miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 123 bits (62), Expect = 6e-28
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||||
Sbjct: 90 ttactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgc 31
Query: 85 tcttatattagtttacggaggtagta 110
| ||||||||||||||||||| ||||
Sbjct: 30 ttttatattagtttacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||| | ||||||| ||||| |||| |||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 123 bits (62), Expect = 6e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 86 cttatattagtttacggaggtagtag 111
|||||||||||||||||||| |||||
Sbjct: 65 cttatattagtttacggagggagtag 90
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| ||||||| ||||| |||| ||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 97.6 bits (49), Expect = 4e-20
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| | |||||| ||||||||||| ||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 86 cttatattagtttacggaggtagtagata 114
||||||||||||||| |||| ||||||||
Sbjct: 65 cttatattagtttacagagggagtagata 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| | |||||| |||| |||| ||||| ||||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| || ||||||||||||||| | ||||||| | |||||||||||||||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 86 cttatattagtttacggagg 105
||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagg 10
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 23 agttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaac 82
|||||||| ||| |||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct: 92 agttactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaat 33
Query: 83 gctcttatattagtttacggaggtagta 110
|||||||||||||||||| |||| ||||
Sbjct: 32 gctcttatattagtttacagagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| |||||||||||||||||||| ||||||| |||| ||||| |||||||||
Sbjct: 4 ttactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgc 63
Query: 85 tcttatattagtttacggaggtagta 110
||||||||||||||||||||| ||||
Sbjct: 64 tcttatattagtttacggagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| ||| |||||||||||||||| ||||||||||||||||||||| |||||| |
Sbjct: 4 ttactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgt 63
Query: 85 tcttatattagtttacggaggtagta 110
| |||||||||||||| |||| ||||
Sbjct: 64 ttttatattagtttacagagggagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||| || ||||||| |||| ||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 86 cttatattagtttacggaggtagta 110
|||||||||||||||||||| ||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||| ||||| ||||||||| ||||||||| |||| |||| |||||||||||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 86 cttatattagtttacggaggtagtag 111
|||||||||||||||||||| |||||
Sbjct: 65 cttatattagtttacggagggagtag 90
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| ||||||| |||| |||||| ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 86 cttatattagttta 99
|||||||| |||||
Sbjct: 29 cttatattggttta 16
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| | |||||||||||| |||| ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 86 cttatattagtttacg 101
||||||||||||||||
Sbjct: 65 cttatattagtttacg 80
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 36 gtaaactaatataagaatgtttagattactactttagtattctaaacgctcttatattag 95
|||||||||||||||| |||||| |||| ||||||| |||||| ||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 96 tttacggaggtagta 110
||||| |||| ||||
Sbjct: 19 tttacagagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 39 aactaatataagaatgtttagattactactttagtattctaaacgctcttatattagttt 98
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 99 acggaggtagta 110
|| |||| ||||
Sbjct: 16 acagagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| |||||||| |||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 86 cttatattagtt 97
||||||||||||
Sbjct: 65 cttatattagtt 76
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 32 ctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttata 91
|||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||
Sbjct: 83 ctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttata 24
Query: 92 ttagtttacggaggtagta 110
|||||||||||||| ||||
Sbjct: 23 ttagtttacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| |||||| | |||| |||| |||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 86 cttatattagtttac 100
|||||| ||||||||
Sbjct: 65 cttatagtagtttac 79
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 33 tctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttatat 92
||||||||||| ||||||| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 82 tctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctcttatat 23
Query: 93 tagtttacggaggtagta 110
|| |||||||||| ||||
Sbjct: 22 taatttacggagggagta 5
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| ||||||||| |||| ||| |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatag--ttctaaacgct 62
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||||||| ||||
Sbjct: 63 attatattagtttacggagggagta 87
Score = 60.0 bits (30), Expect = 8e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||| | ||||||| |||| |||||| ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 34 ctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttatatt 93
|||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||
Sbjct: 81 ctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatatt 22
Query: 94 agtttacggaggtagtag 111
||||||| |||| |||||
Sbjct: 21 agtttacagagggagtag 4
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| ||||||||||||| |||| ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 86 cttatattagtttac 100
||||||||||||||
Sbjct: 65 tttatattagtttac 79
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||| | ||||||||| |||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 86 cttatattagtttacggaggtagta 110
|||||||||||||||||||| ||||
Sbjct: 63 cttatattagtttacggagggagta 87
Score = 60.0 bits (30), Expect = 8e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| ||||||| |||| |||||| ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 86 cttatattagtttacggaggtagta 110
|||||||||||||| |||| ||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| ||||||||| |||| ||||||| | |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 86 cttatattagtttacggaggtagta 110
|||||||||||||| |||| ||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||| | | |||| ||||||| |||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 86 cttatattagtttacggaggtagta 110
||||||||||||||| |||| ||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| ||||| |||||||||| ||||| ||| |||| |||||| ||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 86 cttatattagtttacggagg 105
||||||||||||||| ||||
Sbjct: 65 cttatattagtttactgagg 84
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 27 actctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctc 86
|||| ||| |||||||||||||||| |||||||| |||| |||| || |||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 87 ttatattagtttacggaggtagta 110
|||||||| |||||||||| ||||
Sbjct: 28 ttatattaatttacggagggagta 5
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 79.8 bits (40), Expect = 9e-15
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| ||||||| ||||||||||| |||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 86 cttatattagtttacggagg 105
||||||||||||||| ||||
Sbjct: 29 cttatattagtttacagagg 10
Score = 54.0 bits (27), Expect = 5e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 32 ctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttata 91
|||||||||||||||||||| ||||||| |||| |||| |||||| | |||||||
Sbjct: 11 ctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttata 70
Query: 92 ttagtttacggaggtagta 110
||||||||| |||| ||||
Sbjct: 71 ttagtttacagagggagta 89
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| ||||||||| |||| |||| | | |||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 86 cttatattagtttacggaggtagtag 111
||||||||||||||| |||| |||||
Sbjct: 65 cttatattagtttaccgagggagtag 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 76 tctaaacgctcttatattagtttacggaggtagtag 111
||||||| |||||||||||||||||||||| |||||
Sbjct: 39 tctaaacactcttatattagtttacggagggagtag 4
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| ||| ||||||||||||||||| ||||||||||| |||| ||||||| ||
Sbjct: 4 ttactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgc 63
Query: 85 tcttatattagtttacggaggtagta 110
||||||||||||||| ||||| ||||
Sbjct: 64 tcttatattagtttatggagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 37 taaactaatataagaatgtttagattactactttagtattctaaacgctcttatattagt 96
||||||||||||||| |||||| ||||||| |||| |||||| | ||||||||||||
Sbjct: 78 taaactaatataagagcatttagaacactacttcagtaatctaaatgttcttatattagt 19
Query: 97 ttacggaggtagta 110
||||||||| ||||
Sbjct: 18 ttacggagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| || |||| ||||||||||| |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 86 cttatattagtttacggaggtagta 110
|||||||| |||||||||| ||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||| | ||||||| |||| |||| || |||||| |||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 86 cttatattagtttacggaggtagta 110
|||||||||||||| ||||| ||||
Sbjct: 65 cttatattagtttatggagggagta 89
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 37 taaactaatataagaatgtttagattactactttagtattctaaacgctcttatattagt 96
||||||||||||||| ||||||||| || |||| |||||| ||| ||||||||||
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatattagt 19
Query: 97 ttacggaggtagta 110
|||| |||| ||||
Sbjct: 18 ttacagagggagta 5
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 73.8 bits (37), Expect = 5e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 36 gtaaactaatataagaatgtttagattactactttagtattctaaacgctcttatattag 95
|||||||||||||||| |||||||| |||| |||||| || ||||||||||||||||
Sbjct: 79 gtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttatattaa 20
Query: 96 tttacggaggtagtaga 112
||||| |||| ||||||
Sbjct: 19 tttacagagggagtaga 3
Score = 73.8 bits (37), Expect = 5e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||||||||| |||||||||| |||| ||| |||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 86 cttatattagtttacggaggt 106
|||||||||||||||||||||
Sbjct: 65 cttatattagtttacggaggt 85
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 32 ctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttata 91
||||||||| ||||||||| |||||||| ||||||| ||| ||||||||||||||||
Sbjct: 83 ctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctcttata 24
Query: 92 ttagtttacggaggtagtag 111
|| ||||| ||||||||||
Sbjct: 23 tttctttacagaggtagtag 4
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 69.9 bits (35), Expect = 8e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 40 actaatataagaatgtttagattactactttagtattctaaacgctcttatattagttta 99
|||||||||||| |||||||| |||| |||| | |||||| |||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 100 cggaggtagta 110
|||||| ||||
Sbjct: 124 cggagggagta 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 77 ctaaacgctcttatattagtttacggaggtagta 110
|||||||||||||||||||||||| |||| ||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataaga 51
||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 55 tttagattactactttagtattctaaacgctcttatattagtttacggaggtagta 110
||||||| ||||||||||| |||||| |||||||||||||||||| |||| ||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 76 tctaaacgctcttatattagtttacggaggtagta 110
|||||||||||||||||||||||| ||||| ||||
Sbjct: 62 tctaaacgctcttatattagtttaaggagggagta 96
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataaga 51
||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| ||||| ||||||||| ||||||||| ||||||||||| |||| |||||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 86 cttatatt 93
||||||||
Sbjct: 29 cttatatt 22
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactact--ttagtattctaaacg 83
||||| |||||||||||||||||||| ||||||| |||||| ||||| |||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 84 ctcttatattagtttacggagg 105
|||||||||||||||| ||||
Sbjct: 31 gtcttatattagtttacagagg 10
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 27 actctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctc 86
|||| ||| |||||||||||||||| |||||||| || | |||| | ||| |||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 87 ttatattagtttac 100
||||||||||||||
Sbjct: 28 ttatattagtttac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 76 tctaaacgctcttatattagtttacggagg 105
||||||| ||||||||||||||||||||||
Sbjct: 55 tctaaactctcttatattagtttacggagg 84
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 32 ctctgtaaactaatataagaatgtttagattactactttagtattctaaacgctcttata 91
|||||||||| ||||||||| |||||||| ||||||||||| |||| || ||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70
Query: 92 tt 93
||
Sbjct: 71 tt 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 43 aatataagaatgtttagattactactttagtattctaaacgctcttatattagtttac 100
||||||||| ||| ||||| |||| |||| |||||||||||||||||| ||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttac 15
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||||||||||||||||||| ||||||| ||||| ||| | ||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgct 30
Query: 86 cttatattagttta 99
|||||||||||||
Sbjct: 29 tttatattagttta 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 76 tctaaacgctcttatattagtttacggaggtagta 110
|||||| |||||||||||||||||| |||| ||||
Sbjct: 54 tctaaatgctcttatattagtttacagagggagta 88
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| |||| |||| ||||||||| ||||||| ||||||||||| ||||||||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 86 cttatattagtttacggaggtagta 110
|||||||| ||||| |||| ||||
Sbjct: 29 cttatatttctttaccgagggagta 5
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaac 82
||||| ||||||||| ||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaac 31
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| |||||||||||||||| ||||||| ||||| ||||| |||||| |||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 86 cttatattagtttacggagg 105
|||||||||||||| ||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 76 tctaaacgctcttatattagtttacggaggtagtag 111
|||||| ||||||||||||||||||||||| |||||
Sbjct: 53 tctaaatgctcttatattagtttacggagggagtag 88
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 acgctcttatattagtttacggaggtagtag 111
||||||||||||||||||||||||| |||||
Sbjct: 33 acgctcttatattagtttacggagggagtag 63
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataaga 51
||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaga 30
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| ||||||||| ||||||||| ||||||| ||||||||||| |||||||
Sbjct: 90 ttactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacat 31
Query: 85 tcttatattagtttacggaggtagta 110
||||||||| | |||||||| ||||
Sbjct: 30 tcttatatttctgtacggagggagta 5
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 25 ttactctctctgtaaactaatataagaatgttt 57
|||||| |||||||||||||||||||| |||||
Sbjct: 4 ttactccctctgtaaactaatataagagtgttt 36
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 aaacgctcttatattagtttacggaggtagta 110
|||||||||||||||||||||| |||| ||||
Sbjct: 65 aaacgctcttatattagtttacagagggagta 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 63 actactttagtattctaaacgctcttatattagtttacggagg 105
|||| |||||| |||||| |||||||||||||||||| ||||
Sbjct: 52 actattttagtgatctaaatgctcttatattagtttacagagg 10
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 26 tactctctctgtaaactaatataaga 51
||||| ||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataaga 71
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 62 tactactttagtattctaaacgctcttatattagtttac 100
||||||| |||| ||||||||||||||||||| |||||
Sbjct: 44 tactactctagtgatctaaacgctcttatattattttac 82
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 26 tactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgct 85
||||| ||| ||||| ||||||||| |||||| | ||||||| ||| ||| ||||||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 86 cttatattagtttac 100
|||||||| ||||||
Sbjct: 65 cttatatttgtttac 79
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 77 ctaaacgctcttatattagtttacggaggtagta 110
||||||||||||||||| |||||||||| ||||
Sbjct: 38 ctaaacgctcttatatttctttacggagggagta 5
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 25 ttactctctctgtaaactaatataagaatgtttagattactactttagtattctaaacgc 84
|||||| ||| |||||||||||||| | | |||| | | || ||||||| | |||| ||
Sbjct: 90 ttactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgc 31
Query: 85 tcttatattagtttacggaggtagta 110
| |||||||||||||| |||| ||||
Sbjct: 30 ttttatattagtttacagagggagta 5
