
|||||||||||||||||||||||||| | ||||||| |||| |||| ||||||||
Sbjct: 3 ggtactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacg 62
Query: 74 ctcttatattagtttacagagggagta 100
||||||||||||||||||||||||||
Sbjct: 63 ttcttatattagtttacagagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 cttatattagtttacagagggagtac 101
|||||||| ||||| |||||||||||
Sbjct: 29 cttatattggtttatagagggagtac 4
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| ||||| ||||||||| |||||||||||||| |||| ||||||| |
Sbjct: 4 gtactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgc 63
Query: 75 tcttatattagtttacagagggagta 100
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttacggagggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 115 bits (58), Expect = 1e-25
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
||||||||||||||||||||||||| | ||||||| |||| |||||| ||||||||||
Sbjct: 88 gtactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacac 31
Query: 75 tcttatattagtttacagagggagtacta 103
|||||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagtacta 2
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/90 (87%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| ||||||||| |||| |||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgc 61
Query: 75 tcttatattagtttacagagggagtactag 104
| |||||||||||||| |||||||||||||
Sbjct: 62 tattatattagtttacggagggagtactag 91
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 115 bits (58), Expect = 1e-25
Identities = 82/89 (92%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||
Sbjct: 88 gtactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacac 31
Query: 75 tcttatattagtttacagagggagtacta 103
| |||||||||||||||||||||||||||
Sbjct: 30 ttttatattagtttacagagggagtacta 2
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/90 (87%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||| | ||||||||| |||| |||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgc 61
Query: 75 tcttatattagtttacagagggagtactag 104
|||||||||||||||| |||||||||||||
Sbjct: 62 tcttatattagtttacggagggagtactag 91
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||| |
Sbjct: 4 gtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgc 63
Query: 75 tcttatattagtttacagagggagta 100
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttacggagggagta 89
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| ||||||| |||| |||| |||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 cttatattagtttacagagggagtactag 104
|||||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtactag 1
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 113 bits (57), Expect = 5e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| | |||||||||||||||||| |||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 76 cttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| | ||||||||||| |||| |||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 cttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 113 bits (57), Expect = 5e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| |||||||| |||| |||||| ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 cttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 cttatattagtttacagagggagta 100
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 29 aactaatataagaatgtttagatcactactttagtaatctaaacactcttatattagttt 88
||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 89 acagagggagta 100
||||||||||||
Sbjct: 16 acagagggagta 5
Score = 87.7 bits (44), Expect = 3e-17
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| ||||||||||||| |||| |||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 76 cttatattagtttacagagggagtacta 103
|||||||||||| ||| |||||||||||
Sbjct: 65 cttatattagttcaca-agggagtacta 91
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 109 bits (55), Expect = 8e-24
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactctt 78
||||| ||||||||||||||||| |||||| ||||| |||||||||||||| ||||||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 79 atattagtttacagagggagtac 101
|||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagtac 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| | ||||||| |||| |||| |||||| |
Sbjct: 4 gtactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgc 63
Query: 75 tcttatattagtttac 90
||||||||||||||||
Sbjct: 64 tcttatattagtttac 79
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||| | |||||||||||||| | |||||| ||||||||||||||||||||| |
Sbjct: 90 gtactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgc 31
Query: 75 tcttatattagtttacagagggagta 100
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| |||||||| |||| |||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 cttatattagtttacagagggagtact 102
|||||||||||||||| |||||||||
Sbjct: 65 tttatattagtttacagggggagtact 91
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| |||||||||||||| |||| | || |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 cttatattagtttacagagggagta 100
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| |||| |||| || |||| |||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 76 cttatattagtttacagagggagta 100
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 76 cttatattagtttacagagggagta 100
|||||| ||||||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||| || |||||||| ||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 76 cttatattagtttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 103 bits (52), Expect = 5e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 90 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 31
Query: 75 tcttatattagtttacagagggagtact 102
||||||||||||||||||||||| ||||
Sbjct: 30 tcttatattagtttacagagggaatact 3
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactctt 78
|||||| |||||||||||||||| |||||||||||| |||| ||||||| ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattagtttacagagggagtac 101
|||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagtac 90
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 103 bits (52), Expect = 5e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 21 cctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactcttat 80
||||||||||||||||||||| ||||||||||||| |||||| ||| |||| |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attagtttacagagggagta 100
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| ||||| |||||||||| |||| |||||||| |||| |||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 cttatattagtttacagagg 95
||||||||||||||| ||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||| |||| |||||||||||||||| |||||||||||| |||||| | |||||| ||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 76 cttatattagtttacagagggagtacta 103
||||||||||||||| ||||||||||||
Sbjct: 29 cttatattagtttacggagggagtacta 2
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
||||||||||||||||||||||||||| |||||| |||||| |||| ||||||| |
Sbjct: 4 gtactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgc 63
Query: 75 tcttatattagtttacagagggagta 100
||||||||||||||||||||| ||||
Sbjct: 64 tcttatattagtttacagaggaagta 89
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 91.7 bits (46), Expect = 2e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 45 tttagatcactactttagtaatctaaacactcttatattagtttacagagggagtact 102
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagtact 3
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcacta 56
|||||||||| |||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcttttagatcacta 45
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 66 tctaaacactcttatattagtttacagagggagtac 101
||||||| |||||||||||||||| ||||||||||
Sbjct: 62 tctaaacgctcttatattagtttaaggagggagtac 97
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 76 cttatattagtttacagagggagtac 101
|||||||| |||||||| |||||||
Sbjct: 29 cttatatttctttacagaaggagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
||||||| || ||||| ||||||||| || |||||||||| |||| ||||||||||
Sbjct: 4 gtactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacac 63
Query: 75 tcttatattagtttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactc 76
||||||||||||||||||||||||| ||||||||||| | |||| | |||| ||| |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattagtttacagaggga 97
||||||||||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 26 gtaaactaatataagaatgtttagatcactactttagtaatctaaacactcttatattag 85
|||||||||||||||| ||| |||||| || | || |||||||| ||||||||||||
Sbjct: 15 gtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatattag 74
Query: 86 tttacagagggagt 99
||||| ||||||||
Sbjct: 75 tttacggagggagt 88
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||| ||||||||||||||| |||||| |||||||| ||||||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 76 cttatattagtttacagagggagta 100
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||||||||||||||||||||| ||||||| ||| |||| |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 cttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 76 cttatattagtttacagagg 95
|||||||||||||||||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 cctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactcttat 80
|||| |||||||||||||| | |||||||||||| | ||| ||||||| |||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 81 attagtttacagagggagta 100
|||||||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
||||||||| |||||||||||||| | ||||||||| |||||||||| ||||||| |
Sbjct: 90 gtactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgc 31
Query: 75 tcttatattagtttacagaggga 97
|||||||||||||||| ||||||
Sbjct: 30 tcttatattagtttacggaggga 8
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactctt 78
||||||||||||||||||||||| ||||||| |||| || | ||||||| || ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattagtttacagagggagtact 102
||||||||||||| ||||||||||
Sbjct: 68 atattagtttacaaagggagtact 91
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/90 (87%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactact--ttagtaatctaaac 72
|||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 92 gtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaa 33
Query: 73 actcttatattagtttacagagggagtact 102
||||||||||||||||||||||| ||||
Sbjct: 32 ggtcttatattagtttacagagggaatact 3
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagaatgtttagatcactactt--tagtaatctaaacactc 76
|||||| |||||||||||||||| |||||||||||| | |||| ||||||| ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattagtttacagagggagtac 101
|||||||||||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 85.7 bits (43), Expect = 1e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 13 tggtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaac 72
|||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 90 tggtactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaac 31
Query: 73 act 75
|||
Sbjct: 30 act 28
Score = 79.8 bits (40), Expect = 7e-15
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||||||||| ||| |||| |||||||||||||| |||| ||||||||||
Sbjct: 4 gtactccctccgtaaataaatgtaag--tgtttagatcactaaagtagtgatctaaacac 61
Query: 75 tcttatattagtttacagagggagtac 101
||||||||| ||||||||||||||||
Sbjct: 62 tcttatatttctttacagagggagtac 88
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||| | | |||| | || || ||||||||| |||| ||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 76 cttatattagtttacagagggagtac 101
|||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtac 4
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||| | |||||||||||| |||| ||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 76 cttatattagtttacagagggagtac 101
|||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagtac 90
Score = 69.9 bits (35), Expect = 7e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 14 ggtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaaca 73
|||||||||||| ||||||||||||||| ||||||| | || |||| |||||||
Sbjct: 91 ggtactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatg 32
Query: 74 ctcttatattagtttacagagggagta 100
|| ||||||||||||||||||||||||
Sbjct: 31 cttttatattagtttacagagggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactctt 78
|||||| ||||| ||||||||| ||||||||||||| ||||| |||||||| | |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 79 atattagtttacagagggagtactag 104
||||| ||||||||||||||||||||
Sbjct: 26 atatttgtttacagagggagtactag 1
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| |||||||||||||||| || |||||||||||||||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 76 cttatattagtttacagagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||||||||| ||||||||| |||||||||||| |||| |||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 76 cttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 77.8 bits (39), Expect = 3e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 30 actaatataagaatgtttagatcactactttagtaatctaaacactcttatattagttta 89
|||||||||||| ||||||||||||| |||| | ||||||| ||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 90 cagagggagta 100
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 69.9 bits (35), Expect = 7e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||||||||||||||||||||| ||||||||| || |||| |||||||| ||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 76 cttatattagt 86
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 67 ctaaacactcttatattagtttacagagggagtact 102
|||||| |||||||||||||||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagtact 3
Score = 48.1 bits (24), Expect = 2e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| |||||| ||| | |||| | ||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaacac 63
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 26 gtaaactaatataagaatgtttagatcactactttagtaatctaaacactcttatatt 83
|||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatt 72
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||||||| | |||||||||||||||||||||||| |||| |||||||
Sbjct: 4 gtactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatga 63
Query: 75 tcttatattagtttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 64 tcttatatttctttacagagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| ||||| ||||||||| ||||||| ||||||||||| ||||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 76 cttatattagtttacagagggagtac 101
|||||||| | ||| ||||||||||
Sbjct: 29 cttatatttctgtacggagggagtac 4
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 20 ccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacactctta 79
||||| ||||| ||||||||| |||||||||||||||| ||| |||||||| ||||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 80 tattagtttacagagggagta 100
|||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||| |||| ||||| ||||||||| |||||||||||| |||| |||||||| ||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 76 cttatattagtttacagaggg 96
|||||||| |||||||||||
Sbjct: 65 cttatatttctttacagaggg 85
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 71.9 bits (36), Expect = 2e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
|||||||| | ||||||||||||| | |||||||||| || | ||| ||||||| ||
Sbjct: 5 tactcccttcataaactaatataaaagcgtttagatcattaagt-agtgatctaaatgct 63
Query: 76 cttatattagtttacagagggagtacta 103
||||||||||||||||||||||||||||
Sbjct: 64 cttatattagtttacagagggagtacta 91
Score = 69.9 bits (35), Expect = 7e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||||||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct: 89 gtactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgc 31
Query: 75 tcttatattagttta 89
| |||||||||||||
Sbjct: 30 ttttatattagttta 16
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 69.9 bits (35), Expect = 7e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||||||||| ||||||||| |||||| ||||||||| ||| |||| ||| ||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 76 cttatattagtttac 90
|||||||| ||||||
Sbjct: 65 cttatatttgtttac 79
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| |||| ||||||||| ||||||| ||||||||||| ||||||| |
Sbjct: 90 gtactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgc 31
Query: 75 tcttatattagtttacagagggagtact 102
||||||||| ||||| |||||||||||
Sbjct: 30 tcttatatttctttaccgagggagtact 3
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| ||||| ||||||||| ||||||| ||||| |||| ||||||| |
Sbjct: 4 gtactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgc 63
Query: 75 tcttatattagtttacagagggagtac 101
||||||||| |||| |||||||||||
Sbjct: 64 tcttatatttctttatagagggagtac 90
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 69 aaacactcttatattagtttacagagggagta 100
||||||||||||||||||||||||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgttt 47
||||||||| |||||||||||||||| |||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 ctcttatattagtttacagagggagtac 101
||||||||||||||||| ||||||||||
Sbjct: 48 ctcttatattagtttaccgagggagtac 75
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 ggtactccctccgtaaactaatataaga 41
||||||||||| ||||||||||||||||
Sbjct: 76 ggtactccctcggtaaactaatataaga 49
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 51 tcactactttagtaatctaaacactcttatattagtttacagaggg 96
|||||| |||||| ||||||| |||||||||||||||||||||||
Sbjct: 54 tcactattttagtgatctaaatgctcttatattagtttacagaggg 9
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 69 aaacactcttatattagtttacagagggagtact 102
|||| |||||||||||||||||||||||||||||
Sbjct: 65 aaacgctcttatattagtttacagagggagtact 98
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 53 actactttagtaatctaaacactcttatattagtttacagagggagta 100
|||||| |||| |||||||| ||||||||||| |||||| ||||||||
Sbjct: 45 actactctagtgatctaaacgctcttatattattttacatagggagta 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 72/88 (81%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagta---atctaaac 72
|||||||| ||||| |||||||||| ||||||||||||| ||||| ||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 73 actcttatattagtttacagagggagta 100
|||| ||||| || ||||||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 72/87 (82%), Gaps = 6/87 (6%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacact 75
||||||||| ||||| ||||||||| |||||||||| |||| |||||||| ||
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58
Query: 76 cttatattagtttacagagggagtact 102
|||||||| |||||||||||||||||
Sbjct: 59 cttatatttctttacagagggagtact 85
Score = 54.0 bits (27), Expect = 4e-07
Identities = 71/86 (82%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 15 gtactccctccgtaaactaatataagaatgtttagatcactactttagtaatctaaacac 74
|||||||||| ||||| ||||||||| ||||||||||||| | |||||||| |
Sbjct: 84 gtactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgc 31
Query: 75 tcttatattagtttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 30 tcttatatttctttacagagggagta 5
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 74 ctcttatattagtttacagagggagta 100
|||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataaga 37
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 ctcttatattagtttacagagggagta 100
||||||||||||||||| |||||||||
Sbjct: 36 ctcttatattagtttacggagggagta 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataaga 41
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 23 tccgtaaactaatataagaatgtttagatcactact 58
|||||||| |||||||||| |||||||||||||||
Sbjct: 12 tccgtaaagaaatataagaacgtttagatcactact 47
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 48.1 bits (24), Expect = 2e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 53 actactttagtaatctaaacactcttatattagtttacagagggagta 100
|||| |||||| |||||||| ||||||||| |||||||||||||||
Sbjct: 52 actattttagtgatctaaacgatcttatatttctttacagagggagta 5
