miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 135 bits (68), Expect = 1e-31
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||| |||| | |||| || | ||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||| ||||||||||||||| |||||||| |||| ||||||| |||||||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 cttatattantttacggaggga 97
||||||||| ||||||||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagagcattta 48
|||||| |||||||||||||||||| ||||
Sbjct: 8 tccctccgtaaactaatataagagcgttta 37
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 119 bits (60), Expect = 8e-27
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||||| | |||| ||||||| |||| |||||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 119 bits (60), Expect = 8e-27
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||| |||| || |||| |||| | |||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 14 aatactccctctgtaaactaatataagagcatttanatcactactttantattctaaacg 73
|||||| |||||||||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 91 aatacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacg 32
Query: 74 ctcttatattantttacggagggagta 100
||||||||||| |||||||||||||||
Sbjct: 31 ctcttatattagtttacggagggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||| |||| |||||| || | |||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 14 aatactccctctgtaaactaatataagagcatttanatcactactttantattctaaacg 73
|||||||||||||||||||||||||| |||||||| ||||||| |||| || |||||| |
Sbjct: 3 aatactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatg 62
Query: 74 ctcttatattantttacggagggagta 100
||||||||||| |||| ||||||||||
Sbjct: 63 ctcttatattagtttatggagggagta 89
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||||||| || | || || | |||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 113 bits (57), Expect = 5e-25
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||||||||||||||||||||||||||||||| | |||||||||||| | |||||| ||
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgc 63
Query: 75 tcttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||| |||||||||||||||| ||||||| || | ||| || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||| |||||||||||||||| |||||||| | |||||||||| || ||||||||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||||||| |||| || |||| || | ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| | |||||||
Sbjct: 65 tttatattagtttacagggggagta 89
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 14 aatactccctctgtaaactaatataagagcatttanatcactactttantattctaaacg 73
|||||||||||||||||||||||||||||| ||| |||||||||||| | ||||| ||
Sbjct: 3 aatactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcg 62
Query: 74 ctcttatattantttacggagggagta 100
||||||||||| ||||| |||||||||
Sbjct: 63 ctcttatattagtttacagagggagta 89
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||||||| ||| ||||||| || | ||||| ||||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 103 bits (52), Expect = 5e-22
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 12 ttaatactccctctgtaaactaatataagagcatttanatcactactttantattctaaa 71
||||||||||||| |||||||||||||||||||||| | |||||||| | || ||||||
Sbjct: 93 ttaatactccctccataaactaatataagagcatttagaacactacttcagtaatctaaa 34
Query: 72 cgctcttatattantttacggagggagta 100
| |||||||||| |||||||||||||||
Sbjct: 33 tgttcttatattagtttacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||| |||||| || ||| || | ||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| |||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||| | |||||| ||||||| || || ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||||||||||||||| |||| || ||||||||| | |||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 95.6 bits (48), Expect = 1e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||||||||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| |||| | ||||||||
Sbjct: 29 tttatattagtttatgaagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 tctaaacgctcttatattantttacggagggagta 100
|||||| |||||||||||| ||||| |||||||||
Sbjct: 54 tctaaatgctcttatattagtttacagagggagta 88
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 95.6 bits (48), Expect = 1e-19
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||| ||| ||||||||||||||| |||| |||||||||||| | ||||||||||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 14 aatactccctctgtaaactaatataagagcatttanatcactactttantattctaaacg 73
|||||||||||||||||||||||||||||| |||| ||||||| || | ||||||||
Sbjct: 3 aatactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacg 62
Query: 74 ctcttatatta 84
|||||||||||
Sbjct: 63 ctcttatatta 73
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||| ||||||||||| ||||||||| |||| ||||||| || || ||||||||||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||||||||| ||||| |||||||||||| |||| || ||||||||| | |||||||||
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 75 tcttatattantttacggagggagta 100
||||||| || ||||| || ||||||
Sbjct: 64 tcttatagtagtttacagacggagta 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||||| | |||| |||||||||||| | |||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 cttatattantttacggaggga 97
||||||||| ||||| ||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 67.9 bits (34), Expect = 3e-11
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagagcatttanatcactactttantattctaaacgctctt 78
||||||||||||||||||||||| | |||| ||||||| || | |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattantttacggagggagtanaat 104
|||||| ||||| ||||||||| |||
Sbjct: 68 atattagtttacagagggagtacaat 93
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||||||||||||||||||||| |||| || || | ||||||| ||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||||||||||||||| |||| ||||||| |||| | | |||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||| ||||| |||||||||| |||| ||||||| || | |||||||||||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||| |||| | ||||| |||| | ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 cttatattantttacggagggagta 100
|||||||| |||| |||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||| |||| |||||||||||||||| || ||||||||| | ||||||||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttaccgagggagta 5
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 21 cctctgtaaactaatataagagcatttanatcactactttantattctaaacgctcttat 80
|||| |||||||||||||||||| |||| ||||||| |||| | || ||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attantttacggagggagta 100
|||| ||||| |||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||| |||||||||||| ||| ||||||| || | ||||||||||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 cttatattantttacggagg 95
||||||||| ||||||||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 26 gtaaactaatataagagcatttanatcactactttantattctaaacgctcttatattan 85
||||||||||||||||||||||| | ||||| |||| || |||||| |||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 86 tttacggagggagta 100
||||| |||||||||
Sbjct: 19 tttacagagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||||||||||||||| ||||| || |||| || | ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 cttatattantttacggaggga 97
||||||||| |||||| |||||
Sbjct: 65 cttatattagtttacgaaggga 86
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 30 actaatataagagcatttanatcactactttantattctaaacgctcttatattanttta 89
|||||||||||||| |||| ||||||| |||| | |||||| |||||||||||| ||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 90 cggagggagta 100
|||||||||||
Sbjct: 124 cggagggagta 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||||||||| ||||||||||||||||||||||| |||| || || | |||||||||
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 75 tcttatatta 84
||||||||||
Sbjct: 75 tcttatatta 66
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcattta 48
|||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgttta 37
Score = 54.0 bits (27), Expect = 4e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 67 ctaaacgctcttatattantttacggagggagta 100
|||||||||||||||||| ||||| |||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||||||||||||||| |||| ||||||| |||| || | |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
||||||||||||||||||||||||| || |||| || |||| || | ||||||| |
Sbjct: 90 atactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacac 31
Query: 75 tcttatattantttacggagggagta 100
|||||||||| ||||| |||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataagagcatttanatcactactttantattctaaacgctc 76
|||||||| |||||||||||||||||| |||| ||||||| || | || |||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattantttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||| ||||||||||| ||| ||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 cttatattantttacggagggagt 99
||||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 77.8 bits (39), Expect = 3e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||||||||||||||||||||| |||||||| ||| | |||||| |||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 76 cttatattantttacggagg 95
|||||||| ||||| ||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 77.8 bits (39), Expect = 3e-14
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 cctctgtaaactaatataagagcatttanatcactactttantattctaaacgctcttat 80
||||||||||||||||||| |||||||| ||||||| || | |||||| ||||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcacta-agtagtgatctaaatgctcttat 67
Query: 81 attantttacggagggagta 100
|||| |||||||||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||||||||||||||| |||| || |||| || | ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattantttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 63 attatattagtttacggagggagta 87
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||| ||| |||| | |||| |||| | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||| ||||||||||| ||||||||||| |||| |||||||||| | | |||||||||
Sbjct: 90 atacaccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgc 31
Query: 75 tcttatattantttacggagggagta 100
||||||||| ||||| |||| ||||
Sbjct: 30 tcttatatttctttacagaggtagta 5
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||| || |||| || |||| || | ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattantttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 63 cttatattagtttacggagggagta 87
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||||||| |||| | |||| |||| | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactact--ttantattctaaacg 73
|||||||||||||||||||||||||| | |||| ||||||||| ||| | |||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 74 ctcttatattantttacggaggga 97
|||||||||| ||||| ||||||
Sbjct: 31 gtcttatattagtttacagaggga 8
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/88 (82%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagagcatttanatcactactt--tantattctaaacgctc 76
||||||||||||||||||||||| | |||| ||||||| | || | |||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattantttacggagggagtanaat 104
|||||||| ||||| ||||||||| |||
Sbjct: 68 ttatattagtttacagagggagtacaat 95
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||| ||||||||| |||||| || ||||||||| | ||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 76 cttatattantttacggagggagta 100
|||||||| | |||||||||||||
Sbjct: 29 cttatatttctgtacggagggagta 5
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 20 ccctctgtaaactaatataagagcatttanatcacta 56
||||||||||||||||||||||||||||| |||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcacta 45
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagc 43
||||||||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagc 69
Score = 50.1 bits (25), Expect = 6e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 69 aaacgctcttatattantttacggagggagta 100
|||||||||||||||| ||||| |||||||||
Sbjct: 65 aaacgctcttatattagtttacagagggagta 96
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcacta 56
|||||||||||||||||||||||||||| |||| |||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcacta 45
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 45 tttanatcactactttantattctaaacgctcttatattantttacggagggagta 100
|||| |||||||||||| | |||||| |||||||||||| ||||| |||||||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 22 ctctgtaaactaatataagagcatttanatcactactttantattctaaacgctcttata 81
|||||||||| ||||||||||| |||| |||||||||||| | |||| || ||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70
Query: 82 ttantttacggagggagta 100
|| ||| ||||| |||||
Sbjct: 71 tttctttgcggagtgagta 89
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataagagcatttanatcactactttantattctaaacgctc 76
|||||||| ||||||||||||||||| |||| ||||| | |||| | ||| |||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattantttac 90
|||||||| |||||
Sbjct: 28 ttatattagtttac 15
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagagcatttanatcactactttantattctaaacgctctt 78
||||| ||||||||||||||||||| || | |||| || | | ||||||| |||||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 79 atattantttacggagggagt 99
|||||| ||||||||||||||
Sbjct: 68 atattagtttacggagggagt 88
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||||||||||| |||||||| || |||| || | || |||| |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 cttatattantttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| |||||||||||||| | ||||| | || || |||| || | |||| |||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 13 taatactccctctgtaaactaatataagagca 44
||||||||||||||||||||||||||||||||
Sbjct: 2 taatactccctctgtaaactaatataagagca 33
Score = 54.0 bits (27), Expect = 4e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 acgctcttatattantttacggagggagta 100
|||||||||||||| |||||||||||||||
Sbjct: 33 acgctcttatattagtttacggagggagta 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagc 43
||||||||| ||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataagagc 35
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||| ||||| |||||||||| |||| || ||||||||| | |||| |||||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 76 cttatattantttacggagggagtanaat 104
|||||||| ||||| || |||||| |||
Sbjct: 29 cttatatttctttacagaaggagtacaat 1
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||| |||||||| ||||||||||| | || ||||||| || | ||||||| ||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 76 cttatattantttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 19 tccctctgtaaactaatataagagcatttanatcactactttantattctaaacgctctt 78
|||||| ||||| ||||||||||| |||| ||||||| |||| ||||||||| |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 79 atattantttacggagggagta 100
||||| ||||| |||||||||
Sbjct: 26 atatttgtttacagagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
|||||||||||||||| |||||||| || |||| ||| ||| || | ||||||||||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 76 cttatattantttacggaggga 97
|||||||| ||||| ||||||
Sbjct: 65 cttatatttctttactgaggga 86
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||| |||||||||| |||| |||||||||||| | |||||| |
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaa--ca 30
Query: 76 cttatattantttacggagggagta 100
|||| ||| |||||||||||||||
Sbjct: 29 cttacatttatttacggagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/85 (82%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgct 75
||||||||||||||| ||||||||||| |||| ||||||| | ||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30
Query: 76 cttatattantttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/86 (81%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||||||||||||||| ||||||||||| |||| |||| || | |||||||||
Sbjct: 4 atactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgc 57
Query: 75 tcttatattantttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 58 tcttatatttctttacagagggagta 83
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 54.0 bits (27), Expect = 4e-07
Identities = 74/90 (82%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 14 aatactccctctgtaaactaatataagagcatttanatcactactt---tantattctaa 70
|||||||||||||| || ||||| ||||| |||| ||||||||| || | |||||
Sbjct: 3 aatactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaa 62
Query: 71 acgctcttatattantttacggagggagta 100
|||||||||||||| ||||| ||||||||
Sbjct: 63 acgctcttatattattttacatagggagta 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagcatttanatcacta 56
|||||||| |||||| |||||||||||| |||| |||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcacta 52
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 54.0 bits (27), Expect = 4e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataagagcatttanatcactactttantattctaaacgc 74
|||||||||| ||||| ||||||||||| |||| ||||||||| | | ||| |||||
Sbjct: 4 atactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgc 63
Query: 75 tcttatatt 83
|||||||||
Sbjct: 64 tcttatatt 72
Score = 54.0 bits (27), Expect = 4e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 67 ctaaacgctcttatattantttacggagggagta 100
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctaaacgctcttatatttctttacggagggagta 5
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagag 42
|||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagagc 43
||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47
Score = 44.1 bits (22), Expect = 4e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 72 cgctcttatattantttacggagggagta 100
||||||||||||| ||||| |||||||||
Sbjct: 46 cgctcttatattagtttaccgagggagta 74
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 18 ctccctctgtaaactaatataagagcatttanatcacta 56
||||||||||||| ||||||||| |||||| |||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataagagcatttanatcacta 56
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Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;AK250375.1/999-905 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 ttaatactccctctgtaaactaatataaga 41
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Sbjct: 1 ttaatactccctctgtaacttaatataaga 30
