miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| || |||| || | ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 14 tatactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaaca 73
|||||||||||||||||||||||||| || |||| || |||||| || | |||||||||
Sbjct: 91 tatactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaaca 32
Query: 74 cttttatattantttacanagggagtacttg 104
|| |||||||| |||||| ||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtacttg 1
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || ||||| ||||||| || |||| |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 tttatattantttacanagggagta 100
||||||||| |||||| ||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacactt 76
|||||||| |||||||||||||| |||||||| |||||||||||| | ||| |||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattantttacanagggagtac 101
|||||||| ||||| |||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | | |||| ||||||||| || |||||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| || ||||| || |||| || | ||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 tttatattantttacanagggagtac 101
||||||||| |||||| |||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 93.7 bits (47), Expect = 5e-19
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| |||||||| ||||||||| || | |||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgc 63
Query: 75 ttttatattantttacanagggagtact 102
| |||||||| || ||| ||||||||||
Sbjct: 64 tcttatattagttcaca-agggagtact 90
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||| ||| ||||||||||| |||||||| ||||||| || | |||||||| ||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 93.7 bits (47), Expect = 5e-19
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| | ||||||||| | |||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 tttatattantttacanagggagtact 102
|||||||| |||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
Score = 81.8 bits (41), Expect = 2e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| |||||||| ||||||| || || ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacactttt 78
|||||| |||||||||||||| |||||||| | |||||| |||| ||||||| |||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattantttacanagggagtacttg 104
|||||| |||||| ||||||||||||
Sbjct: 68 atattagtttacaaagggagtacttg 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||| ||||||||||||||| ||| |||| |||| || || || ||||||| ||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 tttatattantttac 90
|||||||| |||||
Sbjct: 29 cttatattagtttac 15
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| |||| ||| ||||||||| || | |||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| |||| ||| ||||||| || | |||||| | |
Sbjct: 4 atactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgc 63
Query: 75 ttttatattantttacanagggagta 100
| |||||||| |||||| ||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||| |||| |||| ||||||| | |||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| || ||||| ||||||| |||| || |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||| ||||||||||| ||||| |||||||| ||||||||| || |||||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| |||||||| || |||||| || | |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 tttatattantttacanagggagtactt 103
||||||||| |||||| ||||||||||
Sbjct: 65 tttatattagtttacagggggagtactt 92
Score = 73.8 bits (37), Expect = 4e-13
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||| |||||||||||||||| ||| |||| | ||||| || |||||||||| ||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | |||||| ||||||| || || ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 tttatattantttacanagggagtac 101
||||||||| ||||| |||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
Score = 81.8 bits (41), Expect = 2e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| | ||||||||| | |||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||||||||| |||||||| ||||||| |||||||||||| | |||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 tttatattantttac 90
|||||||| |||||
Sbjct: 65 cttatattagtttac 79
Score = 63.9 bits (32), Expect = 4e-10
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 21 cctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacacttttat 80
|||| |||||||||||||| |||||||| ||||||| || | ||| |||| || ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attantttacanagggagta 100
|||| |||||| ||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| ||||||||||| | ||||||| ||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 tttatattantttacanagggagta 100
|||||||| |||||| ||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
Score = 63.9 bits (32), Expect = 4e-10
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacac 74
||||| ||||||||||||||||||| ||| |||| ||||||| || | | |||||| |
Sbjct: 90 atacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgc 31
Query: 75 ttttatattantttacanagggagtact 102
| |||||||| ||||| ||||||||||
Sbjct: 30 tcttatattagtttacggagggagtact 3
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| |||| || ||||||||||| | |||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 tttatattantttacanagggagta 100
||||||||| ||||| ||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 74 cttttatattantttacanagggagtac 101
||||||||||| |||||| |||||||||
Sbjct: 31 cttttatattagtttacagagggagtac 4
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 79.8 bits (40), Expect = 7e-15
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || ||||| || ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 tttatattantttacanagggagtact 102
|||||||| ||||| ||||||||||
Sbjct: 63 attatattagtttacggagggagtact 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| | |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattantttacanagggagtact 102
|||||||| |||||| ||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 79.8 bits (40), Expect = 7e-15
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| | |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattantttacanagggagtact 102
||||||||| |||||| ||||||||||
Sbjct: 29 tttatattagtttacagagggagtact 3
Score = 79.8 bits (40), Expect = 7e-15
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || ||||| || ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 tttatattantttacanagggagtact 102
|||||||| ||||| ||||||||||
Sbjct: 63 cttatattagtttacggagggagtact 89
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| |
Sbjct: 4 atactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgc 63
Query: 75 ttttatattantttacanagggagtac 101
| |||||||| |||| |||||||||
Sbjct: 64 tcttatattagtttatggagggagtac 90
Score = 73.8 bits (37), Expect = 4e-13
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| ||||||||||||| ||| |||| || | ||||||| | ||||||| ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 76 tttatattantttacanagggagta 100
||||||||| |||||| ||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 73.8 bits (37), Expect = 4e-13
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||| ||||| ||||||| || ||||| |||||||||||| | ||||||| ||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 tttatattantttacanagggagta 100
|||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||| | ||||| || | |||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 tttatattantttacanagggagtac 101
||||||| |||| | |||||||||
Sbjct: 29 cttatattggtttatagagggagtac 4
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 73.8 bits (37), Expect = 4e-13
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| |||| |||||| | |||| |||||||| ||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgct 30
Query: 76 tttatattanttta 89
||||||||| ||||
Sbjct: 29 tttatattagttta 16
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 27 taaactaatataanagcgtttanatcactaaaataataatctaaacacttttatattant 86
||||||||||||| |||||||| |||| | || || | ||||||| || |||||||| |
Sbjct: 16 taaactaatataaaagcgtttagatca-ttaagtagtgatctaaatgctcttatattagt 74
Query: 87 ttacanagggagtact 102
||||| ||||||||||
Sbjct: 75 ttacagagggagtact 90
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 71.9 bits (36), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacac 74
|||||||||| |||||||||||||| ||| |||| |||| ||||||| | |||||||| |
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 75 ttttatatta 84
| ||||||||
Sbjct: 75 tcttatatta 66
Score = 60.0 bits (30), Expect = 7e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgttta 48
|||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgttta 37
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 44 gtttanatcactaaaataataatctaaacacttttatattantttacanagggagtactt 103
||||| |||| |||||| || | |||||| || |||||||| |||||| |||||||||||
Sbjct: 61 gtttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagtactt 2
Query: 104 g 104
|
Sbjct: 1 g 1
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacactttt 78
||||||||||||||||||||| | | |||| ||||||||| || | ||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattantttacanagggagtac 101
|||||| |||||| |||||||||
Sbjct: 68 atattagtttacagagggagtac 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | | |||| ||||||| || | ||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 tttatattantttacanagggagtactt 103
|||||||| |||||| ||||| |||||
Sbjct: 29 cttatattagtttacagagggaatactt 2
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||| ||||||| ||||||| ||| |||||||| | |||||||| ||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 76 tttatattantttacanagggagtact 102
||||||| ||||| ||||| ||||
Sbjct: 65 cttatatttctttactgagggactact 91
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaa 71
|||||||||||||||||||||||| ||| |||| ||||||||| || | |||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 44.1 bits (22), Expect = 4e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgttta 48
||||||||| ||||||||||||| ||||||||
Sbjct: 96 tactccctccttaaactaatataagagcgttta 64
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacactttt 78
||||| ||||||||||||||| |||||| | |||| |||||| | |||||||| || ||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 79 atattantttacanagggagt 99
|||||| ||||| |||||||
Sbjct: 68 atattagtttacggagggagt 88
Score = 58.0 bits (29), Expect = 3e-08
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacactt 76
|||||||| |||||||||||||| || ||||| ||||| | |||| |||| ||| ||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattantttacanaggga 97
|||||||| |||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 13 ttatactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaac 72
||||| ||||| |||||||||||||| ||| |||| | ||||| || |||||||||
Sbjct: 92 ttatattcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaat 33
Query: 73 acttttatattantttacanagggagtac 101
||| |||||||| |||||| |||||||||
Sbjct: 32 actcttatattagtttacagagggagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || |||| || ||||||||| | |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 tttatattantttac 90
|||||||| |||||
Sbjct: 65 cttatattagtttac 79
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
|||||| |||||||| ||||||| ||||| || ||||||||| || | |||||||||||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 76 tttatattantttacanagggagta 100
||||||| ||||| ||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 63.9 bits (32), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 20 ccctctgtaaactaatataanagcgtttanatcactaaaata 61
|||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaata 50
Score = 58.0 bits (29), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgttt 47
|||||||||||||||||||||||| |||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcactaaaata 61
|||||||||||||||| ||||||| | |||||| ||||||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcactaaaata 50
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 44 gtttanatcactaaaataataatctaaacacttttatattantttacanagggagtac 101
||||| ||||||||| || | ||||||||||| ||||||| |||||| |||||||||
Sbjct: 31 gtttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagtac 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcacta 56
||||||||||||||| ||||||| || ||||| |||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcacta 47
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttanatcacta 56
||||||||||||||||||||||||| ||| || | |||||||
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcacta 45
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||| |||| ||||||| || | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactact-tagtgatctaaatgct 29
Query: 76 tttatattantttacanagg 95
||||||||| |||||| |||
Sbjct: 28 tttatattagtttacagagg 9
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 cctctgtaaactaatataanagcgtttanatcactaaaataataatctaaacacttttat 80
||||||||||||||||||| ||| |||| |||||| || || | ||||||| || ||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcact-aagtagtgatctaaatgctcttat 67
Query: 81 attantttacanagggagta 100
|||| ||||| ||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 74/91 (81%), Gaps = 6/91 (6%)
Strand = Plus / Plus
Query: 14 tatactccctctgtaaactaatataanagcgtttanatcactaaaataataatctaaaca 73
||||||||||||||||| ||||||| |||||||| ||| ||| | ||||||||
Sbjct: 3 tatactccctctgtaaagaaatataagagcgtttagatc------atagtgatctaaacg 56
Query: 74 cttttatattantttacanagggagtacttg 104
|| ||||||| |||||| ||||||||||||
Sbjct: 57 ctcttatatttctttacagagggagtacttg 87
Score = 54.0 bits (27), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcacta 56
||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta 43
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 54.0 bits (27), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttanatcacta 56
|||||||||||||||||||||||| | | |||| |||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcacta 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttanatcactaa--aataataatctaaacactt 76
||||||||||||||||||||| | | |||| |||||||| | || | ||||||| |
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattantttacanagggagtac 101
|||||||| |||||| |||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagc 43
||||||||||||||||||||||||| |||
Sbjct: 4 atactccctctgtaaactaatataagagc 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgt 45
||||||||| |||||||||||||| |||||
Sbjct: 62 tactccctccgtaaactaatataagagcgt 33
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 13 ttatactccctctgtaaactaatataanagcgtttanatcacta 56
|||||| ||||||||||| ||||||| |||||||| |||||||
Sbjct: 92 ttatacaccctctgtaaagaaatataagagcgtttagatcacta 49
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgttt 47
|||||||||||||||||||||||| || ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcg 44
||||||||| |||||||||||||| ||||
Sbjct: 74 tactccctcggtaaactaatataagagcg 46
