miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 66 tttatattagattacagagggagta 90
|||||||||| |||| |||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| |||||||||||||| ||| |||||| |||| |||| |||| |||
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 66 tttatattagattacagagggagtaa 91
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacagagggagtaa 90
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 66 tttatattagattacagagggagta 90
||||||||| |||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
|||||||||| |||||||||||||||||| |||||| |||| |||| |||| ||||
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 31
Query: 65 ctttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||||||| |||||||||||||||||| |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 66 tttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
||||||||||||||||||||||||||||| ||||||||||| |||| |||| |||
Sbjct: 90 ctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgc 31
Query: 65 ctttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||| |||||||||||||||| ||| |||||| ||||||||||||| |||| ||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 66 tttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| | ||
Sbjct: 4 ctactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgc 63
Query: 65 ctttatattagattacagagggagta 90
|||||||||| |||||| |||||||
Sbjct: 64 ttttatattagtttacagggggagta 89
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||| ||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 66 tttatattagattacagaggga 87
||||||||| |||| ||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcctttaga 40
|||||| |||||||||||||||||| ||||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttaga 39
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 66 tttatattagattacagagggagtaa 91
||||||||| |||| ||||||||||
Sbjct: 65 cttatattagtttacggagggagtaa 90
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| |||||||||||||||||| ||||||| |||| |||||| |||| | ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 66 tttatattagattacagagggagtaa 91
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtaa 4
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||||||||||||||||||||| |||||||||||| ||||||| | || | |
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 66 tttatattagattacagagggagta 90
|||||||||| ||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 50.1 bits (25), Expect = 5e-06
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||| || |||| || |||| |||| |||| || |
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 66 tttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 89.7 bits (45), Expect = 6e-18
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||| ||| ||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 66 tttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcacta 45
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||||| | ||||||||||||||||||| |||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 66 tttatattagattacagaggga 87
||||||||| |||||||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||||||||||| | ||||||||||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcacta 45
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| ||||||||||||||||| ||||||| ||||||||||| |||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 66 tttatattagattacagagggagta 90
|||||||||| ||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||| | | |||||||||||| ||||| |||| || |
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 66 tttatattagattacagagggagtaa 91
||||||||| |||| ||||||||||
Sbjct: 29 cttatattagtttacggagggagtaa 4
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||| ||||||||||||||||||||||| |||||||||||| |||||| ||| ||||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 66 tttatattagattacagagggagta 90
||||||||| |||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcacta 45
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 81.8 bits (41), Expect = 1e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
|||||||||| |||||||||||||||||| ||||||||||||| ||||| |||| | ||
Sbjct: 88 ctactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgc 30
Query: 65 ctttatattagattacagagg 85
|||||||||| |||||||||
Sbjct: 29 ttttatattagtttacagagg 9
Score = 56.0 bits (28), Expect = 8e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||||||| ||| ||||||||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcacta 44
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 79.8 bits (40), Expect = 6e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagt 53
|||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagt 52
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcacta 49
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 79.8 bits (40), Expect = 6e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactt 49
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactactt 45
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| |||||||||||||||||| |||||| |||| |||||| |||| || |
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 66 tttatattagattacagagggagta 90
|||||||||| ||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||| || ||||||| |||| ||| ||||| ||||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatag--ttctaaacgct 62
Query: 66 tttatattagattacagagggagta 90
||||||||| |||| |||||||||
Sbjct: 63 cttatattagtttacggagggagta 87
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 73.8 bits (37), Expect = 4e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
|||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcacta 45
Score = 60.0 bits (30), Expect = 5e-09
Identities = 76/92 (82%), Gaps = 7/92 (7%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagc-------ctttagatcactactttagtattct 58
||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 96 tactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatct 37
Query: 59 agacgcctttatattagattacagagggagta 90
| | || ||||||||| ||||||||||||||
Sbjct: 36 aaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||||||||||||||||| ||| |||||||||||| |||| || |||| | ||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 66 tttatattagattacagagggagta 90
||||||||| ||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| ||||||||||||||||| ||||||| | || |||| |||| | ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 66 tttatattagattacagagggagta 90
|||||||||| ||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| ||||||||||||||||| |||||| |||||||| |||| |||| | |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 66 tttatattagattacagagggagtaaaaa 94
||||||||| |||| |||||||||||||
Sbjct: 29 cttatattagtttacggagggagtaaaaa 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagat 41
||||||||| |||||||||||||||| | |||||||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagat 40
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| ||||| |||||||||||| ||||||| ||||||||||| |||| ||||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 66 tttatattagattacagagggagta 90
||||| ||| ||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
||||||| ||||||||||| ||||||||| |||||||||||| ||||| |||| ||||
Sbjct: 90 ctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgc 31
Query: 65 ctttatattagattacagagggagta 90
|||||||| |||| |||||||||
Sbjct: 30 tcttatattaatttacggagggagta 5
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 71.9 bits (36), Expect = 1e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 3 agctactccctctgtaaactaatataagagcctttagatcacta 46
|||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 2 agctaccccctctgtaaactaatataagagcatttagatcacta 45
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagc 33
||||||||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagc 69
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagagcctttagatcactactttagtattctagacgcctttat 70
|||| |||||||||||||||||| |||||||||||| |||||| || | |||| ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attagattacagagggagta 90
|||| ||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 60.0 bits (30), Expect = 5e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcacta 46
|||||||||||||||| |||||||||||| ||| ||||||||
Sbjct: 4 ctactccctctgtaaattaatataagagcgtttggatcacta 45
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 69.9 bits (35), Expect = 6e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactact 48
|||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactact 49
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||||||||||| | ||||||||||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcacta 45
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 12 ctctgtaaactaatataagagcctttagatcactactttagtattctagac 62
|||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagac 61
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcctttagatcactactttagtattctagacgcctttatattag 75
|||||||||||||||||| |||||| ||||| ||||||| |||| | | |||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 76 attacagagggagta 90
||||||||||||||
Sbjct: 19 tttacagagggagta 5
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattacta 45
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
|||||||||| |||||||||||||||||| |||||| ||||| |||||| |||| || |
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacac 31
Query: 65 ctttatattagattacagagggagta 90
||||||| | ||| ||||||||||
Sbjct: 30 tcttatattggtttatagagggagta 5
Score = 65.9 bits (33), Expect = 9e-11
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||| ||||| |||||||||| |||||||||||| |||| ||||| ||||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 66 tttatattagattacagagggagta 90
||||||||| |||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 9 tccctctgtaaactaatataagagcctttagatcactactttagtattctagacgccttt 68
|||||| ||||| ||||||||||| |||||||||||| ||||| |||| ||||| ||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 69 atattagattacagagggagta 90
||||| | ||||||||||||||
Sbjct: 26 atatttgtttacagagggagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatc 42
|||||||||||||||| |||||||| || ||||||||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatc 41
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 63.9 bits (32), Expect = 3e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| ||||| ||||||||||| ||| |||||||| |||||| |||| ||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 66 tttatattagattacagagggagt 89
||||||||| |||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcctttagatcacta 46
|||||||| |||||||||||||||||| ||||||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 63.9 bits (32), Expect = 3e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagt 53
||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagt 40
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactacttta 51
|||||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactatttta 50
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatca 43
|||||||||| |||||||||||||||||| |||| ||||
Sbjct: 90 ctactccctcggtaaactaatataagagcatttaaatca 52
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||| |||||||||||||| ||| |||||| |||| |||||| |||| || |
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 66 tttatattagattacagagggagta 90
||||||||| ||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
||||||||||||||||||||||||||| ||||||| |||| ||| ||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatag--ttctaaacgct 62
Query: 66 tttatattagattacagagggagta 90
||||||||| |||| |||||||||
Sbjct: 63 attatattagtttacggagggagta 87
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttag 39
|||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttag 38
Score = 60.0 bits (30), Expect = 5e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatca 43
||||||||| |||||||||||||||||| |||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatca 97
Score = 54.0 bits (27), Expect = 3e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 20 actaatataagagcctttagatcactactttagtattctagacgcctttatattagatta 79
|||||||||||||| |||||||||||| |||| | |||| | || ||||||||| |||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 cagagggagta 90
| |||||||||
Sbjct: 124 cggagggagta 134
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgc 64
|||||||||| ||||| |||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 90 ctactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgc 31
Query: 65 ctttatattagattacagagggagta 90
||||||| ||||||| ||||||
Sbjct: 30 tcttatatttctttacagaaggagta 5
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
|||||||| |||||| |||||||||||| ||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcacta 52
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactact 48
|||||||||||| || ||||| ||||| ||||||||||||||
Sbjct: 5 tactccctctgtgaataaatatgagagcgtttagatcactact 47
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagtattctagacgcc 65
|||||||||| |||| ||||||||||| ||||||| ||||||||||| |||| ||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 66 tttatattagattacagagggagta 90
||||||| |||| |||||||||
Sbjct: 29 cttatatttctttaccgagggagta 5
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 10 ccctctgtaaactaatataagagcctttagatcactactttagtattctagacgccttta 69
||||||||||| ||||||||||| ||||||||||||||| ||| |||| |||| |||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 70 tattagattacagagggagta 90
|||| ||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 5 ctactccctctgtaaactaatataagagcctttagatcact 45
||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 4 ctactacctctgtaaagaaatataagagcgtttagatcact 44
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta 43
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatca 43
||||||||||||||| ||||||||||| |||||||||
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca 42
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagc 33
||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagc 32
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 4 gctactccctctgtaaactaatataagagc 33
||||||||||| ||||||||||||||||||
Sbjct: 64 gctactccctccgtaaactaatataagagc 35
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 8e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactttagt 53
||||||||||||||| ||||||||| | ||||||| |||||||||||
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagt 42
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagag 32
|||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagc 33
||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcctttagatcac 44
|||||||| ||||||||||||||||| ||||||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcac 51
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcctttagatca 43
||||| ||||||||||||||||||| || ||||||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatca 42
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 5 tactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagccttta 38
|||||||||||||||||||||||| ||| ||||
Sbjct: 5 tactccctctgtaaactaatataaaagcattta 37
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 48.1 bits (24), Expect = 2e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcctttagatcactactt 49
||||||||| ||||| ||||||||||| ||||| |||||||||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactactt 48
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 46.1 bits (23), Expect = 8e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 8 ctccctctgtaaactaatataagagcctttagatcacta 46
||||||||||||| ||||||||| | ||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
