miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 147 bits (74), Expect = 3e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||| |||| | |||| |||| ||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 133 bits (67), Expect = 4e-31
Identities = 78/82 (95%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||| ||||||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 66 cttatattagtttacggaggga 87
||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggaggga 8
Score = 46.1 bits (23), Expect = 8e-05
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
|||||| |||||||||||||||||| |||| | |||| || | |||||| ||| ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 69 atattagtttacggagggagta 90
|||||||||||| ||||||||
Sbjct: 68 atattagtttacaaagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 133 bits (67), Expect = 4e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 66 cttatattagtttacggagggagtaa 91
||||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagtaa 90
Score = 101 bits (51), Expect = 2e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||| |||| || |||| |||||| |||||| |||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 66 cttatattagtttacggagggagtaa 91
||||||||||||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagtaa 4
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 131 bits (66), Expect = 2e-30
Identities = 80/85 (94%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||| | |||| ||||||| ||||||||||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacggagggagta 5
Score = 69.9 bits (35), Expect = 6e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||| ||| |||| | |||| |||| |||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 66 cttatattagtttacggagggagtaa 91
||||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttacagagggagtaa 90
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 127 bits (64), Expect = 3e-29
Identities = 81/87 (93%)
Strand = Plus / Minus
Query: 4 aatactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacg 63
|||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||||
Sbjct: 91 aatacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacg 32
Query: 64 ctcttatattagtttacggagggagta 90
|||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacggagggagta 5
Score = 75.8 bits (38), Expect = 9e-14
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||| |||| |||||| |||| |||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 123 bits (62), Expect = 4e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||| |||||||||||||||| |||||||| | ||||||||||||| ||||||||||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||||| |||| || |||| |||| ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| | |||||||
Sbjct: 65 tttatattagtttacagggggagta 89
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 2 ttaatactccctctgtaaactaatataagagcatttanatcactactttagtattctaaa 61
||||||||||||| |||||||||||||||||||||| | |||||||| |||| ||||||
Sbjct: 93 ttaatactccctccataaactaatataagagcatttagaacactacttcagtaatctaaa 34
Query: 62 cgctcttatattagtttacggagggagtaaaa 93
| |||||||||||||||||||||||||||||
Sbjct: 33 tgttcttatattagtttacggagggagtaaaa 2
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||| |||||| || ||| |||| ||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 119 bits (60), Expect = 7e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 4 aatactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacg 63
|||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||
Sbjct: 3 aatactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcg 62
Query: 64 ctcttatattagtttacggagggagta 90
||||||||||||||||| |||||||||
Sbjct: 63 ctcttatattagtttacagagggagta 89
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||||| ||| ||||||| |||| ||||| ||||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 119 bits (60), Expect = 7e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||||||||||||||||||||||||| | |||||||||||||| |||||| ||
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgc 63
Query: 65 tcttatattagtttacggagggagtaa 91
||||||||| ||||||||||||||||
Sbjct: 64 tcttatatttctttacggagggagtaa 90
Score = 75.8 bits (38), Expect = 9e-14
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||| |||||||||||||||| ||||||| |||| ||| || |||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 119 bits (60), Expect = 7e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 4 aatactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacg 63
|||||||||||||||||||||||||| |||||||| ||||||| |||| || |||||| |
Sbjct: 3 aatactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatg 62
Query: 64 ctcttatattagtttacggagggagta 90
|||||||||||||||| ||||||||||
Sbjct: 63 ctcttatattagtttatggagggagta 89
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||||||| || | || |||| |||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 109 bits (55), Expect = 6e-24
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||| | |||||| ||||||| ||||| ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 66 cttatattagtttacggagggagtaa 91
||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagtaa 4
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||||||||||||||| |||| || ||||||||||| |||||| | |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 107 bits (54), Expect = 3e-23
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||| ||| ||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 93.7 bits (47), Expect = 4e-19
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 4 aatactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacg 63
|||||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||
Sbjct: 3 aatactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacg 62
Query: 64 ctcttatattagtt 77
||||||||||||||
Sbjct: 63 ctcttatattagtt 76
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||| | |||| |||||||||||||| |||||| | |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 66 cttatattagtttacggaggga 87
||||||||||||||| ||||||
Sbjct: 29 cttatattagtttacagaggga 8
Score = 77.8 bits (39), Expect = 2e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
||||||||||||||||||||||| | |||| ||||||| |||| |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 69 atattagtttacggagggagta 90
|||||||||||| |||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||||||||||||||||||||| |||| || |||| ||||||| ||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||||||||||||||| |||| ||||||| |||| | | |||| |||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||| ||||| |||||||||| |||| ||||||| |||| |||||||||||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||| |||| | ||||| |||||| ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 66 cttatattagtttacggagggagta 90
|||||||| ||||| |||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 99.6 bits (50), Expect = 6e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||||||||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcactac-ttaatgatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||| | ||||||||
Sbjct: 29 tttatattagtttatgaagggagta 5
Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 56 tctaaacgctcttatattagtttacggagggagta 90
|||||| |||||||||||||||||| |||||||||
Sbjct: 54 tctaaatgctcttatattagtttacagagggagta 88
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 99.6 bits (50), Expect = 6e-21
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||| ||||||||||| ||||||||| |||| ||||||| ||||| ||||||||||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
||||||||| |||||||||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 93.7 bits (47), Expect = 4e-19
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||| ||||| |||||||||||| |||| || ||||||||||| |||||||||
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 65 tcttatattagtttacggagggagta 90
||||||| |||||||| || ||||||
Sbjct: 64 tcttatagtagtttacagacggagta 89
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagcatttanatcactactttagtattctaaacgctcttatattag 75
||||||||||||||||||||||| | ||||| ||||||| |||||| ||||||||||||
Sbjct: 79 gtaaactaatataagagcatttagaacactattttagtaatctaaatactcttatattag 20
Query: 76 tttacggagggagta 90
||||| |||||||||
Sbjct: 19 tttacagagggagta 5
Score = 93.7 bits (47), Expect = 4e-19
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||||||||||||||| ||||| || |||| |||| ||||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 66 cttatattagtttacggaggga 87
|||||||||||||||| |||||
Sbjct: 65 cttatattagtttacgaaggga 86
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||||||||||||||| |||| ||||||| ||||||| | |||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
Score = 77.8 bits (39), Expect = 2e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
||||||||||||||||||||||||| || |||| || |||| |||| ||||||| |
Sbjct: 90 atactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacac 31
Query: 65 tcttatattagtttacggagggagta 90
|||||||||||||||| |||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||| |||| |||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttaccgagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 69/85 (81%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||| ||||||||||| |||| | ||||| |||| |||||| |||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 66 cttatattagtttacggagggagta 90
|||||||| |||| |||||||||
Sbjct: 65 cttatatttctttatagagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 89.7 bits (45), Expect = 6e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||| ||||||||||| ||| ||||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 66 cttatattagtttacggagggagt 89
||||||||||||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
Score = 81.8 bits (41), Expect = 1e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctc 66
|||||||| |||||||||||||||||| |||| ||||||| |||| || |||| |||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 67 ttatattagtttacggagggagta 90
|||||||| |||||||||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 89.7 bits (45), Expect = 6e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||| |||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactac-ttagtgatctaaatgct 29
Query: 66 cttatattagtttacggagg 85
|||||||||||||| ||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 89.7 bits (45), Expect = 6e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 cctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctcttat 70
||||||||||||||||||| |||||||| ||||||| | ||| |||||| ||||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaagt-agtgatctaaatgctcttat 67
Query: 71 attagtttacggagggagta 90
||||||||||||||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 89.7 bits (45), Expect = 6e-18
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 11 cctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctcttat 70
|||| |||||||||||||||||| |||| ||||||| |||||| || ||||||||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 71 attagtttacggagggagta 90
|||| ||||| |||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 89.7 bits (45), Expect = 6e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| |||||||||||| ||| ||||||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 66 cttatattagtttacggagg 85
||||||||||||||||||||
Sbjct: 65 cttatattagtttacggagg 84
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 87.7 bits (44), Expect = 2e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 20 actaatataagagcatttanatcactactttagtattctaaacgctcttatattagttta 79
|||||||||||||| |||| ||||||| |||| | |||||| |||||||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 80 cggagggagta 90
|||||||||||
Sbjct: 124 cggagggagta 134
Score = 81.8 bits (41), Expect = 1e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||| ||||||||||||||||||||||| |||| || |||| |||||||||
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 65 tcttatattagt 76
||||||||||||
Sbjct: 75 tcttatattagt 64
Score = 60.0 bits (30), Expect = 5e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 57 ctaaacgctcttatattagtttacggagggagta 90
|||||||||||||||||||||||| |||||||||
Sbjct: 38 ctaaacgctcttatattagtttacagagggagta 5
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcattta 38
|||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgttta 37
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 85.7 bits (43), Expect = 9e-17
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||||||||||||||| |||| || |||| ||| |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatag--ttctaaacgct 62
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||||||||||||
Sbjct: 63 attatattagtttacggagggagta 87
Score = 77.8 bits (39), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||| ||| |||| | |||| |||||| ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 66 cttatattagtttacggagggagta 90
||||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 85.7 bits (43), Expect = 9e-17
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||| || |||| || |||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||||||||||||||
Sbjct: 63 cttatattagtttacggagggagta 87
Score = 77.8 bits (39), Expect = 2e-14
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||||||| |||| | |||| |||||| ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactact--ttagtattctaaacg 63
|||||||||||||||||||||||||| | |||| ||||||||| ||||| |||||| |
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 64 ctcttatattagtttacggaggga 87
|||||||||||||||| ||||||
Sbjct: 31 gtcttatattagtttacagaggga 8
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactt--tagtattctaaacgctc 66
||||||||||||||||||||||| | |||| ||||||| | |||| |||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 67 ttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 68 ttatattagtttacagagggagta 91
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 77.8 bits (39), Expect = 2e-14
Identities = 78/92 (84%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagt-------attct 58
|||||||||||||||||||||||||||| |||| ||||||| |||| | |||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaagtct 64
Query: 59 aaacgctcttatattagtttacggagggagta 90
||||||||||||||||||||| ||||||||||
Sbjct: 65 aaacgctcttatattagtttaaggagggagta 96
Score = 73.8 bits (37), Expect = 4e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 35 tttanatcactactttagtattctaaacgctcttatattagtttacggagggagta 90
|||| |||||||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 60 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagta 5
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 77.8 bits (39), Expect = 2e-14
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||| ||||||||||| ||||||||||| |||| |||||||||| ||| |||||||||
Sbjct: 90 atacaccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgc 31
Query: 65 tcttatattagtttacggagggagta 90
||||||||| ||||| |||| ||||
Sbjct: 30 tcttatatttctttacagaggtagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||| |||||||||| ||||||||||| |||| |||||| |||| ||||||||||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 66 cttatattagtttacggaggg 86
|||||||| ||||| |||||
Sbjct: 65 cttatatttctttacagaggg 85
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 9e-14
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| ||||||||| |||||| || ||||||||||| ||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 66 cttatattagtttacggagggagta 90
|||||||| | |||||||||||||
Sbjct: 29 cttatatttctgtacggagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 1e-12
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 12 ctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctcttata 71
|||||||||| ||||||||||| |||| |||||||||||||| |||| || ||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttata 70
Query: 72 ttagtttacggagggagta 90
|| ||| ||||| |||||
Sbjct: 71 tttctttgcggagtgagta 89
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 7 actccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctc 66
|||||||| ||||||||||||||||| |||| ||||| | |||| | ||| |||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 67 ttatattagtttac 80
||||||||||||||
Sbjct: 28 ttatattagtttac 15
Score = 67.9 bits (34), Expect = 2e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
||||| ||||||||||||||||||| || | |||| || | || ||||||| |||||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 69 atattagtttacggagggagt 89
|||||||||||||||||||||
Sbjct: 68 atattagtttacggagggagt 88
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||| |||||||| || |||| || | || |||| |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 66 cttatattagtttacggagggagtaa 91
|||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacggagggagtaa 90
Score = 67.9 bits (34), Expect = 2e-11
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| |||||||||||||| | ||||| | || || ||||||| | |||| |||
Sbjct: 89 tactccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgct 30
Query: 66 cttatattagtttacggagggagta 90
|||||||||||||| |||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
|||||| ||||| ||||||||||| |||| ||||||| ||||| ||||||||| |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 69 atattagtttacggagggagta 90
||||| |||||| |||||||||
Sbjct: 26 atatttgtttacagagggagta 5
Score = 61.9 bits (31), Expect = 1e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||| |||||||| || |||| ||| ||| |||| ||||||||||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 66 cttatattagtttacggaggga 87
|||||||| ||||| ||||||
Sbjct: 65 cttatatttctttactgaggga 86
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 67.9 bits (34), Expect = 2e-11
Identities = 75/88 (85%), Gaps = 7/88 (7%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagag-----catttana--tcactactttagtattct 58
||||||||||||||||||||||||||| |||||| | |||||| |||||| |||
Sbjct: 96 tactccctctgtaaactaatataagagcgtttcatttagatctcactattttagtgatct 37
Query: 59 aaacgctcttatattagtttacggaggg 86
||| |||||||||||||||||| |||||
Sbjct: 36 aaatgctcttatattagtttacagaggg 9
Score = 67.9 bits (34), Expect = 2e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 10 ccctctgtaaactaatataagagcatttanatcacta 46
||||||||||||||||||||||||||||| |||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcacta 45
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 65.9 bits (33), Expect = 9e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||| ||||| ||||||||||| |||| ||||||||| ||| ||| |||||
Sbjct: 4 atactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgc 63
Query: 65 tcttatattagtttac 80
||||||||| ||||||
Sbjct: 64 tcttatatttgtttac 79
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 57 ctaaacgctcttatattagtttacggagggagta 90
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctaaacgctcttatatttctttacggagggagta 5
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 3 taatactccctctgtaaactaatataagagca 34
||||||||||||||||||||||||||||||||
Sbjct: 2 taatactccctctgtaaactaatataagagca 33
Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 61 acgctcttatattagtttacggagggagta 90
||||||||||||||||||||||||||||||
Sbjct: 33 acgctcttatattagtttacggagggagta 62
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 63 gctcttatattagtttacggagggagta 90
|||||||||||||||||| |||||||||
Sbjct: 32 gctcttatattagtttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagc 33
||||||||| ||||||||||||||||||
Sbjct: 62 tactccctccgtaaactaatataagagc 35
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 61.9 bits (31), Expect = 1e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| |||||||||| |||| |||||||||||||| |||||| |
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaa--ca 30
Query: 66 cttatattagtttacggagggagta 90
|||| ||| |||||||||||||||
Sbjct: 29 cttacatttatttacggagggagta 5
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 60.0 bits (30), Expect = 5e-09
Identities = 76/91 (83%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 4 aatactccctctgtaaactaatataagagcatttanatcactactt---tagtattctaa 60
|||||||||||||| || ||||| ||||| |||| ||||||||| |||| |||||
Sbjct: 3 aatactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaa 62
Query: 61 acgctcttatattagtttacggagggagtaa 91
|||||||||||||| ||||| |||||||||
Sbjct: 63 acgctcttatattattttacatagggagtaa 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcacta 46
|||||||| |||||| |||||||||||| |||| |||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcacta 52
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 60.0 bits (30), Expect = 5e-09
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||| |||||||||| |||| || ||||||||||| |||| |||||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 66 cttatattagtttacggagggagta 90
|||||||| ||||| || ||||||
Sbjct: 29 cttatatttctttacagaaggagta 5
Score = 60.0 bits (30), Expect = 5e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||| |||||||| ||||||||||| | || ||||||| |||| ||||||| ||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 66 cttatattagtttacggagggagta 90
|||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 56.0 bits (28), Expect = 8e-08
Identities = 71/86 (82%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||||||||| ||||||||||| |||| |||| |||| |||||||||
Sbjct: 4 atactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgc 57
Query: 65 tcttatattagtttacggagggagta 90
||||||||| ||||| |||||||||
Sbjct: 58 tcttatatttctttacagagggagta 83
Score = 54.0 bits (27), Expect = 3e-07
Identities = 70/85 (82%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| ||||||||||| |||| ||||||| | ||||||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30
Query: 66 cttatattagtttacggagggagta 90
|||||||| ||||| |||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagag 32
|||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
Score = 50.1 bits (25), Expect = 5e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 59 aaacgctcttatattagtttacggagggagtaa 91
|||| ||||||||||||||||| ||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagtaa 4
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 cgctcttatattagtttacggagggagta 90
||||||||||||||||||| |||||||||
Sbjct: 46 cgctcttatattagtttaccgagggagta 74
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagc 33
||||||||| ||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagc 47
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 8 ctccctctgtaaactaatataagagcatttanatcacta 46
||||||||||||| ||||||||| |||||| |||||||
Sbjct: 76 ctccctctgtaaagaaatataagatcatttagatcacta 38
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 46.1 bits (23), Expect = 8e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 5 atactccctctgtaaactaatataagagcatttanatcacta 46
|||||||||||||||| ||||||||| | |||| |||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcacta 45
>RF00906;MIR1122;AK250375.1/999-905 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 ttaatactccctctgtaaactaatataaga 31
|||||||||||||||||| ||||||||||
Sbjct: 1 ttaatactccctctgtaacttaatataaga 30
