miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | ||||||||||| |||||||||||||||| ||||||||||| || |||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
|||||||||||||||||||||||| |||||||||||||
Sbjct: 64 tacaaagttgagacacttattttgggatggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 82 agacacttattttgagatggagggagtatt 111
|||||||||||||| || ||||||||||||
Sbjct: 32 agacacttattttgggacggagggagtatt 3
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | | ||||||||| |||||||||| |||||||| |||||||| || ||||
Sbjct: 4 atactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctag 63
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
||||||||||||||| |||||||| || ||||||||||
Sbjct: 64 tacaaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 28 aaaataaatgtcttgagcttagtacaaatttgtactcgaactagtacaaagttgagacac 87
||||||| |||||| |||||||||||| |||||||| || ||| |||||||||||||||
Sbjct: 20 aaaataagtgtcttaagcttagtacaactttgtactagagctaatacaaagttgagacag 79
Query: 88 ttattttgagatggagggagtat 110
||||||||||| |||||||||||
Sbjct: 80 ttattttgagacggagggagtat 102
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| |||||| ||||||||| |||||| |||| || |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagtatt 111
| |||||||||||| |||||||| || ||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 36 tgtcttgagcttagtacaaatttgtactcgaactagtacaaagttgagacacttattttg 95
||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 35 tgtcttgagcttagtacaactttgtactaaagttagtacaaagttgagacacttattttg 94
Query: 96 agatggagggagtat 110
||||||||||||||
Sbjct: 95 ggatggagggagtat 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 catactcccttcatcccaaaataaatgtct 40
|||||||||| ||||||||||||| |||||
Sbjct: 110 catactccctccatcccaaaataagtgtct 81
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 99.6 bits (50), Expect = 8e-21
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 24 tcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagtacaaagttgag 83
||||||||||| ||||| ||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 16 tcccaaaataactgtctcaagcctagtacaactttgtactagaactagtacaaagttgag 75
Query: 84 acacttattttgagatggagggagta 109
|||||||||||| || ||||||||||
Sbjct: 76 acacttattttggga-ggagggagta 100
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| |||| |||||||| ||||| |||||||||||| |||||| | || ||||
Sbjct: 4 atactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctag 63
Query: 72 tacaaagttgagacacttattttg 95
||||||||||||||||||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 79 ttgagacacttattttgagatggagggagtat 110
|||||||| |||||||||||||||||||||||
Sbjct: 35 ttgagacagttattttgagatggagggagtat 4
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| |||||| ||||||||| |||||| || | || |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagtatt 111
| |||||||||||| |||||||| || ||||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| ||||| |||||||| || |||||||| | |||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||||||||||| || |||||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagtat 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 79 ttgagacacttattttgagatggagggagta 109
||||||||||||||||| || ||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | || |||||||| |||||| | |||||||||| |||||||| || |||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagta 109
|||| ||||||||| ||||||||||| |||||||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 82 agacacttattttgagatggagggagta 109
||||||||||||||||| ||||||||||
Sbjct: 32 agacacttattttgagacggagggagta 5
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | | ||||||||| | ||| |||||||||||| |||||||| || ||||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 72 tacaaagttgagacacttattttgagatggagggagtat 110
|||||| ||||||||||||||||| | |||||||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggagggagtat 4
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 44 gcttagtacaaatttgtactcgaactagtacaaagttgagacacttattttgagatggag 103
||||||||||| |||||||| || ||||||||||||||||||| ||||||||| | ||||
Sbjct: 36 gcttagtacaactttgtactagagctagtacaaagttgagacatttattttgaaacggag 95
Query: 104 ggagta 109
||||||
Sbjct: 96 ggagta 101
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 83.8 bits (42), Expect = 5e-16
Identities = 85/98 (86%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | || |||||||| ||||| | ||| |||||| |||||||| || ||||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
||||||||||||||| |||||||| |||||||||||||
Sbjct: 63 tacaaagttgagacagttattttgggatggagggagta 100
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 71 gtacaaagttgagacacttattttgagatggagggagtatta 112
|||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 43 gtacaaagttgagacagttattttgagacggagggagtatta 2
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | ||||||||||| ||||| |||||||||||| |||||||| | ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaa 63
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
||||||||||||||| |||||||| || ||||||||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 79 ttgagacacttattttgagatggagggagtat 110
||||||||||||||||| || |||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagtat 4
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 79.8 bits (40), Expect = 8e-15
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | ||||||||||| ||||| | |||||||||| ||| |||| || |||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttag 63
Query: 72 tacaaagttgagacacttattttgagatggagggagtatt 111
||||||| |||||||||||||||| || ||||||||||||
Sbjct: 64 tacaaag-tgagacacttattttgggacggagggagtatt 102
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 78 gttgagacacttattttgagatggagggagtat 110
|||||||||||||||||| || |||||||||||
Sbjct: 36 gttgagacacttattttgggacggagggagtat 4
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| ||||| | |||| ||||| |||||||| | |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 73 acaaagttgagacacttattttgagatggagggagtat 110
| ||||||||||||||||||||| || ||| |||||||
Sbjct: 41 ataaagttgagacacttattttgggacggatggagtat 4
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 24 tcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagtacaaagttgag 83
||||||||||| |||||| |||||||||||| ||| ||| || ||||||||||||| ||
Sbjct: 16 tcccaaaataagtgtcttaagcttagtacaattttatacatgagctagtacaaagttaag 75
Query: 84 acacttattttgagatggagggagta 109
||| ||||||| || ||||||||||
Sbjct: 76 acagatattttgggacggagggagta 101
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | ||||||||||| ||||| |||||||||||| ||||||| | ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaa 63
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
||||||||||||||| |||||||| || ||||||||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 79 ttgagacacttattttgagatggagggagtat 110
||||||||||||||||| || |||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagtat 4
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | | ||||||||| |||||| |||||| ||||| |||||||| | ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 73 acaaagttgagacacttattttgagatggagggagta 109
|||||||||||||| |||||||| || ||||| ||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| | ||| | |||||||||| ||| |||| || |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagta 109
|||||||||| ||||||||||||| ||||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | || |||||||| ||||| ||| |||||||| |||||||| | ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagta 109
|||||||| |||||||||||||| || ||||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 79 ttgagacacttattttgagatggagggagta 109
|||||||||||||||||||| ||||||||||
Sbjct: 35 ttgagacacttattttgagacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 12 atactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactag 71
||||||||| | ||||||||||| ||||| | |||||||||| |||||||| || |||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttag 43
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
| ||| ||||||||||||||||| || ||| ||||||
Sbjct: 42 tgtaaaattgagacacttattttgggacggaaggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 78 gttgagacacttattttgagatggagggagtat 110
|||||||||||||||||| || |||||||||||
Sbjct: 70 gttgagacacttattttgggacggagggagtat 102
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 47 tagtacaaatttgtactcgaactagtacaaagttgagacacttattttgagatggaggga 106
|||||||| |||||| | | |||||||||||||||||||||||||||| || |||||||
Sbjct: 67 tagtacaactttgtattaaagctagtacaaagttgagacacttattttgggacggaggga 8
Query: 107 g 107
|
Sbjct: 7 g 7
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 77 agttgagacacttattttgagatggagggagta 109
||||||||||||||||||||||||||| |||||
Sbjct: 69 agttgagacacttattttgagatggagtgagta 101
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | ||||||||||| | ||| | |||||||||| ||| |||| || |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 73 acaaagttgagacacttattttgagatggagggagta 109
|||| ||||| ||||||||||||| ||||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | || ||||||||||||||| | ||||||| |||||| || | | |||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 73 acaaagttgagacacttattttg 95
|||||||| ||||| ||||||||
Sbjct: 41 acaaagttaagacagttattttg 19
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 45 cttagtacaaatttgtactcgaactagtacaaagttgagacacttattttgagatggagg 104
|||||||||| |||||||| | ||||||||| |||||||| |||||||| || |||||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 105 gagtat 110
||||||
Sbjct: 145 gagtat 150
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 15 ctcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagtac 74
|||||||| ||||||||||| ||||| | |||||||||| |||| ||| | ||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 75 aaagttgagac 85
|||||||||||
Sbjct: 67 aaagttgagac 77
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 60 tagtacaaagttgagtcacttattttgggacggagggagtat 101
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 60.0 bits (30), Expect = 7e-09
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 24 tcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagtacaaagttgag 83
||||||||||| | ||| | |||||||||| ||| |||| || |||| |||||||||
Sbjct: 90 tcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttgag 31
Query: 84 acacttattttgagatggagggagta 109
|||| |||||||||| ||||||||||
Sbjct: 30 acacctattttgagacggagggagta 5
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacggagggagtat 4
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagta 109
||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 88 tagtacaaagttgagtcacttattttgggatggagcgagta 128
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 83/100 (83%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtactcgaactagt 72
|||||||| | || |||||||| ||||| ||||||||| || |||| ||| | |||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 73 acaaagttgagacacttattttgagatggagggagtatta 112
| ||| || ||| ||||||||||||| |||||||||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggagggagtatta 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 79 ttgagacacttattttgagatggagggagta 109
|||||||| ||||||||||| ||||||||||
Sbjct: 70 ttgagacaattattttgagacggagggagta 100
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||| ||||||||| | || |||||||||||
Sbjct: 63 tagtacaaagttgagtcacttatttcgggacggagggagtat 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Minus
Query: 56 tttgtactcgaactagtacaaagttgaga--cacttattttgagatggagggagtat 110
|||||||| || ||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 60 tttgtactaaaaatagtataaagttgagatccacttattttgggacggagggagtat 4
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacagagggagtat 4
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 69 tagtacaaagttg-agacacttattttgagatggagggagta 109
||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 46 tagtacaaagttggagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 75 aaagttgagacacttattttgagatggagggag 107
||||||||||||||||||||| || ||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagggag 7
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 71 gtacaaagttgagacacttattttgagatggagggagtat 110
|||| |||||||||||||||||||| || ||||| |||||
Sbjct: 51 gtactaagttgagacacttattttgggacggaggaagtat 90
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 agacacttattttgagatggagggagta 109
|||||||||||||| |||||||||||||
Sbjct: 74 agacacttattttgggatggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 13 tactcccttcatcccaaaataaatgtcttgagcttagtacaaatttgtact 63
|||||||| ||||||||||||| |||||| ||||||||| ||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctttgctttagtacaactttgtact 51
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 tagtacaaagttgagacacttattttg 95
||||||||||||||| |||||||||||
Sbjct: 57 tagtacaaagttgagtcacttattttg 83
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 84 acacttattttgagatggagggagtat 110
|||||||||||| ||||||||||||||
Sbjct: 76 acacttattttgggatggagggagtat 102
>RF00906;MIR1122;AP003290.2/25910-26045 39947:Oryza sativa Japonica
Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 13 tactcccttcatcccaaaataaa 35
|||||||||||||||||||||||
Sbjct: 132 tactcccttcatcccaaaataaa 110
>RF01058;MIR806;AAAA02017657.1/5337-5097 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 89 tattttgagatggagggagtat 110
||||||||||||||||||||||
Sbjct: 22 tattttgagatggagggagtat 1
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 69 tagtacaaagttgagacacttattttgagatggagggagtat 110
||||||||||||||| || ||||||| |||||||||||||
Sbjct: 50 tagtacaaagttgagtcatctattttggaatggagggagtat 91
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 72 tacaaagttgagacacttattttgagatggagggagta 109
|||||||||||| |||||| |||| || ||||||||||
Sbjct: 42 tacaaagttgagtcacttaatttgggacggagggagta 5
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 69 tagtacaaagttgagacacttattttgaga 98
|||||||||||||| ||||||||||||||
Sbjct: 45 tagtacaaagttgaatcacttattttgaga 16
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa Japonica
Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 acatactcccttcatcccaaaataaa 35
||||||||||| ||||||||||||||
Sbjct: 121 acatactccctccatcccaaaataaa 96
