miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 167 bits (84), Expect = 3e-41
Identities = 87/88 (98%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgc 31
Query: 65 tcttatattagtttacagagggagtact 92
||||||||||||||||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagtact 3
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 145 bits (73), Expect = 1e-34
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||| |||||||| |||| ||| ||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 66 cttatattagtttacagagggagtac 91
|||||||||||||| ||||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 69 atattagtttacagagggagtactt 93
||||||||||||| |||||||||||
Sbjct: 68 atattagtttacaaagggagtactt 92
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 56 tctaaacgctcttatattagtttacagaggga 87
||||||||||||||||||||||||| ||||||
Sbjct: 39 tctaaacgctcttatattagtttacggaggga 8
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
Score = 85.7 bits (43), Expect = 9e-17
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||| |||| |||||||||||||||||| |||||| |||| ||| || |||||||||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 66 cttatattagtttacagagggagtact 92
||||||||||||||| |||||||||||
Sbjct: 29 cttatattagtttacggagggagtact 3
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 119 bits (60), Expect = 7e-27
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 3 atctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaac 62
|||||||||||| ||||||||||||||||||| ||||| |||||| ||| ||||||| |
Sbjct: 92 atctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagc 33
Query: 63 gctcttatattagtttacagagggagta 90
||||||||||||||||||||||||||||
Sbjct: 32 gctcttatattagtttacagagggagta 5
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||||| ||||| |||| ||| ||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
|||||||||| ||||||||||||||||||||||||| ||||||| ||| | |||||| ||
Sbjct: 4 ctactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgc 63
Query: 65 tcttatattagtttacagagggagtactt 93
| |||||||||||||||| ||||||||||
Sbjct: 64 ttttatattagtttacagggggagtactt 92
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||| | |||||||||||||| ||| ||||||| |||| ||| |||||||||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||| ||||||||||||||||| |||||| || |||||||| |||||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 60.0 bits (30), Expect = 5e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||| ||| |||||| |||| || ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 66 cttatattagtttacagagggagtac 91
|||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagtac 90
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 109 bits (55), Expect = 6e-24
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| |
Sbjct: 90 ctactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacac 31
Query: 65 tcttatattagtttacagagggagtac 91
||||||||| ||||| |||||||||||
Sbjct: 30 tcttatattggtttatagagggagtac 4
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||| |||||||||| ||||||| |||||||||| | ||||||||||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 109 bits (55), Expect = 6e-24
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 66 cttatattagtttacagagggagtact 92
|||||||||||| ||| ||||||||||
Sbjct: 65 cttatattagttcaca-agggagtact 90
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 19 aactaatataagagcgtttagaatactaaaatagagatctaaacgctcttatattagttt 78
|||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 79 acagagggagta 90
||||||||||||
Sbjct: 16 acagagggagta 5
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 4 tctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacg 63
||||||||||| ||||| |||||||||||||||| || |||||||||| ||||||||||
Sbjct: 3 tctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacg 62
Query: 64 ctcttatattagtttacagagg 85
||||||||||||||||| ||||
Sbjct: 63 ctcttatattagtttacggagg 84
Score = 95.6 bits (48), Expect = 1e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 11 cctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctcttat 70
|||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attagtttacagagggagta 90
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 7 actccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctc 66
|||||||| ||||||||||||||||||||||||| |||||||||| |||| |||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 67 ttatattagtttacagagggagtac 91
|||||||| ||||| ||||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
Score = 89.7 bits (45), Expect = 6e-18
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| ||||||||||| |||| || |||| ||| ||||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 66 cttatattagtttacagagggagtacttt 94
||||||||||||||| |||||||| ||||
Sbjct: 65 cttatattagtttactgagggagtgcttt 93
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 66 cttatattagtttacagagggagta 90
|||||| ||||||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
Score = 93.7 bits (47), Expect = 4e-19
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 4 tctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacg 63
|||||||| || |||||||| |||||||||||||||| |||||| ||| |||||||||
Sbjct: 91 tctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacg 32
Query: 64 ctcttatattagtttacagagggagta 90
||||||||||| ||||| |||||||||
Sbjct: 31 ctcttatattaatttacggagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 103 bits (52), Expect = 4e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||| || |||| | ||||||| ||| ||||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 66 cttatattagtttacagagggagtactt 93
||||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtactt 2
Score = 65.9 bits (33), Expect = 9e-11
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||| ||||||| |||| ||| || |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 101 bits (51), Expect = 2e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 66 cttatattagt 76
|||||||||||
Sbjct: 74 cttatattagt 64
Score = 73.8 bits (37), Expect = 4e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 57 ctaaacgctcttatattagtttacagagggagtactt 93
|||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagtactt 2
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 20 actaatataagagcgtttagaatactaaaatagagatctaaacgctcttatattagttta 79
||||||||||||||||||||| |||| || |||||||| |||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 cagagggagta 90
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttag 39
||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttag 38
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
|||||||||| |||||||||||||||||| |||| | | |||||||| ||||||||| |
Sbjct: 90 ctactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacac 31
Query: 65 tcttatattagtttacagagggagta 90
|||||||||||||||| |||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
|||||||||||||||||||||||||||| ||||||| |||| || ||| |||| ||
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63
Query: 65 tcttatattagtttacagagggagta 90
|||||||||||||||| |||||||||
Sbjct: 64 tcttatattagtttaccgagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 66 cttatattagtttacagagggagtac 91
|||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
Score = 81.8 bits (41), Expect = 1e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||| | | |||||| |||||| ||| |||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 97.6 bits (49), Expect = 2e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| ||||||||||| |||||| |||||| ||| ||||| || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 65.9 bits (33), Expect = 9e-11
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||||| || ||| |||| ||| |||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 66 cttatattagtttacagagggagta 90
|||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||||||||||||||||| ||||||||||| ||| ||| |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttagaa--ctattttagttatctaaacact 30
Query: 66 cttatattagtttacagagggagtact 92
|||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||| ||||||| |||||||| || ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaat--agttctaaacgct 62
Query: 66 cttatattagtttacagagggagtact 92
|||||||||||||| |||||||||||
Sbjct: 63 attatattagtttacggagggagtact 89
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 66 cttatattagtttacagagggagtact 92
||||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtact 3
Score = 95.6 bits (48), Expect = 1e-19
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||| || ||||||| |||||||||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 66 cttatattagtttacagagggagtact 92
||||||||||||||| |||||||||||
Sbjct: 63 cttatattagtttacggagggagtact 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
|||||| |||||||||||||||| | |||||| |||||| ||| |||||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 69 atattagtttacagagggagtac 91
|||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagtac 90
Score = 79.8 bits (40), Expect = 6e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||| | |||||| |||| ||| |||||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 66 cttatattagtttacagagggagtactt 93
|||||||||||||||||||||| |||||
Sbjct: 29 cttatattagtttacagagggaatactt 2
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 93.7 bits (47), Expect = 4e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||||||||||||||| |||||| ||||||||||| | |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 66 cttatattagtttac 80
|||||||||||||||
Sbjct: 65 cttatattagtttac 79
Score = 85.7 bits (43), Expect = 9e-17
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
||||| ||||||||||||||||||| ||||||| |||| ||| ||||||| |||||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 69 atattagtttacagagggagtac 91
|||||||||||||||||||||||
Sbjct: 26 atattagtttacagagggagtac 4
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 89.7 bits (45), Expect = 6e-18
Identities = 84/96 (87%), Gaps = 7/96 (7%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaata--gagatct---- 58
|||| ||||| |||||||||||||||||| |||||| ||||||||| |||||||
Sbjct: 4 ctaccccctctgtaaactaatataagagcatttagatcactaaaatagtgagatctaaat 63
Query: 59 -aaacgctcttatattagtttacagagggagtactt 93
|||||||||||||||||||||||||||||||||||
Sbjct: 64 gaaacgctcttatattagtttacagagggagtactt 99
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 54 gatctaaacgctcttatattagtttacagaggg 86
|||||||| ||||||||||||||||||||||||
Sbjct: 41 gatctaaatgctcttatattagtttacagaggg 9
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgttt 37
||||||||| ||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 89.7 bits (45), Expect = 6e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||||||||||||||||||| | |||||| |||| || ||| | |||||| |||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||||||| ||||||||||||||||| ||||||| |||| || ||||||| | |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 66 cttatattagtttacagagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 87.7 bits (44), Expect = 2e-17
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
||||||||| | ||||||||||||| |||||||||| | ||| ||| |||||||| ||
Sbjct: 4 ctactcccttcataaactaatataaaagcgtttagatcattaag-tagtgatctaaatgc 62
Query: 65 tcttatattagtttacagagggagtact 92
||||||||||||||||||||||||||||
Sbjct: 63 tcttatattagtttacagagggagtact 90
Score = 60.0 bits (30), Expect = 5e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||||| |||||| ||| | || ||||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgct 30
Query: 66 cttatattagttta 79
|||||||||||||
Sbjct: 29 tttatattagttta 16
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 87.7 bits (44), Expect = 2e-17
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
|||||| ||||| |||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 69 atattagtttacagagggagtact 92
||||| ||||||||||||||||||
Sbjct: 26 atatttgtttacagagggagtact 3
Score = 85.7 bits (43), Expect = 9e-17
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||| |||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 66 cttatattagtttacagagggagtact 92
|||||||| ||||| |||||| ||||
Sbjct: 65 cttatatttctttactgagggactact 91
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 16 gtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctcttatattag 75
||||||||||||||||||||| ||| | |||||| | ||||||||| ||||||||||||
Sbjct: 15 gtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctcttatattag 74
Query: 76 tttacagagggagt 89
||||| ||||||||
Sbjct: 75 tttacggagggagt 88
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 7 actccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctc 66
|||||||||||||||||||||||||| ||||||| || | || ||||| |||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 67 ttatattagtttacagaggga 87
||||||||||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 81.8 bits (41), Expect = 1e-15
Identities = 81/95 (85%), Gaps = 7/95 (7%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaat-------actaaaatagagatct 58
|||||||||| |||||||||||||||||||||||| | |||| ||| |||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatct 37
Query: 59 aaacgctcttatattagtttacagagggagtactt 93
||| |||||||||||||||||||||||||||||||
Sbjct: 36 aaaagctcttatattagtttacagagggagtactt 2
Score = 69.9 bits (35), Expect = 6e-12
Identities = 78/93 (83%), Gaps = 7/93 (7%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagaga-------tct 58
||||||||| |||||||||||||||||| |||||| |||||| ||| || |||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaagtct 64
Query: 59 aaacgctcttatattagtttacagagggagtac 91
||||||||||||||||||||| ||||||||||
Sbjct: 65 aaacgctcttatattagtttaaggagggagtac 97
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 81.8 bits (41), Expect = 1e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
||||||||||||||||||||||||||||| |||||| ||| | ||| |||||||| ||
Sbjct: 88 ctactccctccgtaaactaatataagagcatttagatcact-acttagtgatctaaatgc 30
Query: 65 tcttatattagtttacagagg 85
| |||||||||||||||||||
Sbjct: 29 ttttatattagtttacagagg 9
Score = 71.9 bits (36), Expect = 1e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 cctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctcttat 70
|||| |||||||||||||| ||| |||||| ||||| ||| |||||||| ||||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaag-tagtgatctaaatgctcttat 67
Query: 71 attagtttacagagggagta 90
|||||||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaa--aatagagatctaaacgctc 66
|||||| |||||||||||||||| | |||||| ||||| | ||| |||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 67 ttatattagtttacagagggagtac 91
|||||||||||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
Score = 69.9 bits (35), Expect = 6e-12
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaa--tagagatctaaacg 63
||||||||| |||||||||||||||| | |||||| |||| | ||| |||||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 64 ctcttatattagtttacagagggagtactt 93
||||||||||||||||||||||| |||||
Sbjct: 31 gtcttatattagtttacagagggaatactt 2
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||| |||||||||||||||||| |||||| ||| ||||||| |||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 66 cttatattagtttacagagggagtac 91
|||||||| |||| |||||||||||
Sbjct: 65 cttatatttctttatagagggagtac 90
Score = 56.0 bits (28), Expect = 8e-08
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||| ||||||||||| |||||| |||| ||| | ||||||||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 66 cttatattagtttacagagggagtactt 93
|||||||| ||||| ||||||||||||
Sbjct: 29 cttatatttctttaccgagggagtactt 2
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
||||| |||| ||||| |||||||||||||||||| ||| || ||| |||||||||||
Sbjct: 4 ctactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgc 63
Query: 65 tcttatattagtttacagaggg 86
||||||||| |||||||||||
Sbjct: 64 tcttatatttctttacagaggg 85
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 10 ccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctta 69
||||| ||||| |||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 70 tattagtttacagagggagta 90
|||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||| ||||| ||| |||||||||| || |||| |||||| ||| ||||||||||||
Sbjct: 89 tactcactccgcaaagaaatataagagtgtctagatcactaaagtagtgatctaaacgct 30
Query: 66 cttatattagtttacagag 84
|||||||| ||||||||||
Sbjct: 29 cttatatttgtttacagag 11
Score = 44.1 bits (22), Expect = 3e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 16 gtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctcttatatt 73
|||||| |||||||||||||||||| |||| ||| |||||| || ||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatt 72
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgc 64
|||||||||||||||| |||||||||| ||||||| |||| ||| |||||| ||||
Sbjct: 90 ctactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgc 31
Query: 65 tcttatattagtttacagagggagtac 91
||||||||| |||||||| |||||||
Sbjct: 30 tcttatatttctttacagaaggagtac 4
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
|||||| || ||||| ||||||||||||| |||| |||||| ||| |||||||| ||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 66 cttatattagtttacagagggagta 90
|||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 65.9 bits (33), Expect = 9e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 49 atagagatctaaacgctcttatattagtttacagagggagtactt 93
|||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 42 atagtgatctaaacgctcttatatttctttacagagggagtactt 86
Score = 60.0 bits (30), Expect = 5e-09
Identities = 71/85 (83%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||| |||||||||||||||||| |||| ||||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcactat------gatctaaacgct 30
Query: 66 cttatattagtttacagagggagta 90
|||||||| |||||||||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 61.9 bits (31), Expect = 1e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctcttatattag 75
|||||| |||||||||||||| ||| ||| || ||| || |||||||||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 76 tttacagagggagta 90
||||| |||||||||
Sbjct: 19 tttacggagggagta 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| ||||||||||||||||| |||| || ||||| ||||||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 64
Query: 66 cttatattagtttac 80
|||||||| ||||||
Sbjct: 65 cttatatttgtttac 79
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 5 ctactccctccgtaaactaatataagagcgt 35
|||||||||||||||||||||||||||||||
Sbjct: 63 ctactccctccgtaaactaatataagagcgt 33
Score = 56.0 bits (28), Expect = 8e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 63 gctcttatattagtttacagagggagta 90
||||||||||||||||||||||||||||
Sbjct: 32 gctcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 61 acgctcttatattagtttacagagggagta 90
|||||||||||||||||||| |||||||||
Sbjct: 33 acgctcttatattagtttacggagggagta 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagc 33
||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagc 32
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/86 (84%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| ||| |||| | |||||| |||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtaaataaatgtaagtg--tttagatcactaaagtagtgatctaaacact 62
Query: 66 cttatattagtttacagagggagtac 91
|||||||| ||||||||||||||||
Sbjct: 63 cttatatttctttacagagggagtac 88
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 54 gatctaaacgctcttatattagtttacagagggagta 90
||||||||||||||||||||| |||||| ||||||||
Sbjct: 56 gatctaaacgctcttatattattttacatagggagta 92
Score = 52.0 bits (26), Expect = 1e-06
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatacta---aaatagagatctaaac 62
|||||||| ||||| ||||||||||||||||||| |||| | ||| |||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 63 gctcttatattagtttacagagggagta 90
||||| ||||| || ||||||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||| ||| |||| | |||||||||| | | |||| |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 66 cttatattagtttacagagggagta 90
|||||||||||||| |||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 taaacgctcttatattagtttacagagggagtac 91
|||| ||| |||||||||||||||||||||||||
Sbjct: 37 taaatgcttttatattagtttacagagggagtac 4
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||| | ||||||||| ||||||| |||||| ||| ||||||| | |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 66 cttatattagtttacagagggagta 90
|||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 59 aaacgctcttatattagtttacagagggagta 90
|||| |||||||||||||||||||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 62 cgctcttatattagtttacagagggagtac 91
||||||||||||||||||| ||||||||||
Sbjct: 46 cgctcttatattagtttaccgagggagtac 75
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcg 34
||||||||| |||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagcg 46
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgttt 37
||||||||| ||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 54 gatctaaacgctcttatattagtttacagagggagta 90
|||||||||| ||||||||| |||||||||||||||
Sbjct: 41 gatctaaacgatcttatatttctttacagagggagta 5
>RF00906;MIR1122;AJ313099.1/1401-1309 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 65 tcttatattagtttacagagggagtacttt 94
||||||| |||||||||||||||||||||
Sbjct: 30 tcttataaaagtttacagagggagtacttt 1
