miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 123 bits (62), Expect = 5e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgc 63
Query: 75 tcttatattaatttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 64 tcttatatttctttacggagggagta 89
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||| |||||||||||||||||||||||| ||||||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 123 bits (62), Expect = 5e-28
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 23 tctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatat 82
|||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 82 tctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttatat 23
Query: 83 taatttacggagggagta 100
|| |||||||||||||||
Sbjct: 22 tagtttacggagggagta 5
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||| ||||| |||||| |||||||||||| ||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 119 bits (60), Expect = 8e-27
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 cttatattaatttacggagggagtagtt 103
||||||||| ||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagtagtt 92
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||| |||||| |||| ||||||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 117 bits (59), Expect = 3e-26
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct: 4 atactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgc 63
Query: 75 tcttatattaatttacggagggagtag 101
|||||||||| ||||| ||||||||||
Sbjct: 64 tcttatattagtttacagagggagtag 90
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 113 bits (57), Expect = 5e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 cttatattaatttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||| ||||||| |||| |||||||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 17 actccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacactc 76
||||| || |||||||||||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattaatttacggagggagta 100
||||||||||||||||||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||| ||||||||||| ||| |||||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 cttatattaatttacggagggagt 99
||||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 29 aactaatataagagcatttagatcactactttagtgatctaaacactcttatattaattt 88
||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 89 acggagggagta 100
|| |||||||||
Sbjct: 16 acagagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgc 63
Query: 75 tcttatatta 84
||||||||||
Sbjct: 64 tcttatatta 73
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 26 gtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaa 85
|||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||
Sbjct: 79 gtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttatattaa 20
Query: 86 tttacggagggagtag 101
||||| ||||||||||
Sbjct: 19 tttacagagggagtag 4
Score = 87.7 bits (44), Expect = 3e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||| |||||||||||| ||| |||||||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 cttatattaatttacggagg 95
||||||||| ||||||||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 109 bits (55), Expect = 8e-24
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 24 ctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatatt 83
|||||||||||||||| |||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 81 ctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctcttatatt 22
Query: 84 aatttacggagggagtagt 102
| ||||| |||||||||||
Sbjct: 21 agtttacagagggagtagt 3
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||||| ||||||| |||| ||||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| | |||||||
Sbjct: 65 tttatattagtttacagggggagta 89
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||||||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 76 cttatattaatttacggagggagtag 101
||||||||| ||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagtag 4
Score = 87.7 bits (44), Expect = 3e-17
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||||||||||||||| |||||||||||| |||| |||| |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 cttatattaatttacggagggagtagtt 103
||||||||| ||||| ||||||||||||
Sbjct: 65 cttatattagtttaccgagggagtagtt 92
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||| | |||||||||||||| |||| |||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||||||||||||||| ||||||| ||||||||||||||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 105 bits (53), Expect = 1e-22
Identities = 81/89 (91%), Gaps = 1/89 (1%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgct 30
Query: 76 cttatattaatttacggagggagtagttg 104
|||||||| |||| | ||||||||||||
Sbjct: 29 tttatattagtttatgaagggagtagttg 1
Score = 60.0 bits (30), Expect = 7e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 27 taaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaat 86
||||||||||||| ||| ||||||||| || | ||||||||||| ||||||||||| |
Sbjct: 16 taaactaatataaaagcgtttagatcattaagt-agtgatctaaatgctcttatattagt 74
Query: 87 ttacggagggagta 100
|||| |||||||||
Sbjct: 75 ttacagagggagta 88
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||| ||||||||| |||||||||||| |||| |||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 76 cttatattaatttacggagggagta 100
|||||||||||||||||||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 93.7 bits (47), Expect = 5e-19
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||||| |
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 75 tcttatattaatttacggagggagtag 101
||||||| || ||||| || |||||||
Sbjct: 64 tcttatagtagtttacagacggagtag 90
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 26 gtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaa 85
||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 86 tttacggagggagta 100
||||| |||||||||
Sbjct: 19 tttacagagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||||||||||||||| |||||||| |||| ||||| |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 cttatattaatttacggaggga 97
||||||||| |||||| |||||
Sbjct: 65 cttatattagtttacgaaggga 86
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 99.6 bits (50), Expect = 8e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| | ||||||||||||||| ||||||||||||| ||||||||| ||||||| ||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 cttatattaatttacggaggga 97
||||||||| ||||||||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 26 gtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaa 85
|||||||||||||||||| |||||| |||| || ||||||||| || ||||||||
Sbjct: 15 gtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgcttttatattag 74
Query: 86 tttacggagggagta 100
||||| ||||||||
Sbjct: 75 tttacaaagggagta 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 99.6 bits (50), Expect = 8e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 cttatattaatttacggaggga 97
||||||||| ||||| ||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatat 82
||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||
Sbjct: 12 tctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatat 71
Query: 83 taatttacggagggagta 100
|| ||||| |||||||||
Sbjct: 72 tagtttacagagggagta 89
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 99.6 bits (50), Expect = 8e-21
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatat 82
||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 12 tctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatat 71
Query: 83 taatttacggagggagta 100
| ||| ||||| |||||
Sbjct: 72 ttctttgcggagtgagta 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 33 aatataagagcatttagatcactactttagtgatctaaacactcttatatt 83
|||||||||| | |||||||||| ||||||||||||| ||||||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatt 22
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 99.6 bits (50), Expect = 8e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| ||||||||||||||||| |||||||||||||||| |||| | ||||||| |
Sbjct: 4 atactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgc 63
Query: 75 tcttatattaatttacggagggagta 100
|||||||||| |||| ||||||||||
Sbjct: 64 tcttatattagtttatggagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 27 taaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaat 86
||||||||||||||||||||||||| | || |||||||||||| || |||||||| |
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatattagt 19
Query: 87 ttacggagggagta 100
|||| |||||||||
Sbjct: 18 ttacagagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 99.6 bits (50), Expect = 8e-21
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatat 82
||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||
Sbjct: 11 tctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttatat 69
Query: 83 taatttacggagggagtagttg 104
|| |||||||||||||||||||
Sbjct: 70 tagtttacggagggagtagttg 91
Score = 87.7 bits (44), Expect = 3e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 76 cttatattaatttacggagg 95
|||||||| ||||| ||||
Sbjct: 28 tttatattagtttacagagg 9
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||||| | |||||||||||| |||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||| ||| |||||| |||| ||||||||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| |||| |||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
Score = 87.7 bits (44), Expect = 3e-17
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||| ||||| |||||||||| |||||||||||| ||||| ||||||| ||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 cttatattaatttacggagggagtagtt 103
||||||||| ||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagtagtt 92
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| | |||||||||||||
Sbjct: 29 cttatatttctgtacggagggagta 5
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 93.7 bits (47), Expect = 5e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 30 actaatataagagcatttagatcactactttagtgatctaaacactcttatattaattta 89
|||||||||||||| |||||||||||| |||| ||||||||| ||||||||||| ||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 90 cggagggagta 100
|||||||||||
Sbjct: 124 cggagggagta 134
Score = 83.8 bits (42), Expect = 5e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| || |||||||||||||||||||||||||||| || ||||||||||||| |
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 75 tcttatatta 84
||||||||||
Sbjct: 75 tcttatatta 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
|||||| ||||||||||||||||||||| ||||| ||| | |||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttaggtcataattttaatgatctaaacac 63
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 67 ctaaacactcttatattaatttacggagggagta 100
|||||| ||||||||||| ||||| |||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 27 taaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaat 86
|||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||| |
Sbjct: 78 taaactaatataagagcatttagaacactacttcagtaatctaaatgttcttatattagt 19
Query: 87 ttacggagggagta 100
||||||||||||||
Sbjct: 18 ttacggagggagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||| ||||||||| ||| ||||| |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 cttatattaatttacggagggagta 100
||||||||| |||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 13 ttatactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaac 72
|||||| || |||||||| ||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 92 ttatacaccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaac 33
Query: 73 actcttatattaatttacggagggagtagt 102
|||||||||| ||||| |||| ||||||
Sbjct: 32 gctcttatatttctttacagaggtagtagt 3
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatat 82
|||||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 12 tctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttatat 71
Query: 83 taatttacggaggg 96
| ||||| |||||
Sbjct: 72 ttctttacagaggg 85
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaaca-- 30
Query: 76 cttatattaatttacggagggagta 100
|||| ||| ||||||||||||||||
Sbjct: 29 cttacatttatttacggagggagta 5
Score = 63.9 bits (32), Expect = 4e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 45 tttagatcactactttagtgatctaaacactcttatattaatttacggagggagta 100
|||||||||||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 32 tttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagta 87
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||||||||||||||| |||||||||||| |||||| || |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 14 tatactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaaca 73
|||||||| ||||||||||||||||| || |||| || |||| ||||||||||||||
Sbjct: 91 tatactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaaca 32
Query: 74 ctcttatattaatttacggagggagta 100
||||||||||| ||||| |||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||| |||| ||||||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttaccgagggagta 5
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||| ||||||||||| | |||||||||| |||| |||||||||||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 76 cttatattaatttacggagggagtagtt 103
|||||||| ||||||||||||||||||
Sbjct: 65 cttatatttctttacggagggagtagtt 92
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || ||||| |||||||||| ||||||| ||||||||||||||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| || ||||||
Sbjct: 29 cttatatttctttacagaaggagta 5
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||| ||| |||||| |||| |||||| |||||||||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattaatttacggagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||||||||||||||| ||||||| |||| |||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattaatttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 63 attatattagtttacggagggagta 87
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| || |||||||||||||||||| |||||| |||| |||||| |||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||| || ||||||| |||| |||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 cttatattaatttacggagggagta 100
||||||||| |||||||||||||||
Sbjct: 63 cttatattagtttacggagggagta 87
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactact--ttagtgatctaaaca 73
|||||| ||||||||||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 74 ctcttatattaatttacggaggga 97
|||||||||| ||||| ||||||
Sbjct: 31 gtcttatattagtttacagaggga 8
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcactactt--tagtgatctaaacactcttat 80
||||||||||||||||||| | |||||||||||| | |||||||||||| ||||||
Sbjct: 12 tctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtcttat 71
Query: 81 attaatttacggagggagta 100
|||| ||||| |||||||||
Sbjct: 72 attagtttacagagggagta 91
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 79.8 bits (40), Expect = 7e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 45 tttagatcactactttagtgatctaaacactcttatattaatttacggagggagta 100
||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaa 71
|||||| ||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 25 tgtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatatta 84
||||||||||||||||||| || |||||| || | ||||||||||| |||||||||||
Sbjct: 14 tgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatatta 73
Query: 85 atttacggagggagt 99
||||||||||||||
Sbjct: 74 gtttacggagggagt 88
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 17 actccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacactc 76
||||| || ||||||||||||||||| |||||||||| | |||| |||||| ||| |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattaatttac 90
|||||||| |||||
Sbjct: 28 ttatattagtttac 15
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 33 aatataagagcatttagatcactactttagtgatctaaacactcttatattaatttacgg 92
||||||||||| |||||||||||| ||||| ||||||||| | |||||||| ||||| |
Sbjct: 72 aatataagagcgtttagatcactattttagagatctaaacgcccttatatttgtttacag 13
Query: 93 agggagta 100
||||||||
Sbjct: 12 agggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||| |||||||| || |||||||| ||| ||||||||||||| ||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 76 cttatattaatttacggaggga 97
|||||||| ||||| ||||||
Sbjct: 65 cttatatttctttactgaggga 86
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 79/93 (84%), Gaps = 7/93 (7%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagag-----catttaga--tcactactttagtgatct 68
|||||| |||||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatct 37
Query: 69 aaacactcttatattaatttacggagggagtag 101
||| ||||||||||| ||||| ||||| ||||
Sbjct: 36 aaatgctcttatattagtttacagagggggtag 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 23 tctgtaaactaatataagagcatttagatcacta 56
||||||||||||||||||||||||||||||||||
Sbjct: 12 tctgtaaactaatataagagcatttagatcacta 45
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacac 74
||||||| || ||||| ||||||||||| ||||| ||||||||| |||||||| ||| |
Sbjct: 4 atactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgc 63
Query: 75 tcttatatt 83
|||||||||
Sbjct: 64 tcttatatt 72
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 26 gtaaactaatataagagcatttagatcactactttagtgatctaaacactcttatattaa 85
|||||| ||||||||||| || |||||||| |||||| |||||| ||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 86 tttacggagggagta 100
|||||||||||||||
Sbjct: 19 tttacggagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 63.9 bits (32), Expect = 4e-10
Identities = 73/87 (83%), Gaps = 6/87 (6%)
Strand = Plus / Plus
Query: 14 tatactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaaca 73
|||||||| |||||||| ||||||||||| ||||||||| |||||||||||||
Sbjct: 3 tatactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacg 56
Query: 74 ctcttatattaatttacggagggagta 100
|||||||||| ||||| |||||||||
Sbjct: 57 ctcttatatttctttacagagggagta 83
Score = 60.0 bits (30), Expect = 7e-09
Identities = 71/85 (83%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| |||||||| ||||||||||| |||||||||||| |||||||||| ||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30
Query: 76 cttatattaatttacggagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 61.9 bits (31), Expect = 2e-09
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcactactt---tagtgatctaaa 71
||||||| ||||| || ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 4 atactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaa 63
Query: 72 cactcttatattaatttacggagggagta 100
| ||||||||||| ||||| ||||||||
Sbjct: 64 cgctcttatattattttacatagggagta 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 16 tactccatctgtaaactaatataagagcatttagatcacta---ctttagtgatctaaac 72
|||||| | |||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 73 actcttatattaatttacggagggagta 100
|||| ||||| ||| || |||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactactttagtgatctaaacact 75
|||||| ||||||||||||||||| |||||||| || |||| || || | |||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 cttatattaatttacggagggagta 100
|||||||| |||||||||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 54.0 bits (27), Expect = 4e-07
Identities = 62/74 (83%), Gaps = 6/74 (8%)
Strand = Plus / Minus
Query: 33 aatataagagcatttagatcactact------ttagtgatctaaacactcttatattaat 86
||||||||| |||||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 78 aatataagatcatttagatcactactactattttagtgatctaaacgatcttatatttct 19
Query: 87 ttacggagggagta 100
|||| |||||||||
Sbjct: 18 ttacagagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagcatttagatcacta 56
||||||| |||||||| ||||||||| | ||||||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 52.0 bits (26), Expect = 2e-06
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagagcatttagatcactact---ttagtgatctaaac 72
||||| ||| ||||| ||||||||| | |||||||||||||| ||||||||||| ||
Sbjct: 5 tactctatccgtaaagaaatataagaacgtttagatcactactattttagtgatctagac 64
Query: 73 actcttatattaatttacggagggagta 100
||||| |||| |||||||| ||||||
Sbjct: 65 gctcttgtatttctttacggatggagta 92
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 atactccatctgtaaactaatataagagca 44
||||||| ||||||||||||||||||||||
Sbjct: 4 atactccctctgtaaactaatataagagca 33
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 ctcttatattaatttacggagggagtag 101
||||||||||| ||||||||||||||||
Sbjct: 36 ctcttatattagtttacggagggagtag 63
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 69 aaacactcttatattaatttacggagggagta 100
|||||||||||||||| ||||| |||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 tactccatctgtaaactaatataagag 42
|||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 18 ctccatctgtaaactaatataagagcatttagatcacta 56
|||| |||||||| ||||||||| ||||||||||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
