miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 159 bits (80), Expect = 1e-38
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 23 tagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaat 82
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 tagtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaac 61
Query: 83 gctcttatattagtttacggagggagta 110
||||||||||||||||||||||||||||
Sbjct: 62 gctcttatattagtttacggagggagta 89
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||||||||||||||||||||||| |||| |||| |||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 86 cttatattagtttacggagggagtac 111
||||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 141 bits (71), Expect = 3e-33
Identities = 83/87 (95%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 86 cttatattagtttacggagggagtacc 112
||||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacggagggagtacc 3
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||| |||||||||||||| |||||||||| |||| |||| |||||| |
Sbjct: 4 gtactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgt 63
Query: 85 tcttatattagtttacggagggagta 110
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 127 bits (64), Expect = 4e-29
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
|||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| |
Sbjct: 91 agtactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacg 32
Query: 84 ctcttatattagtttacggaggga 107
||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacggaggga 8
Score = 69.9 bits (35), Expect = 8e-12
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctctt 88
|||||| ||||||||||||||||||||||||| |||| || | |||||||||| ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 89 atattagtttacggagggagtac 111
|||||||||||| |||||||||
Sbjct: 68 atattagtttacaaagggagtac 90
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 125 bits (63), Expect = 2e-28
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 86 cttatattagtttacggagggagtacc 112
|||||||||||||| ||||||||||||
Sbjct: 65 cttatattagtttatggagggagtacc 91
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||| ||||||||||||||||| ||||||| | || |||| |||||||||
Sbjct: 90 gtactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgc 31
Query: 85 tcttatattagtttacggagggagta 110
| |||||||||||||| |||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 86 cttatattagtttacggagggagta 110
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 86 cttatattagtttacggagggagta 110
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 86 cttatattagtttacggagggagta 110
|||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||| ||||||||||| |||||||||||| |||| ||| ||||||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 86 cttatattagtttacggagggagta 110
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 86 cttatattagtttacggagggagta 110
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 86 cttatattagtttacggagggagta 110
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 121 bits (61), Expect = 3e-27
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 22 atagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaa 81
|||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 92 atagtactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaa 34
Query: 82 tgctcttatattagtttacggagggagta 110
|||||||||||||||||| |||||||||
Sbjct: 33 cgctcttatattagtttacagagggagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 86 cttatattagtt 97
||||||||||||
Sbjct: 65 cttatattagtt 76
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 117 bits (59), Expect = 4e-26
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
||||||||| |||||||||||||||| ||| |||||| ||||||||||||| |||||| |
Sbjct: 91 agtactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacg 32
Query: 84 ctcttatattagtttacggagggagta 110
||||||||||||||||| |||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 86 cttatattagtttacggagggagtac 111
|||||||||||||| | ||||||||
Sbjct: 65 tttatattagtttacagggggagtac 90
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 115 bits (58), Expect = 2e-25
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||| ||||||||||||||||||||||| |||||||||||| |||||| ||||| |||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 86 cttatattagtttacggagggagtac 111
||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagtac 4
Score = 105 bits (53), Expect = 1e-22
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 22 atagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaa 81
||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||
Sbjct: 1 atagtactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaa 60
Query: 82 tgctcttatattagtttacggagggagta 110
||||||||||||||||||| |||| ||||
Sbjct: 61 tgctcttatattagtttacagaggaagta 89
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 113 bits (57), Expect = 6e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||||||||||||||| |||||| |||||||| |||| |||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 86 cttatattagtttacggagggagta 110
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 89.7 bits (45), Expect = 9e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||||| | ||||||| ||| |||| |||||||||||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 86 cttatattagtttacggagggagta 110
|||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 109 bits (55), Expect = 1e-23
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |
Sbjct: 90 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 31
Query: 85 tcttatattagtttacggaggga 107
|||||||||||||||| ||||||
Sbjct: 30 tcttatattagtttacagaggga 8
Score = 87.7 bits (44), Expect = 4e-17
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
|||| ||||||||||||||||||||||| | |||||||||||| |||| |||||| |
Sbjct: 3 agtattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaag 62
Query: 84 ctcttatattagtttacggagggagtac 111
|||||||||||||||| ||||||||||
Sbjct: 63 gtcttatattagtttacagagggagtac 90
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 109 bits (55), Expect = 1e-23
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||
Sbjct: 3 agtactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaa 62
Query: 84 ctcttatattagtttacggagggagta 110
|| |||||||||||||| |||||||||
Sbjct: 63 cttttatattagtttacagagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||| || |||| || |||| |||| |||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 86 cttatattagtttacggagggagtac 111
||||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagtac 4
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 40 actaatataagagcgtttagatcactactttagtattctaaatgctcttatattagttta 99
||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 100 cggagggagta 110
|||||||||||
Sbjct: 124 cggagggagta 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttag 59
||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtaaactaatataagagcgtttag 38
Score = 69.9 bits (35), Expect = 8e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||||||| ||||||||| || |||| |||||| |||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 86 cttatattagt 96
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 77 ctaaatgctcttatattagtttacggagggagtac 111
||||| |||||||||||||||||| ||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagtac 4
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 86 cttatattagtttacggagggagtac 111
|||||||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
Score = 99.6 bits (50), Expect = 9e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||||||||||||||||||||| | | |||||||||||| ||||| |||||| |
Sbjct: 90 gtactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacac 31
Query: 85 tcttatattagtttacggagggagta 110
||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 107 bits (54), Expect = 4e-23
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||||||| ||||| |||||||||| ||||||||||||| |||| ||||||| ||
Sbjct: 4 gtactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgc 63
Query: 85 tcttatattagtttacggagggagta 110
||||||||||||||||||||||||||
Sbjct: 64 tcttatattagtttacggagggagta 89
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 86 cttatattagtttacggagggagtac 111
|||||||| ||||| ||||||||||
Sbjct: 29 cttatattggtttatagagggagtac 4
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||||||||||||||| ||||||||||||| |||| | | ||||||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 86 cttatattagtttacggagggagta 110
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||||||| |||| |||| || |||| |||||| ||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 86 cttatattagtttacggagggagta 110
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||| ||||||||||| |||||||||||||||||||||| ||||| |||||| |||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 86 cttatattagtttacggagggagta 110
||||||||| |||||||||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 86 cttatattagtttacggagggagta 110
|||||| |||||||| || ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 103 bits (52), Expect = 6e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 36 gtaaactaatataagagcgtttagatcactactttagtattctaaatgctcttatattag 95
|||||||||||||||||| |||||| ||||| ||||||| ||||||| ||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 96 tttacggagggagtac 111
||||| ||||||||||
Sbjct: 19 tttacagagggagtac 4
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgc 63
Query: 85 tcttatattagtttacggaggga 107
||||||||||||||||| |||||
Sbjct: 64 tcttatattagtttacgaaggga 86
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 101 bits (51), Expect = 2e-21
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 22 atagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaa 81
||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||
Sbjct: 1 atagtactccctctgtaaactaatataagagtgtttagataactaaaatag--ttctaaa 58
Query: 82 tgctcttatattagtttacggagggagtac 111
||| |||||||||||||||||||||||||
Sbjct: 59 cgctattatattagtttacggagggagtac 88
Score = 91.7 bits (46), Expect = 2e-18
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 23 tagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaat 82
|||||||||||| |||||||||||||| |||||||||| |||| |||||| ||||||
Sbjct: 90 tagtactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaac 33
Query: 83 gctcttatattagtttacggagggagtac 111
||||||||||||||||| ||||||||||
Sbjct: 32 actcttatattagtttacagagggagtac 4
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 101 bits (51), Expect = 2e-21
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 22 atagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaa 81
|||||||||||||||||||||||||||| || |||||||| |||| ||| |||||||
Sbjct: 1 atagtactccctctgtaaactaatataaaagtgtttagataactaaaatag--ttctaaa 58
Query: 82 tgctcttatattagtttacggagggagtac 111
|||||||||||||||||||||||||||||
Sbjct: 59 cgctcttatattagtttacggagggagtac 88
Score = 91.7 bits (46), Expect = 2e-18
Identities = 79/89 (88%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 23 tagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaat 82
|||||||||||| ||||||||||||||||||||||||| |||| |||||| ||||||
Sbjct: 90 tagtactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaac 33
Query: 83 gctcttatattagtttacggagggagtac 111
|| |||||||||||||| ||||||||||
Sbjct: 32 acttttatattagtttacagagggagtac 4
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||| ||||| ||||||||||| |||| |||||||| |||||| |||||| ||
Sbjct: 4 gtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgc 63
Query: 85 tcttatattagtttacggagggagt 109
|||||||||||||||| ||||||||
Sbjct: 64 tcttatattagtttactgagggagt 88
Score = 93.7 bits (47), Expect = 6e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 27 actccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctc 86
|||||||| ||||||||||||||||||||||||||||||| |||| || ||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 87 ttatattagtttacggagggagtacca 113
|||||||| ||||||||||||||||||
Sbjct: 28 ttatattaatttacggagggagtacca 2
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 97.6 bits (49), Expect = 4e-20
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 22 atagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaa 81
||||||| |||| ||||||||||||||||||||||||||||||| |||||| || |||
Sbjct: 93 atagtacaacctccgtaaactaatataagagcgtttagatcactattttagtgatccaaa 34
Query: 82 tgctcttatattagtttacggagggagta 110
|||||||||||| ||||| |||||||||
Sbjct: 33 cgctcttatattaatttacagagggagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||| |||||||||||||||| |||||||| |||| |||||| |||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 86 cttatattagtttacggagg 105
||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 95.6 bits (48), Expect = 1e-19
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 23 tagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaat 82
||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||
Sbjct: 91 tagtactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaac 33
Query: 83 gctcttatattagtttacggagggagta 110
||| ||||||||||||| | ||||||||
Sbjct: 32 gcttttatattagtttatgaagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 37 taaactaatataagagcgtttagatcactactttagtattctaaatgctcttatattagt 96
||||||||||||| ||||||||||||| || | ||| |||||||||||||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaagt-agtgatctaaatgctcttatattagt 74
Query: 97 ttacggagggagtac 111
|||| ||||||||||
Sbjct: 75 ttacagagggagtac 89
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 86 cttatattagtttacggagg 105
|||||||||||||| ||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 31 cctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctcttat 90
||||||||||||||||||| ||| |||||||||||| | ||| |||||||||||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 91 attagtttacggagggagta 110
||||||||||||||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactact--ttagtattctaaat 82
||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||
Sbjct: 92 gtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaa 33
Query: 83 gctcttatattagtttacggaggga 107
| |||||||||||||||| ||||||
Sbjct: 32 ggtcttatattagtttacagaggga 8
Score = 77.8 bits (39), Expect = 3e-14
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactt--tagtattctaaa 81
|||| ||||||||||||||||||||||| | |||||||||||| | |||| ||||||
Sbjct: 3 agtattccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaa 62
Query: 82 tgctcttatattagtttacggagggagtac 111
| |||||||||||||||| ||||||||||
Sbjct: 63 aggtcttatattagtttacagagggagtac 92
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 87.7 bits (44), Expect = 4e-17
Identities = 81/94 (86%), Gaps = 7/94 (7%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttaga-------tcactactttagtattc 77
|||||||||| |||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 97 gtactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatc 38
Query: 78 taaatgctcttatattagtttacggagggagtac 111
|||| |||||||||||||||||| ||||||||||
Sbjct: 37 taaaagctcttatattagtttacagagggagtac 4
Score = 83.8 bits (42), Expect = 5e-16
Identities = 82/96 (85%), Gaps = 7/96 (7%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagt-------att 76
|||||||||||||||||||||||||||||| |||||||||||| |||| | |
Sbjct: 3 agtactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaagt 62
Query: 77 ctaaatgctcttatattagtttacggagggagtacc 112
||||| ||||||||||||||||| ||||||||||||
Sbjct: 63 ctaaacgctcttatattagtttaaggagggagtacc 98
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 85.7 bits (43), Expect = 1e-16
Identities = 79/90 (87%), Gaps = 7/90 (7%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcg-----tttaga--tcactactttagtatt 76
||||||||||||||||||||||||||||||| |||||| |||||| |||||| |
Sbjct: 98 agtactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgat 39
Query: 77 ctaaatgctcttatattagtttacggaggg 106
|||||||||||||||||||||||| |||||
Sbjct: 38 ctaaatgctcttatattagtttacagaggg 9
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 30 ccctctgtaaactaatataagagcgtttagatcacta 66
|||||||||||||||||||||||| ||||||||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcacta 45
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||||||| |||| ||||||||||| ||||||| ||||||||||| |||||| ||
Sbjct: 90 gtactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgc 31
Query: 85 tcttatattagtttacggagggagtac 111
||||||||| ||||| ||||||||||
Sbjct: 30 tcttatatttctttaccgagggagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
||||||||||| ||||| |||||||||||||||||| ||||| |||| ||||||||
Sbjct: 3 agtactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatg 62
Query: 84 ctcttatattagtttacggagggagtac 111
|||||||||| |||| ||||||||||
Sbjct: 63 ctcttatatttctttatagagggagtac 90
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 30 ccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctctta 89
||||||||||| ||||||||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 90 tattagtttacggagggagta 110
|||| ||||| |||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||| |||||||||| ||||||||||||||||||||||| |||| |||||| |||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 86 cttatattagtttacggaggg 106
|||||||| ||||| |||||
Sbjct: 65 cttatatttctttacagaggg 85
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 79.8 bits (40), Expect = 9e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
|||| |||||| ||||| |||||||||||||||||||||||| ||||| |||||| |
Sbjct: 91 agtagtccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacg 32
Query: 84 ctcttatattagtttacggagggagtac 111
| |||||||| |||||| ||||||||||
Sbjct: 31 cccttatatttgtttacagagggagtac 4
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 23 tagtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaat 82
||||||||||||||||||| |||||||| ||||||||||| ||| |||| ||||||
Sbjct: 2 tagtactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaac 61
Query: 83 gctcttatattagtttacggaggga 107
||||||||||| ||||| ||||||
Sbjct: 62 gctcttatatttctttactgaggga 86
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 79.8 bits (40), Expect = 9e-15
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |
Sbjct: 88 gtactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaa--c 31
Query: 85 tcttatattagtttacggagggagtac 111
|||| ||| ||||||||||||||||
Sbjct: 30 acttacatttatttacggagggagtac 4
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 32 ctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctcttata 91
|||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70
Query: 92 ttagtttacggagggagta 110
|| ||| ||||| |||||
Sbjct: 71 tttctttgcggagtgagta 89
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 43 aatataagagcgtttagatcactactttagtattctaaatgctcttatattagtttac 100
|||||||||| || |||||||||| |||| |||||| ||||||||||| ||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttac 15
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 27 actccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctc 86
|||||||| ||||||||||||||||| ||||||||||| | |||| | ||| || ||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 87 ttatattagtttac 100
||||||||||||||
Sbjct: 28 ttatattagtttac 15
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctctt 88
||||| |||||||||||||||||||||| |||||| || | || |||||| |||||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 89 atattagtttacggagggagt 109
|||||||||||||||||||||
Sbjct: 68 atattagtttacggagggagt 88
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 69.9 bits (35), Expect = 8e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||| ||||||||||||||||| ||||||||| ||| ||| || |||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 86 cttatattagtttac 100
|||||||| ||||||
Sbjct: 65 cttatatttgtttac 79
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 36 gtaaactaatataagagcgtttagatcactactttagtattctaaatgctcttatattag 95
|||||| |||||||||||||| |||||||| |||| ||||| |||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 96 tttacggagggagta 110
|||||||||||||||
Sbjct: 19 tttacggagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcacta 66
||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 85 agtactccctctgtaaagaaatataagagcgtttagatcacta 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 72/86 (83%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||| ||||||||||||||||||||| |||| |||||| |||
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58
Query: 86 cttatattagtttacggagggagtac 111
|||||||| ||||| ||||||||||
Sbjct: 59 cttatatttctttacagagggagtac 84
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| |||||||||||||| | |||| | || || ||||||| | ||||||||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 86 cttatattagtttacggagggagtac 111
|||||||||||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||||||||||||||||||||| ||| |||| || |||| || | || |||||
Sbjct: 4 gtactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataa 63
Query: 85 tcttatattagtttacggagggagta 110
| ||||||||||||||||||||||||
Sbjct: 64 ttttatattagtttacggagggagta 89
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||| ||||| |||||||||| |||||||| ||||||||||| |||| | |||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 86 cttatattagtttacggagggagtac 111
|||||||| ||||| || |||||||
Sbjct: 29 cttatatttctttacagaaggagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
||||||| |||||||| ||||||||||||| |||||||||| |||| |||||| |
Sbjct: 4 gtactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacac 63
Query: 85 tcttatattagtttacggagggagta 110
||||||||| |||||||||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 86 cttatattagtttacggagggagtac 111
|||||||| | ||||||||||||||
Sbjct: 29 cttatatttctgtacggagggagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||| ||| | ||||||||| ||||||||||||| |||| ||||||||
Sbjct: 4 gtactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatga 63
Query: 85 tcttatattagtttacggagggagta 110
||||||||| ||||| |||||||||
Sbjct: 64 tcttatatttctttacagagggagta 89
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcacta 66
|||||||| |||||| |||||||||||||||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcacta 52
Score = 60.0 bits (30), Expect = 8e-09
Identities = 74/88 (84%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactt---tagtattctaaat 82
|||||||||||| || ||||| |||||||||||||||||||| |||| ||||||
Sbjct: 5 tactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaac 64
Query: 83 gctcttatattagtttacggagggagta 110
|||||||||||| ||||| ||||||||
Sbjct: 65 gctcttatattattttacatagggagta 92
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcacta 66
||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 5 tactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagc 53
||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagc 32
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 83 gctcttatattagtttacggagggagta 110
||||||||||||||||||||||||||||
Sbjct: 35 gctcttatattagtttacggagggagta 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgt 55
||||||||| ||||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataagagcgt 33
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 82 tgctcttatattagtttacggagggagta 110
||||||||||||||||||| |||||||||
Sbjct: 33 tgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 26 tactccctctgtaaactaatataagagcgttt 57
||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 25 gtactccctctgtaaactaatataagagcg 54
|||||||||| |||||||||||||||||||
Sbjct: 75 gtactccctcggtaaactaatataagagcg 46
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 83 gctcttatattagtttacggagggagtacc 112
|||||||||||||||||| |||||||||||
Sbjct: 47 gctcttatattagtttaccgagggagtacc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 84 ctcttatattagtttacggagggagta 110
||||||||||||||||| |||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 28 ctccctctgtaaactaatataagagcgtttagatcacta 66
||||||||||||| ||||||||| | ||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 aatataagagcgtttagatcactact 68
||||||||| ||||||||||||||||
Sbjct: 22 aatataagaacgtttagatcactact 47
>RF00906;MIR1122;AJ313099.1/1401-1309 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagt 73
||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 3 agtactccctctgtaaacttttataagatgttttaggccactactttagt 52
