miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 4 agtactccgtctgtaaactaatataagagtgtttagatcactagtt 49
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtactccctctgtaaactaatataagagtgtttagatcactagtt 48
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 2 tagtactccctctgtaaactaatataagagtgtttagataacta 45
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttaga 40
||||||||| || |||||||||||||| || |||||||
Sbjct: 90 tagtactccctccgtaaactaatataatagcgtttaga 53
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 tagtactccctctgtaaactaatataagagcgtttagatcacta 45
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||| ||||||||||||| ||||
Sbjct: 45 tagtgatctaaacgctcttatattagtttac 15
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttaga 40
|||||| || ||||||||||||||||| |||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttaga 55
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| || |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcacta 45
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||||||||||||||| |||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcacta 45
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 56 tttagtgatctaaatgctcttatattagattac 88
|||||||||||||| ||||||||||||| ||||
Sbjct: 47 tttagtgatctaaacgctcttatattagtttac 15
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||||||||||||||| |||||||| |||||||||||||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcacta 49
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 91 tagtactccctctgtaaactaatataagagcatttagatcacta 48
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||||||||||||||||| ||||
Sbjct: 48 tagtgatctaaatgctcttatattagtttac 78
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 63.9 bits (32), Expect = 4e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 2 tagtactccctctgtaaactaatataaaagtgtttagataacta 45
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttaga 40
||||||||| || ||||||||||||||||| |||||||
Sbjct: 90 tagtactccctccgtaaactaatataagagcgtttaga 53
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 61.9 bits (31), Expect = 1e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 4 agtactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 3 agtactccctctgtaaactaatataagagcttttagatcacta 45
Score = 56.0 bits (28), Expect = 9e-08
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 17 taaactaatataagagtgtttagatcactagttgtctagtttagtgatctaaatgctctt 76
|||||||||||||||| ||||||| | ||| | ||| |||||||||||||| ||||||
Sbjct: 85 taaactaatataagagcgtttaga-ctttagatcactactttagtgatctaaaagctctt 27
Query: 77 atattagattac 88
||||||| ||||
Sbjct: 26 atattagtttac 15
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 4 gtactccctctataaaccaatataagagtgtttagatcacta 45
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| || ||||||||||||||||| ||||||| |||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacacta 49
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 69/83 (83%), Gaps = 8/83 (9%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcactagttgtctagtttagtgatc 65
|||||| || ||||||||||||||||| |||||||| |||| || ||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattt--------tagtgatc 38
Query: 66 taaatgctcttatattagattac 88
|||||||||||||||||| ||||
Sbjct: 37 taaatgctcttatattagtttac 15
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcacta 45
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 4 gtactccctctgtaaactaatataagagtatttagattacta 45
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattagattac 88
||||| |||||||||||||||||||| ||||
Sbjct: 49 tagtgttctaaatgctcttatattagtttac 79
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 88 gtactccctctgtaaagaaatataagagtgtttagatcacta 47
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||||||||||||||| | |||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcacta 45
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||||||||||||||| | |||||||||||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcacta 49
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| || |||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattacta 45
Score = 44.1 bits (22), Expect = 3e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 90 gtactccctctgtaaactaatataaaaacatttagatcacta 49
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 56 tttagtgatctaaatgctcttatattagattac 88
|||||||||||||||||||||||||||| ||||
Sbjct: 47 tttagtgatctaaatgctcttatattagtttac 15
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 tctgtaaactaatataagagtgtttagatcacta 46
|||||||||||||||||||| ||||||||||||
Sbjct: 12 tctgtaaactaatataagagcatttagatcacta 45
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 agtactccgtctgtaaactaatataagagtgttt 37
|||||||| |||||||||||||||||||| ||||
Sbjct: 98 agtactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| ||||||||||||||||||| |||||||||||||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcacta 49
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattacta 45
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 70/85 (82%), Gaps = 8/85 (9%)
Strand = Plus / Plus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcactagttgtctagtttagtgat 64
||||||| || ||||| |||||||||||||||| ||||| ||| |||||||||
Sbjct: 4 gtactccctccgtaaattaatataagagtgttttgatca--------ctattttagtgat 55
Query: 65 ctaaatgctcttatattagattact 89
||||| ||||||||||||| |||||
Sbjct: 56 ctaaacgctcttatattagtttact 80
Score = 56.0 bits (28), Expect = 9e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 7 actccgtctgtaaactaatataagagtgtttagatcacta 46
||||| || ||||||||||||||||| |||||||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcacta 49
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3 tagtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||||| || ||||||||||||||||| |||||| ||||||
Sbjct: 2 tagtactccctccgtaaactaatataagagcgtttaggtcacta 45
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||||||||||||||||| ||||
Sbjct: 49 tagtgatctaaatgctcttatattagtttac 79
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 13 tctgtaaactaatataagagtgtttagatcacta 46
|||||||||||||||||||| ||||||||||||
Sbjct: 82 tctgtaaactaatataagagcatttagatcacta 49
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgttt 37
|||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 4 agtactccgtctgtaaactaatataagagtgtttag 39
|||||||| |||||||||||||||||||| ||||||
Sbjct: 3 agtactccctctgtaaactaatataagagcgtttag 38
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 56 tttagtgatctaaatgctcttatattagattac 88
|||| ||||||||||||||||||||||| ||||
Sbjct: 92 tttaatgatctaaatgctcttatattagtttac 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 58 tagtgatctaaatgctcttatattag 83
|||||||||||| |||||||||||||
Sbjct: 90 tagtgatctaaacgctcttatattag 65
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatca 43
|||||| || ||||||||||||||||| |||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatca 97
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/76 (82%), Gaps = 8/76 (10%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcactagttgtctagtttagtgatc 65
|||||| |||||||||||||||||||| || ||||||||| || ||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactt--------tagtgatc 56
Query: 66 taaatgctcttatatt 81
||||||||||||||||
Sbjct: 57 taaatgctcttatatt 72
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 58 tagtgatctaaatgctcttatattagattac 88
||||||||| |||||||||||||||| ||||
Sbjct: 45 tagtgatctgaatgctcttatattagtttac 15
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||||||||||||||||| ||||
Sbjct: 47 tagtgatctaaatgctcttatattagtttac 77
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| || ||||||||||||||||| ||||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcacta 47
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 57 ttagtgatctaaatgctcttatattagattac 88
||||||||||||||||| ||||||||| ||||
Sbjct: 45 ttagtgatctaaatgcttttatattagtttac 14
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 4 agtactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||||| |||||||| |||||||||| |||||||||||||
Sbjct: 85 agtactccctctgtaaagaaatataagagcgtttagatcacta 43
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 16 gtaaactaatataagagtgtttagatcacta 46
||||||||||||||||| |||||||||||||
Sbjct: 79 gtaaactaatataagagcgtttagatcacta 49
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcacta 45
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||| ||||||||||||| ||||
Sbjct: 49 tagtgatctaaacgctcttatattagtttac 79
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcactag 47
|||||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactag 51
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 90 gtactccctctgtaaactaatataagaccttttagatcacta 49
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 4 agtactccgtctgtaaactaatataagagtgtttagatcacta 46
|||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 3 agtattccctctgtaaactaatataagaccttttagatcacta 45
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 7 actccgtctgtaaactaatataagagtgtttagatcac 44
||||| || ||||||||||||||||| |||||||||||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcac 51
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 5 gtactccgtctgtaaactaatataagagtgtttagatcacta 46
||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 92 gtactccctctgtaaactaatataagaccttttagatcacta 51
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 4 agtactccgtctgtaaactaatataagagtgtttagatcacta 46
|||| ||| ||||||||||||||||||| ||||||||||||
Sbjct: 3 agtattccctctgtaaactaatataagaccttttagatcacta 45
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 tctgtaaactaatataagagtgtttagatcacta 46
||||||||| |||||||||| |||||||||||||
Sbjct: 12 tctgtaaacaaatataagagcgtttagatcacta 45
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagagtgtttagatcacta 46
|||||| ||||||||||||||||| || ||||||||||||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcacta 45
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 58 tagtgatctaaatgctcttatattagattac 88
|||||||||||||||| ||||||||| ||||
Sbjct: 45 tagtgatctaaatgcttttatattagtttac 15
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tactccgtctgtaaactaatataagag 32
|||||| ||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagag 31
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 tagtgatctaaatgctcttatattag 83
||||| ||||||||||||||||||||
Sbjct: 49 tagtgttctaaatgctcttatattag 74
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 13 tctgtaaactaatataagagtgtttagatcacta 46
|||||||| |||||||||| |||||||||||||
Sbjct: 82 tctgtaaagaaatataagagcgtttagatcacta 49
