miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 133 bits (67), Expect = 5e-31
Identities = 83/89 (93%)
Strand = Plus / Minus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 91 actactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacg 32
Query: 74 ctcttatattantttacagagggagtact 102
||||||||||| |||||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagtact 3
Score = 85.7 bits (43), Expect = 1e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||||||||| ||||||| || | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 125 bits (63), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactc 76
|||||||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 77 ttatattantttacagagggagtac 101
|||||||| ||||| ||||||||||
Sbjct: 28 ttatattaatttacggagggagtac 4
Score = 83.8 bits (42), Expect = 5e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||| ||||||||||| |||| ||||||| || |||||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgct 64
Query: 76 cttatattantttacagagggagt 99
||||||||| ||||| ||||||||
Sbjct: 65 cttatattagtttactgagggagt 88
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 121 bits (61), Expect = 2e-27
Identities = 80/87 (91%)
Strand = Plus / Minus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
||||||||||| |||||||||||||||||| |||| |||| ||||||| |||||||||||
Sbjct: 91 actactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaaca 32
Query: 74 ctcttatattantttacagagggagta 100
||||||||||| ||||| |||||||||
Sbjct: 31 ctcttatattagtttacggagggagta 5
Score = 95.6 bits (48), Expect = 1e-19
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 15 ctactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacac 74
|||||||||||||||||||||||||||| ||||| ||||||| ||||||| |||| |
Sbjct: 4 ctactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgc 63
Query: 75 tcttatattantttacagagggagta 100
|||||||||| ||||| |||||||||
Sbjct: 64 tcttatattagtttaccgagggagta 89
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 117 bits (59), Expect = 3e-26
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||| ||||
Sbjct: 65 cttatattagtttacagaggaagta 89
Score = 81.8 bits (41), Expect = 2e-15
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||| |||| |||||||||||||||||| |||| ||||||| || ||| |||||| ||
Sbjct: 89 tacttcctctgtaaactaatataagagcatttagatcactattttagtgacctaaacgct 30
Query: 76 cttatattantttacagagggagtact 102
||||||||| ||||| |||||||||||
Sbjct: 29 cttatattagtttacggagggagtact 3
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 111 bits (56), Expect = 2e-24
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 15 ctactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacac 74
|||||||||| ||||||||||||||||||| ||| ||||||||| || |||||||| | |
Sbjct: 90 ctactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgc 31
Query: 75 tcttatattantttacagagggagta 100
|||||||||| |||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagta 5
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||||| ||| ||||||| || |||||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 109 bits (55), Expect = 8e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||||||||||||||||| |||||||| | ||||||||| |||||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||||| |||||| ||||||| || | ||||||| ||
Sbjct: 89 tactccctctgtaaactaatataagaacgtttagatcactattttagtattctaaacgct 30
Query: 76 cttatattantttacagagggagtac 101
|||||||| ||||| ||||||||||
Sbjct: 29 tttatattagtttacggagggagtac 4
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 109 bits (55), Expect = 8e-24
Identities = 80/89 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||| || |||| || |||||| || |||||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 76 cttatattantttacagagggagtacttg 104
||||||||| |||||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtacttg 1
Score = 77.8 bits (39), Expect = 3e-14
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||| ||||| ||||||| || | || |||| |||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagatcactagtttagtaatttaaaaact 64
Query: 76 cttatattantttacagagggagta 100
|||||||| |||||||||||||||
Sbjct: 65 tttatattagtttacagagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 109 bits (55), Expect = 8e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||||||| |||| |||||||||||| | |||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
Score = 101 bits (51), Expect = 2e-21
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||||||||||||||||||||| || |||| || ||||||||| ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 107 bits (54), Expect = 3e-23
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct: 91 actactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaaca 32
Query: 74 ctcttatattantttacagagggagtac 101
|||||||||| |||| |||||||||||
Sbjct: 31 ctcttatattggtttatagagggagtac 4
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| |||||||||| ||||| |||||||||||| || ||||||| ||
Sbjct: 5 tactccctctataaaccaatataagagtgtttagatcactaaaatagtgttctaaacgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 105 bits (53), Expect = 1e-22
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||||||||| ||||||||| || |||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 76 cttatattantttacagagggagtact 102
||||||||| || ||| ||||||||||
Sbjct: 65 cttatattagttcaca-agggagtact 90
Score = 91.7 bits (46), Expect = 2e-18
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 29 aactaatataagagcgtttanatcactaaaataatgatctaaacactcttatattanttt 88
|||||||||||||||||||| ||||||| || |||||||||| ||||||||||| |||
Sbjct: 76 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 17
Query: 89 acagagggagta 100
||||||||||||
Sbjct: 16 acagagggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 103 bits (52), Expect = 5e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactctt 78
|||||||||||||||||||||||||||||| | |||||| |||||||||||| || ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 79 atattantttacagagggagtacttg 104
|||||| |||||| ||||||||||||
Sbjct: 68 atattagtttacaaagggagtacttg 93
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 101 bits (51), Expect = 2e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 15 ctactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacac 74
|||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |
Sbjct: 4 ctactccctctgtaaattaatataagagcgtttggatcactaaaatagtgatctaaacgc 63
Query: 75 tcttatattantttacagagg 95
|||||||||| ||||| ||||
Sbjct: 64 tcttatattagtttacggagg 84
Score = 99.6 bits (50), Expect = 8e-21
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 21 cctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactcttat 80
|||||||||||||||||||||||||||| ||||||| || ||||| |||| |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 81 attantttacagagggagta 100
|||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 99.6 bits (50), Expect = 8e-21
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||| ||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 76 cttatatta 84
|||||||||
Sbjct: 74 cttatatta 66
Score = 81.8 bits (41), Expect = 2e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 30 actaatataagagcgtttanatcactaaaataatgatctaaacactcttatattanttta 89
||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||
Sbjct: 64 actaatataagagcgtttagatcactattttaatgatctaaatgctcttatattagttta 123
Query: 90 cagagggagta 100
| |||||||||
Sbjct: 124 cggagggagta 134
Score = 77.8 bits (39), Expect = 3e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 44 gtttanatcactaaaataatgatctaaacactcttatattantttacagagggagtactt 103
||||| |||| |||||| |||| |||||| ||||||||||| ||||||||||||||||||
Sbjct: 61 gtttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagtactt 2
Query: 104 g 104
|
Sbjct: 1 g 1
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgttta 48
||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgttta 37
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 13 tactactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaac 72
|||||||||||| ||||||||||||||||||||||| || |||||| || || ||||||
Sbjct: 2 tactactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaat 61
Query: 73 actcttatattantttacagagggagtactt 103
|| |||||||| ||||||| ||||||||||
Sbjct: 62 gcttttatattagtttacagggggagtactt 92
Score = 69.9 bits (35), Expect = 7e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||| | |||||||||||||| ||| |||| | ||||| || | |||||||| ||
Sbjct: 89 tactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgct 30
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 95.6 bits (48), Expect = 1e-19
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 15 ctactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacac 74
||||||| || |||||||| |||||||||||||| ||||||||| || | |||||||| |
Sbjct: 90 ctactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgc 31
Query: 75 tcttatattantttacagagggagta 100
|||||||||| ||||| |||||||||
Sbjct: 30 tcttatattaatttacggagggagta 5
Score = 85.7 bits (43), Expect = 1e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||| ||||||||||||||||| || |||| || |||||||||| ||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 76 cttatattantttacagagggagta 100
|||||| || |||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||| ||||||||||| |||| ||||||||| || |||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 76 cttatattantttacagagggagta 100
||||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||||||| || | ||||||| || ||||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagcattcagatcactactttagtgatctaaatgct 64
Query: 76 cttatattantttacagagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||| | | |||| ||||||||| || | |||||||||||
Sbjct: 89 tactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaacact 30
Query: 76 cttatattantttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 79.8 bits (40), Expect = 7e-15
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||||||||||||||| ||||| || |||| || ||||||||| |
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaatgtt 64
Query: 76 cttatattantttacagagggagtac 101
|||||||| ||||||||||||||||
Sbjct: 65 tttatattagtttacagagggagtac 90
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 93.7 bits (47), Expect = 5e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||| ||||||||||||||||| |||| || | ||||||| ||||||||| ||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 76 cttatattantttacagagggagta 100
|||||||| |||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||| ||| |||| ||||||| |||| ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagcatttagatcactattttaataatctaaatgct 64
Query: 76 cttatattantttacagagggagtac 101
||||||||| |||| ||||||||||
Sbjct: 65 cttatattagtttatggagggagtac 90
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 91.7 bits (46), Expect = 2e-18
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||||||||||||||||| |||||||| | |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataatagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattantttacagagggagtact 102
||||||||| |||||||||||||||||
Sbjct: 29 cttatattagtttacagagggagtact 3
Score = 83.8 bits (42), Expect = 5e-16
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||| ||||| || ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtgtttagataactaaaata--gttctaaacgct 62
Query: 76 cttatattantttacagagggagtact 102
|||||||| ||||| |||||||||||
Sbjct: 63 attatattagtttacggagggagtact 89
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 91.7 bits (46), Expect = 2e-18
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||||||||||||||||||||| | |||| || | |||||||||||
Sbjct: 87 tactccctccgtaaactaatataagagcgtttaga--actattttagttatctaaacact 30
Query: 76 cttatattantttacagagggagtact 102
|||||||| |||||||||||||||||
Sbjct: 29 tttatattagtttacagagggagtact 3
Score = 83.8 bits (42), Expect = 5e-16
Identities = 76/87 (87%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||| || ||||| || ||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtaaactaatataaaagtgtttagataactaaaata--gttctaaacgct 62
Query: 76 cttatattantttacagagggagtact 102
||||||||| ||||| |||||||||||
Sbjct: 63 cttatattagtttacggagggagtact 89
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactctt 78
|||||| |||||||||||||||| | |||| ||||||||| || ||||||||| ||||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 67
Query: 79 atattantttacagagggagtac 101
|||||| ||||||||||||||||
Sbjct: 68 atattagtttacagagggagtac 90
Score = 75.8 bits (38), Expect = 1e-13
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||||| | |||| ||||||| || ||||||||| |
Sbjct: 89 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 30
Query: 76 cttatattantttacagagggagtactt 103
||||||||| |||||||||||| |||||
Sbjct: 29 cttatattagtttacagagggaatactt 2
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 89.7 bits (45), Expect = 7e-18
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 13 tactactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaac 72
||||| ||||| ||||||||||||||||||||| | |||| |||||| ||||||||||
Sbjct: 2 tactattccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaac 61
Query: 73 actcttatattantttacagagggagt 99
||||||||||| ||||| ||||||||
Sbjct: 62 tctcttatattagtttacggagggagt 88
Score = 85.7 bits (43), Expect = 1e-16
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 17 actccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactc 76
|||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||| |||
Sbjct: 88 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 29
Query: 77 ttatattantttacagaggga 97
|||||||| |||||| |||||
Sbjct: 28 ttatattagtttacaaaggga 8
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 12 ttactactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaa 71
|||||||| |||| ||||| |||||||||||||||| |||||| || || |||||||||
Sbjct: 1 ttactactacctctgtaaagaaatataagagcgtttagatcactgaagtagtgatctaaa 60
Query: 72 cactcttatattantttacagaggg 96
| |||||||||| |||||||||||
Sbjct: 61 cgctcttatatttctttacagaggg 85
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 20 ccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactctta 79
||||| ||||| |||||||||||||||| ||||||| | |||||||||| ||||||
Sbjct: 85 ccctctgtaaagaaatataagagcgtttagatcactacttcagtgatctaaacgctctta 26
Query: 80 tattantttacagagggagta 100
|||| |||||||||| ||||
Sbjct: 25 tatttctttacagaggtagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 85.7 bits (43), Expect = 1e-16
Identities = 78/89 (87%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
|||||||||| | ||||||||||||| |||||||| |||| ||| || |||||||||
Sbjct: 3 actactcccttcataaactaatataaaagcgtttagatcattaag-tagtgatctaaatg 61
Query: 74 ctcttatattantttacagagggagtact 102
||||||||||| |||||||||||||||||
Sbjct: 62 ctcttatattagtttacagagggagtact 90
Score = 71.9 bits (36), Expect = 2e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||||||| |||| |||||| | ||||||||||||| ||
Sbjct: 88 tactccctctgtaaactaatataagagcatttagatcact-acttaatgatctaaacgct 30
Query: 76 cttatattanttta 89
|||||||| ||||
Sbjct: 29 tttatattagttta 16
>RF00906;MIR1122;EF067844.1/459123-459031 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactctt 78
||||| ||||||||||||||||||| |||| | ||||| || | ||||||| ||||||
Sbjct: 86 tcccttcgtaaactaatataagagcatttagaacactattttagtaatctaaatactctt 27
Query: 79 atattantttacagagggagtac 101
|||||| ||||||||||||||||
Sbjct: 26 atattagtttacagagggagtac 4
Score = 73.8 bits (37), Expect = 4e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||||||||||||||| |||| || ||||||||| || |||||| ||
Sbjct: 5 tactccctctgtaaactaatataagagtatttagattactaaaatagtgttctaaatgct 64
Query: 76 cttatattantttac 90
||||||||| |||||
Sbjct: 65 cttatattagtttac 79
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 81.8 bits (41), Expect = 2e-15
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||||| ||| |||| | |||| ||||||||| || |||||||||||||
Sbjct: 5 tactccctccgtaaataaatgtaagtg--tttagatcactaaagtagtgatctaaacact 62
Query: 76 cttatattantttacagagggagtac 101
|||||||| ||||||||||||||||
Sbjct: 63 cttatatttctttacagagggagtac 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 72/87 (82%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| |||||||||| ||||| ||||||| || |||||||||||
Sbjct: 87 tactccctctgtaaagaaatataagagtgtttagatcactactttagtgatctaaaca-- 30
Query: 76 cttatattantttacagagggagtact 102
|||| ||| ||||| |||||||||||
Sbjct: 29 cttacatttatttacggagggagtact 3
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 79.8 bits (40), Expect = 7e-15
Identities = 83/97 (85%), Gaps = 7/97 (7%)
Strand = Plus / Plus
Query: 15 ctactccctccgtaaactaatataagagcgtttanatcactaaaataat--gatct---- 68
|||| ||||| |||||||||||||||||| |||| |||||||||||| | |||||
Sbjct: 4 ctaccccctctgtaaactaatataagagcatttagatcactaaaatagtgagatctaaat 63
Query: 69 -aaacactcttatattantttacagagggagtacttg 104
|||| ||||||||||| |||||||||||||||||||
Sbjct: 64 gaaacgctcttatattagtttacagagggagtacttg 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgttt 47
||||||||| ||||||||||||||||||||||
Sbjct: 96 tactccctctgtaaactaatataagagcgttt 65
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 79.8 bits (40), Expect = 7e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
|||||||||||||||||||||||||||||| |||| |||||| | || |||||||||
Sbjct: 89 actactccctccgtaaactaatataagagcatttagatcact-acttagtgatctaaatg 31
Query: 74 ctcttatattantttacagagg 95
|| |||||||| ||||||||||
Sbjct: 30 cttttatattagtttacagagg 9
Score = 67.9 bits (34), Expect = 3e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 cctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactcttat 80
|||| |||||||||||||| ||| |||| |||||||| || ||||||||| |||||||
Sbjct: 9 cctctgtaaactaatataaaagcatttagatcactaag-tagtgatctaaatgctcttat 67
Query: 81 attantttacagagggagta 100
|||| ||||| |||||||||
Sbjct: 68 attagtttacggagggagta 87
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||||||||||||| ||| |||| || |||||||||||| | |||| | |
Sbjct: 5 tactccctctgtaaactaatataaaagcatttaaattactaaaataatgttttaaataat 64
Query: 76 cttatattantttacagagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 tttatattagtttacggagggagta 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataa 39
||||||||||||||||||||||||
Sbjct: 89 tactccctccgtaaactaatataa 66
Score = 44.1 bits (22), Expect = 4e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 77 ttatattantttacagagggagtac 101
|||||||| ||||||||||||||||
Sbjct: 28 ttatattagtttacagagggagtac 4
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 77.8 bits (39), Expect = 3e-14
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||| || ||||| ||||||||||||| || ||||||||| || | |||||||||||
Sbjct: 5 tactccttctgtaaagaaatataagagcgtctagatcactaaagtagttatctaaacact 64
Query: 76 cttatattantttacagagggagta 100
|||||||| ||||| |||||||||
Sbjct: 65 cttatatttctttacggagggagta 89
Score = 67.9 bits (34), Expect = 3e-11
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 14 actactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaaca 73
||||||||||||||||| |||||||||| ||||| || |||| || ||||||| ||
Sbjct: 91 actactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacg 32
Query: 74 ctcttatattantttacagagggagtac 101
|||||||||| |||||||| |||||||
Sbjct: 31 ctcttatatttctttacagaaggagtac 4
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 73.8 bits (37), Expect = 4e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaa 71
||||||||| |||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcttttagatcactaaagtagtgatctaaa 60
Score = 69.9 bits (35), Expect = 7e-12
Identities = 79/95 (83%), Gaps = 7/95 (7%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttana-------tcactaaaataatgatct 68
|||||||||| |||||||||||||||||||||| | |||||| || ||||||
Sbjct: 96 tactccctccttaaactaatataagagcgtttagactttagatcactactttagtgatct 37
Query: 69 aaacactcttatattantttacagagggagtactt 103
||| ||||||||||| ||||||||||||||||||
Sbjct: 36 aaaagctcttatattagtttacagagggagtactt 2
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 71.9 bits (36), Expect = 2e-12
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 19 tccctccgtaaactaatataagagcgtttanatcactaa--aataatgatctaaacactc 76
|||||| |||||||||||||||| | |||| |||||||| | || ||||||||| ||
Sbjct: 8 tccctctgtaaactaatataagaccttttagatcactaagtagtagtgatctaaaaggtc 67
Query: 77 ttatattantttacagagggagtac 101
|||||||| ||||||||||||||||
Sbjct: 68 ttatattagtttacagagggagtac 92
Score = 65.9 bits (33), Expect = 1e-10
Identities = 76/90 (84%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcacta--aaataatgatctaaaca 73
||||||||| |||||||||||||||| | |||| ||||||| | || |||||||||
Sbjct: 91 tactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaag 32
Query: 74 ctcttatattantttacagagggagtactt 103
|||||||||| |||||||||||| |||||
Sbjct: 31 gtcttatattagtttacagagggaatactt 2
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| |||||||||||||||| | ||||||| || | ||||||| ||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 76 cttatattantttacagagggagtac 101
|||||||| |||| |||||||||||
Sbjct: 65 cttatatttctttatagagggagtac 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 72/88 (81%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| |||| ||||||||||| |||| || |||| || || ||||||| ||
Sbjct: 89 tactccctctataaagaaatataagagcatttagataactactttagtgctctaaacgct 30
Query: 76 cttatattantttacagagggagtactt 103
|||||||| ||||| ||||||||||||
Sbjct: 29 cttatatttctttaccgagggagtactt 2
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/89 (84%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| |||||||||||||||| |||| || |||||||||| ||
Sbjct: 5 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 58
Query: 76 cttatattantttacagagggagtacttg 104
|||||||| |||||||||||||||||||
Sbjct: 59 cttatatttctttacagagggagtacttg 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/85 (84%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| |||||||||||||||| ||||||| |||||||||| ||
Sbjct: 83 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 30
Query: 76 cttatattantttacagagggagta 100
|||||||| |||||||||||||||
Sbjct: 29 cttatatttctttacagagggagta 5
>RF00906;MIR1122;AK251798.1/892-984 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 69.9 bits (35), Expect = 7e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||||||||||||||||||| | |||| || ||| || || || |||||| ||
Sbjct: 5 tactccctccgtaaactaatataagaacatttagattactgaagtagtgttctaaatgct 64
Query: 76 cttatattantttacagagggagta 100
||||||||| |||| |||||||||
Sbjct: 65 cttatattagtttatggagggagta 89
Score = 54.0 bits (27), Expect = 4e-07
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
|||||||||| ||||||||||||||||| |||| | ||||| | | ||||||| |
Sbjct: 89 tactccctccataaactaatataagagcatttagaacactacttcagtaatctaaatgtt 30
Query: 76 cttatattantttacagagggagta 100
||||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 19 tccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacactctt 78
|||||| ||||| |||||||||||||||| ||||||| || ||||||||| | |||
Sbjct: 86 tccctcagtaaagaaatataagagcgtttagatcactattttagagatctaaacgccctt 27
Query: 79 atattantttacagagggagtact 102
||||| |||||||||||||||||
Sbjct: 26 atatttgtttacagagggagtact 3
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum (bread
wheat)
Length = 92
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 26 gtaaactaatataagagcgtttanatcactaaaataatgatctaaacactcttatattan 85
|||||| |||||||||||||| | |||||| || || ||| |||||| ||||||||||
Sbjct: 79 gtaaacaaatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttc 20
Query: 86 tttacagagggagta 100
||||| |||||||||
Sbjct: 19 tttacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcacta 56
||||||||||||||| |||||||||||||||| ||||||
Sbjct: 5 tactccctccgtaaagaaatataagagcgtttaggtcacta 45
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 26 gtaaactaatataagagcgtttanatcactaaaataatgatctaaacactcttatatt 83
|||||| |||||||||||||||| ||||||| || ||||||| |||||||||||||
Sbjct: 15 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatt 72
>RF00906;MIR1122;AY853252.1/36161-36096 4513:Hordeum vulgare
Length = 66
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 15 ctactccctccgtaaactaatataagagcgt 45
|||||||||||||||||||||||||||||||
Sbjct: 63 ctactccctccgtaaactaatataagagcgt 33
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagc 43
||||||||| ||||||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagc 32
Score = 48.1 bits (24), Expect = 2e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 74 ctcttatattantttacagagggagta 100
||||||||||| |||||||||||||||
Sbjct: 31 ctcttatattagtttacagagggagta 5
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||||||| | ||||||||| ||||| ||||||||| || | ||||||| |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 76 cttatattantttacagagggagta 100
|||||||| |||||||||||||||
Sbjct: 65 cttatatttctttacagagggagta 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaataatgatctaaacact 75
||||||||| ||||| ||||||||| | |||| || |||| || ||||||||||| |
Sbjct: 89 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 30
Query: 76 cttatattantttacagagggagtac 101
|||||||| | ||| ||||||||||
Sbjct: 29 cttatatttctgtacggagggagtac 4
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 58.0 bits (29), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 69 aaacactcttatattantttacagagggagta 100
|||||||||||||||| |||||||||||||||
Sbjct: 36 aaacactcttatattagtttacagagggagta 5
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcg 44
||||||||| |||||||||||||||||||
Sbjct: 74 tactccctcggtaaactaatataagagcg 46
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgttt 47
||||||||| ||||||||||||||||| ||||
Sbjct: 5 tactccctctgtaaactaatataagagtgttt 36
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcacta---aaataatgatctaaac 72
|||||||| ||||| ||||||||||||||||| ||||||| | || ||||||||||
Sbjct: 92 tactccctatgtaaaataatataagagcgtttagatcactagagtagtagtgatctaaac 33
Query: 73 actcttatattantttacagagggagta 100
|||| ||||| || ||||||||||||
Sbjct: 32 gctctcatatttattcacagagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 73/88 (82%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaa---taatgatctaaac 72
||||||||| || || ||||| |||||||||| ||||||| | || ||||||||||
Sbjct: 5 tactccctctgtgaataaatatgagagcgtttagatcactactactctagtgatctaaac 64
Query: 73 actcttatattantttacagagggagta 100
||||||||||| |||||| ||||||||
Sbjct: 65 gctcttatattattttacatagggagta 92
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 54.0 bits (27), Expect = 4e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaata 61
||||||||| ||||| ||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctctgtaaagaaatataagatcgtttagatcactaaaata 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 63 tgatctaaacactcttatattantttacagagggagta 100
|||||||||| ||||||||| |||||||||||||||
Sbjct: 42 tgatctaaacgatcttatatttctttacagagggagta 5
>RF00906;MIR1122;EU835198.1/64297-64202 85692:Triticum turgidum
subsp. dicoccoides
Length = 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 16 tactccctccgtaaactaatataagagcgtttanatcactaaaata 61
|||||| |||||||| |||| |||||||| || ||||||||||||
Sbjct: 92 tactccatccgtaaagaaatacaagagcgtctagatcactaaaata 47
