miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 123 bits (62), Expect = 5e-28
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 83.8 bits (42), Expect = 4e-16
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||||||||||| |||| || | ||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 115 bits (58), Expect = 1e-25
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | | |||||||||||||| || |||||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| || |||||||| |||| || | ||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 tttatattagtttacagagggagtac 101
||||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 14 tatactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaaca 73
|||||||||||||||||||||||||| || |||| || |||||| || | |||||||||
Sbjct: 91 tatactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaaca 32
Query: 74 cttttatattagtttacagagggagtacttg 104
|| ||||||||||||||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtacttg 1
Score = 107 bits (54), Expect = 3e-23
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || ||||||||||||| || |||| |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||||| ||||||||| | |||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 76 tttatattagtttacagagggagtact 102
||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
Score = 99.6 bits (50), Expect = 7e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| |||||||||||||||| || || ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactt 76
|||||||| |||||||||||||| ||||||||||||||||||||| | ||| |||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattagtttacagagggagtac 101
|||||||| ||||| ||||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| ||||| |||||||| || |||| |||||||| || | |||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 tttatattagtttacagagggagt 99
|||||||||||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| |||| ||||||||||||| || | |||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 93.7 bits (47), Expect = 5e-19
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| |||| ||||||||||| || | |||||| | |
Sbjct: 4 atactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgc 63
Query: 75 ttttatattagtttacagagggagta 100
| ||||||||||||||||||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 105 bits (53), Expect = 1e-22
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||||||||||| |||||| || | |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 76 tttatattagtttacagagggagtactt 103
||||||||||||||||| ||||||||||
Sbjct: 65 tttatattagtttacagggggagtactt 92
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||| |||||||||||||||| ||| |||||| ||||| || |||||||||| ||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 105 bits (53), Expect = 1e-22
Identities = 80/88 (90%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| |||||||||||||||||| || | |||||||| |
Sbjct: 4 atactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgc 63
Query: 75 ttttatattagtttacagagggagtact 102
| ||||||||||| ||| ||||||||||
Sbjct: 64 tcttatattagttcaca-agggagtact 90
Score = 83.8 bits (42), Expect = 4e-16
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||| ||| ||||||||||| |||||||||||||||| || | |||||||| ||
Sbjct: 88 tactccct-tgtgaactaatataagagcgtttagatcactactttagtgatctaaacgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
|||||| |||||||||||||| |||||||||| |||||| |||| ||||||| |||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattagtttacagagggagtacttg 104
||||||||||||| ||||||||||||
Sbjct: 68 atattagtttacaaagggagtacttg 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||| ||||||||||||||| ||| ||||||||| || || || ||||||| ||
Sbjct: 89 tactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgct 30
Query: 76 tttatattagtttacagaggga 97
|||||||||||||| ||||||
Sbjct: 29 cttatattagtttacggaggga 8
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | |||||||||||||| || || ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 tttatattagtttacagagggagtac 101
||||||||||||||| ||||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
Score = 99.6 bits (50), Expect = 7e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||||| ||||||||| | |||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 99.6 bits (50), Expect = 7e-21
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||| |||| |||| ||||||| | |||||||||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 75.8 bits (38), Expect = 1e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| || ||||||||||||| |||| || |||| ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 99.6 bits (50), Expect = 7e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||||||||| ||||||||||| | ||||||| ||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
||||| ||||||||||||||||||| ||| |||||||||||| || | | |||||| |
Sbjct: 90 atacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgc 31
Query: 75 ttttatattagtttacagagggagtact 102
| |||||||||||||| |||||||||||
Sbjct: 30 tcttatattagtttacggagggagtact 3
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 99.6 bits (50), Expect = 7e-21
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||| ||||||||||| ||||| |||||||||||||||||| || |||||||||| ||
Sbjct: 89 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 30
Query: 76 tttatattagtttacagagggagta 100
|||||||| ||||| |||||||||
Sbjct: 29 cttatattaatttacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
|||||||||| ||||| |||||||| ||||||||||| |||| || | |||||||| |
Sbjct: 4 atactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgc 63
Query: 75 ttttatattagtttacagagggagta 100
| ||||| ||||||||||| ||||||
Sbjct: 64 tcttatagtagtttacagacggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 97.6 bits (49), Expect = 3e-20
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || |||||||| ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 tttatattagtttacagagggagtact 102
|||||||||||||| |||||||||||
Sbjct: 63 attatattagtttacggagggagtact 89
Score = 89.7 bits (45), Expect = 7e-18
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||||| |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattagtttacagagggagtact 102
||||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||||||||| |||||||| ||||||| ||||||||||||| | |||||||| ||
Sbjct: 5 tactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgct 64
Query: 76 tttatattagtttacagagg 95
|||||||||||||| ||||
Sbjct: 65 cttatattagtttacggagg 84
Score = 73.8 bits (37), Expect = 4e-13
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 21 cctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacacttttat 80
|||| |||||||||||||| |||||||||||||||| || | ||| |||| || ||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attagtttacagagggagta 100
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 97.6 bits (49), Expect = 3e-20
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||||| |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 tttatattagtttacagagggagtact 102
|||||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtact 3
Score = 97.6 bits (49), Expect = 3e-20
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || |||||||| ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaatagt--tctaaacgct 62
Query: 76 tttatattagtttacagagggagtact 102
|||||||||||||| |||||||||||
Sbjct: 63 cttatattagtttacggagggagtact 89
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| |
Sbjct: 4 atactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgc 63
Query: 75 ttttatattagtttacagagggagtac 101
| ||||||||||||| ||||||||||
Sbjct: 64 tcttatattagtttatggagggagtac 90
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| ||||||||||||| ||| ||||||| | ||||||| | ||||||| ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||| ||||| ||||||| || |||||||||||||||||| | ||||||| ||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 tttatattagtttacagagggagta 100
|||||||||||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 85.7 bits (43), Expect = 1e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| |||||||||| ||||| || | |||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 76 tttatattagtttacagagggagtac 101
||||||| ||||| |||||||||||
Sbjct: 29 cttatattggtttatagagggagtac 4
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| |||| || ||||||||||| | |||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||| |||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 74 cttttatattagtttacagagggagtac 101
||||||||||||||||||||||||||||
Sbjct: 31 cttttatattagtttacagagggagtac 4
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 87.7 bits (44), Expect = 3e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
||||||||||||||||||||| | | |||||||||||||| || | ||||||| | ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattagtttacagagggagtac 101
|||||||||||||||||||||||
Sbjct: 68 atattagtttacagagggagtac 90
Score = 73.8 bits (37), Expect = 4e-13
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| | | |||||||||||| || | ||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 tttatattagtttacagagggagtactt 103
||||||||||||||||||||| |||||
Sbjct: 29 cttatattagtttacagagggaatactt 2
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| ||| ||||||||||| | |||| |||||||| ||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgct 30
Query: 76 tttatattagttta 89
||||||||||||||
Sbjct: 29 tttatattagttta 16
Score = 73.8 bits (37), Expect = 4e-13
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 27 taaactaatataanagcgtttagatcactaaaataataatctaaacacttttatattagt 86
||||||||||||| ||||||||||||| ||| || | ||||||| || ||||||||||
Sbjct: 16 taaactaatataaaagcgtttagatcattaag-tagtgatctaaatgctcttatattagt 74
Query: 87 ttacagagggagtact 102
||||||||||||||||
Sbjct: 75 ttacagagggagtact 90
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
||||| ||||||||||||||| |||||| |||||| |||||| | |||||||| || ||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 79 atattagtttacagagggagt 99
|||||||||||| ||||||||
Sbjct: 68 atattagtttacggagggagt 88
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 17 actccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactt 76
|||||||| |||||||||||||| || ||||||||||| | |||| |||| ||| ||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattagtttacagaggga 97
||||||||||||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 83.8 bits (42), Expect = 4e-16
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 13 ttatactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaac 72
||||| ||||| |||||||||||||| ||| |||||| ||||| || |||||||||
Sbjct: 92 ttatattcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaat 33
Query: 73 acttttatattagtttacagagggagtac 101
||| |||||||||||||||||||||||||
Sbjct: 32 actcttatattagtttacagagggagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||||||||||| || ||||||| ||||||||| | |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 tttatattagtttac 90
||||||||||||||
Sbjct: 65 cttatattagtttac 79
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
|||||||||| |||||||||||||| ||| ||||||||| ||||||| | |||||||| |
Sbjct: 135 atactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgc 76
Query: 75 ttttatattagt 86
| ||||||||||
Sbjct: 75 tcttatattagt 64
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 44 gtttagatcactaaaataataatctaaacacttttatattagtttacagagggagtactt 103
|||||||||| |||||| || | |||||| || |||||||||||||||||||||||||||
Sbjct: 61 gtttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagtactt 2
Query: 104 g 104
|
Sbjct: 1 g 1
Score = 71.9 bits (36), Expect = 2e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 30 actaatataanagcgtttagatcactaaaataataatctaaacacttttatattagttta 89
|||||||||| |||||||||||||||| |||| ||||||| || |||||||||||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 90 cagagggagta 100
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttag 49
|||||||||||||||||||||||| |||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttag 38
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 79.8 bits (40), Expect = 7e-15
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||||||||||||| ||||||| ||||||||||| |||||||| | |||||||| ||
Sbjct: 5 tactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgct 64
Query: 76 tttatattagtttacagagggagtact 102
||||||| ||||| |||||| ||||
Sbjct: 65 cttatatttctttactgagggactact 91
Score = 58.0 bits (29), Expect = 3e-08
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 19 tccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacactttt 78
|||||| ||||| ||||||| |||||||||||||||| || |||||||| | ||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 79 atattagtttacagagggagtact 102
||||| ||||||||||||||||||
Sbjct: 26 atatttgtttacagagggagtact 3
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| ||||| ||||||| ||| |||||||||||||| || | |||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcacta 56
||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 4 atactccctctgtaaactaatataagagcattcagatcacta 45
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 75.8 bits (38), Expect = 1e-13
Identities = 79/92 (85%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 20 ccctctgtaaactaatataanagcgtttagatcactaaaataat--aatct-----aaac 72
|||||||||||||||||||| ||| ||||||||||||||||| | |||| ||||
Sbjct: 9 ccctctgtaaactaatataagagcatttagatcactaaaatagtgagatctaaatgaaac 68
Query: 73 acttttatattagtttacagagggagtacttg 104
|| ||||||||||||||||||||||||||||
Sbjct: 69 gctcttatattagtttacagagggagtacttg 100
Score = 58.0 bits (29), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgttt 47
|||||||||||||||||||||||| |||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 75.8 bits (38), Expect = 1e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||||| |||||||| ||||||| ||||| |||||||||||| || | |||||||||||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 76 tttatattagtttacagagggagta 100
||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 73.8 bits (37), Expect = 4e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaa 71
|||||||||||||||||||||||| ||| |||||||||||||| || | |||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagtactt 103
|||||||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagtactt 2
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| ||| |||||||||||| || | ||||||| ||
Sbjct: 87 tactccctccgtaaactaatataagagcatttagatcactact-tagtgatctaaatgct 29
Query: 76 tttatattagtttacagagg 95
||||||||||||||||||||
Sbjct: 28 tttatattagtttacagagg 9
Score = 73.8 bits (37), Expect = 4e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 cctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacacttttat 80
||||||||||||||||||| ||| ||||||||||| || || | ||||||| || ||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcact-aagtagtgatctaaatgctcttat 67
Query: 81 attagtttacagagggagta 100
|||||||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 69.9 bits (35), Expect = 7e-12
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataanagcgtttagatcactaa--aataataatctaaacactt 76
||||||||||||||||||||| | | ||||||||||||| | || | ||||||| |
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattagtttacagagggagtac 101
|||||||||||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
Score = 63.9 bits (32), Expect = 4e-10
Identities = 76/90 (84%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcacta--aaataataatctaaaca 73
|||||||||||||||||||||||| | | |||||||||||| | || | |||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 74 cttttatattagtttacagagggagtactt 103
| ||||||||||||||||||||| |||||
Sbjct: 31 gtcttatattagtttacagagggaatactt 2
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
|||| |||||||||| ||||||| ||||||||||||||| || || | |||||||| ||
Sbjct: 5 tactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgct 64
Query: 76 tttatattagtttacagaggg 96
||||||| |||||||||||
Sbjct: 65 cttatatttctttacagaggg 85
Score = 58.0 bits (29), Expect = 3e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 ttatactccctctgtaaactaatataanagcgtttagatcacta 56
|||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 92 ttatacaccctctgtaaagaaatataagagcgtttagatcacta 49
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 44 gtttagatcactaaaataataatctaaacacttttatattagtttacagagggagtac 101
||||||||||||||| || | ||||||||||| ||||||| ||||||||||||||||
Sbjct: 31 gtttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagtac 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcacta 56
||||||||||||||| ||||||| || |||||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcacta 47
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 65.9 bits (33), Expect = 1e-10
Identities = 76/91 (83%), Gaps = 6/91 (6%)
Strand = Plus / Plus
Query: 14 tatactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaaca 73
||||||||||||||||| ||||||| |||||||||||| ||| | ||||||||
Sbjct: 3 tatactccctctgtaaagaaatataagagcgtttagatc------atagtgatctaaacg 56
Query: 74 cttttatattagtttacagagggagtacttg 104
|| ||||||| |||||||||||||||||||
Sbjct: 57 ctcttatatttctttacagagggagtacttg 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/85 (83%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||||||||| ||||||| ||||||||||||||| || |||||||| ||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcact------atgatctaaacgct 30
Query: 76 tttatattagtttacagagggagta 100
||||||| |||||||||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 63.9 bits (32), Expect = 4e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaata 61
|||||||||||||||| ||||||| | |||||||||||||||||||
Sbjct: 4 atactccctctgtaaagaaatataagatcgtttagatcactaaaata 50
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| ||||| ||||||| |||||||||| ||||||| || | ||||||| ||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 76 tttatattagtttacagagggagtac 101
||||||| |||| |||||||||||
Sbjct: 65 cttatatttctttatagagggagtac 90
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 60.0 bits (30), Expect = 6e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcacta 56
|||||||| |||||| |||||||| ||||||||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcacta 52
Score = 48.1 bits (24), Expect = 2e-05
Identities = 73/89 (82%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaa---taataatctaaa 71
||||||||||||| || ||||| | |||||||||||||||| | || | |||||||
Sbjct: 4 atactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaa 63
Query: 72 cacttttatattagtttacagagggagta 100
| || |||||||| |||||| ||||||||
Sbjct: 64 cgctcttatattattttacatagggagta 92
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 22 ctctgtaaactaatataanagcgtttagatcacta 56
|||||||||| ||||||| ||||||||||||||||
Sbjct: 11 ctctgtaaacaaatataagagcgtttagatcacta 45
Score = 54.0 bits (27), Expect = 4e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 33 aatataanagcgtttagatcactaaaataataatctaaacacttttatattagtttacag 92
||||||| || || |||||||||||| || | |||||||| || ||||||| ||||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttacag 13
Query: 93 ag 94
||
Sbjct: 12 ag 11
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 69 aaacacttttatattagtttacagagggagta 100
||||||| ||||||||||||||||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgttt 47
|||||||||||||||||||||||| || ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
Score = 44.1 bits (22), Expect = 4e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcg 44
||||||||| |||||||||||||| ||||
Sbjct: 74 tactccctcggtaaactaatataagagcg 46
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 15 atactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacac 74
|||||||||| ||||||||||||| ||| |||||| ||||| | |||||||||
Sbjct: 90 atactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgt 31
Query: 75 ttttatattagtttacagagggagta 100
| |||||||||||||| |||||||||
Sbjct: 30 tcttatattagtttacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| |||||||||||||| | | ||||||| ||| || || | |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 tttatattagtttacagagggagta 100
||||||||||||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 atactccctctgtaaactaatataanagc 43
||||||||||||||||||||||||| |||
Sbjct: 4 atactccctctgtaaactaatataagagc 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 77 ttatattagtttacagagggagta 100
||||||||||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataanagcgt 45
||||||||| |||||||||||||| |||||
Sbjct: 62 tactccctccgtaaactaatataagagcgt 33
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 69/85 (81%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataanagcgtttagatcactaaaataataatctaaacact 75
||||||||| ||| | ||||||| | ||||||||||||||| || | ||||||| |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 76 tttatattagtttacagagggagta 100
||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
