miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||||||| ||||||||| ||||||||||||| | ||
Sbjct: 86 tccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacactctt 27
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 26 atattagtttacggagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||||| ||||| |||| ||||||||| |||||||| | ||
Sbjct: 86 tccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacactctt 27
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 26 atattagtttacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagta 110
|||||||||||| |||||||||||| ||||| |||||||||
Sbjct: 49 tagtgatctaaatgtttttatattagtttacagagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||||||| |||| |||| |||| ||||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgctctt 67
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 68 atattagtttacggagggagta 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||| ||| || | || |||||||||||| | | ||
Sbjct: 86 tccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgctctt 27
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 91.7 bits (46), Expect = 2e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 31 cctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttat 90
||||||||||||||||||||||||||| |||| ||| ||||||||||||| | | ||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaa-gtagtgatctaaatgctcttat 67
Query: 91 attactttacggagggagta 110
|||| |||||||||||||||
Sbjct: 68 attagtttacggagggagta 87
Score = 54.0 bits (27), Expect = 5e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||||||| |||| | | |||||||||||| | ||||
Sbjct: 84 tccctccgtaaactaatataagagcatttagatcact-acttagtgatctaaatgctttt 26
Query: 89 atattactttacggagg 105
|||||| ||||| ||||
Sbjct: 25 atattagtttacagagg 9
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 87.7 bits (44), Expect = 4e-17
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 25 gtattccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgt 84
||||||||||||||||||||||||| | | ||| |||| ||||||||||||||||| |
Sbjct: 4 gtattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaagg 63
Query: 85 ttttatattactttacggagggagta 110
| |||||||| ||||| |||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
Score = 50.1 bits (25), Expect = 8e-06
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| | | ||| |||| || |||||||||||| | | ||
Sbjct: 86 tccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtctt 27
Query: 89 atattactttacggaggga 107
|||||| ||||| ||||||
Sbjct: 26 atattagtttacagaggga 8
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 37 taaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatattact 96
||||||||||||| ||||||| || |||||| |||||||||||| | |||||||||| |
Sbjct: 78 taaactaatataagagcatttagattattaaaatagtgatctaaatgcttttatattagt 19
Query: 97 ttacggagggagtattg 113
|||| ||||||||||||
Sbjct: 18 ttacagagggagtattg 2
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||||||||||| |||| || || | ||||||| | | ||
Sbjct: 8 tccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgctctt 67
Query: 89 atattactttacggagggagta 110
|||||| |||| ||||||||||
Sbjct: 68 atattagtttatggagggagta 89
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||| || |||| |||||||||||||||| || | ||
Sbjct: 86 tccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgctctt 27
Query: 89 atattactttacggagggagtatt 112
|||||| ||||| |||||||||||
Sbjct: 26 atattagtttacagagggagtatt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||| || |||| || ||||||||||| || | ||
Sbjct: 8 tccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgctctt 67
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 68 atattagtttacagagggagta 89
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 33 tctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatat 92
||||||||||| ||||| ||| ||| |||| ||||||||| ||||||||| | ||||||
Sbjct: 82 tctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgctcttatat 23
Query: 93 tactttacggagggagtat 111
|| ||||||||||||||||
Sbjct: 22 taatttacggagggagtat 4
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 79.8 bits (40), Expect = 9e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||||||| ||| | | |||| |||||||||||||||| ||
Sbjct: 8 tccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgttctt 67
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 68 atattagtttacagagggagta 89
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| | | ||| |||| || |||| |||||||| ||||
Sbjct: 86 tccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgctttt 27
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 26 atattagtttacggagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 79.8 bits (40), Expect = 9e-15
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgctctt 67
Query: 89 atatta 94
||||||
Sbjct: 68 atatta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 39 aactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatattacttt 98
||||||||||| ||| ||| |||| || |||||||||||||| | |||||||| |||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 99 acggagggagtatt 112
|| |||||||||||
Sbjct: 16 acagagggagtatt 3
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 79.8 bits (40), Expect = 9e-15
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||||||| ||||||||| |||||||||||||| | ||
Sbjct: 131 tccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgctctt 72
Query: 89 atatta 94
||||||
Sbjct: 71 atatta 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 tgatctaaacgtttttatattactttacggagggagtat 111
||||||||| | | |||||||| ||||||||||||||||
Sbjct: 97 tgatctaaatgctcttatattagtttacggagggagtat 135
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||||||||| |||||||| ||| ||| |||| |||| |||||||||||||| | ||
Sbjct: 8 tccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgctctt 67
Query: 89 atattactttacggagg 105
|||||| ||||||||||
Sbjct: 68 atattagtttacggagg 84
Score = 52.0 bits (26), Expect = 2e-06
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 31 cctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttat 90
|||| |||||||||||||| ||| ||| |||| || |||||||| ||||| | ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 91 attactttacggagggagta 110
|||| ||||| |||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 31 cctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttat 90
||||||||||||||||||| ||||||| |||| || |||||| ||||||| | ||||
Sbjct: 84 cctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgctcttat 25
Query: 91 attactttacggagggagta 110
|||| |||||||||||||||
Sbjct: 24 attagtttacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||| ||| ||| |||| |||||||||||| | | ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgctctt 67
Query: 89 atattactttacggagggagtattg 113
|||||| ||||| |||| |||||||
Sbjct: 68 atattagtttacagaggaagtattg 92
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 26 tattccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtt 85
|||||||| ||||||||||||||| ||| || ||||||||| | ||||||||||| |
Sbjct: 5 tattccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactct 64
Query: 86 tttatattactttacggagggagt 109
|||||||| ||||||||||||||
Sbjct: 65 cttatattagtttacggagggagt 88
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 73.8 bits (37), Expect = 5e-13
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||| ||||||||||||||||||||||| ||||||| |||| |||||||| | ||
Sbjct: 86 tccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgctctt 27
Query: 89 atattactttacggaggga 107
|||||| ||||||||||||
Sbjct: 26 atattagtttacggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 26 tattccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtt 85
||||||||| |||||||||||||| ||| ||| | | ||||||| ||||||||| | |
Sbjct: 5 tattccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgct 64
Query: 86 tttatattactttacggagggagta 110
||||||||| ||||| ||||||||
Sbjct: 65 tttatattagtttacaaagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||| ||| |||| |||| |||||||| |||| | ||
Sbjct: 86 tccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactctt 27
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 26 atattaatttacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagt 109
|||||||||||||| | |||||||| ||||| ||||||||
Sbjct: 49 tagtgatctaaacgctcttatattagtttactgagggagt 88
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| |||||| |||| || |||||||||||| | | ||
Sbjct: 8 tccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgctctt 67
Query: 89 atattactttacggagggagta 110
||||| ||||||||||||||||
Sbjct: 68 atatttctttacggagggagta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| ||||| ||||||| ||||||| |||| |||||||||||||| || | | ||
Sbjct: 86 tccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgctctt 27
Query: 89 atattactttacggagggagtat 111
|||||| ||||| ||||||||||
Sbjct: 26 atattagtttacagagggagtat 4
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||||||||||||||||||||| ||| || | |||| ||||||||||||| | ||
Sbjct: 86 tccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacactctt 27
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||||||||||| || | |||| || || | |||| ||||
Sbjct: 8 tccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataatttt 67
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 68 atattagtttacggagggagta 89
Score = 48.1 bits (24), Expect = 3e-05
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||||| |||| | ||||| |||| || |||| | ||||
Sbjct: 86 tccctccgtaaactaatataaaattatttaaaacattattttagtaatttaaatgctttt 27
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||| ||| || | |||||||||| |||||| | ||||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgctttt 67
Query: 89 atattactttacggagggagta 110
|||||| ||||| | |||||||
Sbjct: 68 atattagtttacagggggagta 89
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||| |||||||||||||||||||||||| | || || |||| ||||||||| | ||
Sbjct: 86 tccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgctctt 27
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 26 atattagtttacagagggagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 71.9 bits (36), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 37 taaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatattact 96
||||||||||||||||| ||| |||||||| ||||||||||||| | | |||||||| |
Sbjct: 16 taaactaatataaaagcgtttagatcattaa-gtagtgatctaaatgctcttatattagt 74
Query: 97 ttacggagggagta 110
|||| |||||||||
Sbjct: 75 ttacagagggagta 88
Score = 63.9 bits (32), Expect = 5e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||||||| |||| | | || ||||||||||| ||||
Sbjct: 85 tccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgctttt 27
Query: 89 atattactttacggagggagta 110
|||||| |||| | ||||||||
Sbjct: 26 atattagtttatgaagggagta 5
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 69.9 bits (35), Expect = 8e-12
Identities = 75/88 (85%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 25 gtattccctctgtaaactaatataaaagcatttnnatcattaa--agtagtgatctaaac 82
||||||||||||||||||||||||| | | ||| |||| ||| ||||||||||||||
Sbjct: 4 gtattccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaa 63
Query: 83 gtttttatattactttacggagggagta 110
| | |||||||| ||||| |||||||||
Sbjct: 64 ggtcttatattagtttacagagggagta 91
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 69.9 bits (35), Expect = 8e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaa 81
||||||||||||||||||||| ||| ||| |||| |||||||||||||||||
Sbjct: 8 tccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||||||||||||||||||||| ||| || | |||| |||| |||||||| | ||
Sbjct: 8 tccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgctctt 65
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 66 atattagtttacggagggagta 87
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||| ||||| ||||||| || ||| |||| |||| ||||| |||||||| | ||
Sbjct: 8 tccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgctctt 67
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 68 atattagtttacggagggagta 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| ||| ||| | | |||| |||||||||||||| | ||
Sbjct: 86 tccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgctctt 27
Query: 89 atattactttacggagggagta 110
|||||| ||||| |||||||||
Sbjct: 26 atattagtttacagagggagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| ||| ||| |||| || |||| |||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgctctt 67
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 68 atattagtttacggagggagta 89
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 31 cctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttat 90
|||||||||| ||||||| ||| ||| |||| | ||||||||||||||||| | ||||
Sbjct: 10 cctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttat 69
Query: 91 attactttacggagggagtat 111
||| |||||| ||||| ||||
Sbjct: 70 atttctttacagagggtgtat 90
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 36 gtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatattac 95
|||||| ||||||| ||| || |||| | ||||||||| ||||||| | ||||||| |
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 96 tttacggagggagtat 111
||||||||||||||||
Sbjct: 19 tttacggagggagtat 4
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 60.0 bits (30), Expect = 8e-09
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
|||||| |||||||||||||| | ||||| || | | |||||||| |||||| | | ||
Sbjct: 8 tccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgctctt 67
Query: 89 atattactttacggagggagtatt 112
|||||| |||| ||||||||||||
Sbjct: 68 atattagtttatggagggagtatt 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 75 atctaaacgtttttatattactttacggagggagta 110
||||||| ||| |||||||| |||||||||||||||
Sbjct: 40 atctaaatgttcttatattagtttacggagggagta 5
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| || ||| || | |||| |||| |||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgctatt 65
Query: 89 atattactttacggagggagta 110
|||||| |||||||||||||||
Sbjct: 66 atattagtttacggagggagta 87
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||||||||||| || |||| || | |||| ||||| |||||| | | ||
Sbjct: 8 tccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgctctt 67
Query: 89 atattactttacggaggga 107
|||||| |||||| |||||
Sbjct: 68 atattagtttacgaaggga 86
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
||||||||||||| ||||||| || ||| ||| |||| |||||||||||||| | ||
Sbjct: 8 tccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgctctt 67
Query: 89 atattactttacggaggga 107
||||| |||||| ||||||
Sbjct: 68 atatttctttactgaggga 86
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 30 ccctctgtaaactaatataaaagcatttnnatcattaaagtagtga 75
|||||||||||||||||||| ||||||| |||| |||| ||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaatagtga 54
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 68 agtagtgatctaaacgtttttatattactttacgga 103
|||||||||||||||||| ||||||| |||||||||
Sbjct: 47 agtagtgatctaaacgttcttatatttctttacgga 12
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 33 tctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtttttatat 92
|||||||| ||||||| ||| | | |||| ||||||||| |||||||| | ||||||
Sbjct: 12 tctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacactcttatat 71
Query: 93 tactttacggagggagta 110
| ||||||||||||||||
Sbjct: 72 ttctttacggagggagta 89
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 60 atcattaaagtagtgatctaaacgtttttatattactttacggagggagta 110
|||| |||||||||||||||||| | ||||||| |||||| |||||||||
Sbjct: 37 atcactaaagtagtgatctaaacactcttatatttctttacagagggagta 87
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagtat 111
|||||||||||||| | ||||||| |||||| ||||||||||
Sbjct: 45 tagtgatctaaacgatcttatatttctttacagagggagtat 4
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagta 110
||||||||||||| || ||||||| || |||||||||||||
Sbjct: 45 tagtgatctaaacattcttatatttctgtacggagggagta 5
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagta 110
|||||||||||||| | ||||||| |||||| |||||||||
Sbjct: 43 tagtgatctaaacgctcttatatttctttacagagggagta 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 73 tgatctaaacgtttttatattactttacggagggagtat 111
||||||||||| | ||||||| |||||| ||||||||||
Sbjct: 42 tgatctaaacgctcttatatttctttacagagggagtat 4
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 60 atcattaaagtagtgatctaaacgtttttatatt 93
|||| ||||||||||||||||||| | |||||||
Sbjct: 55 atcactaaagtagtgatctaaacgctcttatatt 22
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataaaagca 54
||||||||||||||||||||| ||||
Sbjct: 8 tccctctgtaaactaatataagagca 33
