miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 220 bits (111), Expect = 4e-57
Identities = 123/127 (96%)
Strand = Plus / Plus
Query: 6 tacttcctccgttctgaattacttgtcttagatttgtctagatacggaggtatctagcac 65
|||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtcttagatttgtctagatacggagatatctagcac 64
Query: 66 taaaatgagtctagatacatcagtatctagacaaatccaagacaagtaatttggaacgga 125
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taaaatgagtctagatacatccgtatctagacaaatccaagacaagtaatttggaacgga 124
Query: 126 gggagta 132
|||||||
Sbjct: 125 gggagta 131
Score = 111 bits (56), Expect = 2e-24
Identities = 112/128 (87%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 6 tacttcctccgttctgaattacttgtcttagatttgtctagatacggaggtatctagcac 65
|||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctag-ac 73
Query: 66 taaaatgagt-ctagatacatcagtatctagacaaatccaagacaagtaatttggaacgg 124
| | | ||| ||||||| || ||||||||||||||| ||||||||||||| |||||||
Sbjct: 72 tcattttagtgctagatatctccgtatctagacaaatctaagacaagtaattcggaacgg 13
Query: 125 agggagta 132
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 155 bits (78), Expect = 2e-37
Identities = 117/130 (90%)
Strand = Plus / Minus
Query: 6 tacttcctccgttctgaattacttgtcttagatttgtctagatacggaggtatctagcac 65
|||| ||||||||| ||||||||||||| ||||||||||||||| || | ||||||||
Sbjct: 131 tactccctccgttccaaattacttgtcttcgatttgtctagatacagatatgtctagcac 72
Query: 66 taaaatgagtctagatacatcagtatctagacaaatccaagacaagtaatttggaacgga 125
||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 71 taaaatgagtctagatacatccgtatctagacaaatttaagacaagtaattcagaacgga 12
Query: 126 gggagtacat 135
||||||||||
Sbjct: 11 gggagtacat 2
Score = 137 bits (69), Expect = 4e-32
Identities = 116/129 (89%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 5 gtacttcctccgttctgaattacttgtcttagatttgtctagatacggaggtatctagca 64
||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 4 gtactccctccgttctgaattacttgtcttaaatttgtctagatacggatgtatctag-a 62
Query: 65 ctaaaatgagt-ctagatacatcagtatctagacaaatccaagacaagtaatttggaacg 123
|| | | ||| ||||| | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 63 ctcattttagtgctagacatatctgtatctagacaaatcgaagacaagtaatttggaacg 122
Query: 124 gagggagta 132
|||||||||
Sbjct: 123 gagggagta 131
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 117 bits (59), Expect = 4e-26
Identities = 113/131 (86%)
Strand = Plus / Minus
Query: 6 tacttcctccgttctgaattacttgtcttagatttgtctagatacggaggtatctagcac 65
|||||||||||||| || | ||||||||||||||| ||||||||||| ||||||| ||
Sbjct: 131 tacttcctccgttccaaaattcttgtcttagatttgcctagatacggatgtatctaatac 72
Query: 66 taaaatgagtctagatacatcagtatctagacaaatccaagacaagtaatttggaacgga 125
||||| | | || |||||||| |||| |||||||||| |||||||| | ||||| |||||
Sbjct: 71 taaaacgtgacttgatacatccgtatttagacaaatctaagacaagaattttgggacgga 12
Query: 126 gggagtacatg 136
|||||||||||
Sbjct: 11 gggagtacatg 1
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| |||||||| |||||| |||||||| | ||||||||||||| ||||
Sbjct: 76 tagatacatccgtatctaggcaaatctaagacaagaattttggaacggaggaagta 131
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacggaggtatc 59
||||||||||||||||||| ||||||| |||||
Sbjct: 26 cttgtcttagatttgtctaaatacggatgtatc 58
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 103 bits (52), Expect = 6e-22
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 22 aattacttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagat 81
|||| |||||||||||||||||||||||| || ||||||| || |||||| | || |||
Sbjct: 115 aatttcttgtcttagatttgtctagatacagatgtatctaatacgaaaatgtgacttgat 56
Query: 82 acatcagtatctagacaaatccaagacaagtaatttggaacggagggagtac 133
||||| ||||||||||||||| |||||||| | ||||| || ||||||||||
Sbjct: 55 acatccgtatctagacaaatctaagacaagaattttgggaccgagggagtac 4
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| ||||||||||||||| |||||||| ||||||| || |||||||||
Sbjct: 76 tagatacatctgtatctagacaaatctaagacaagaaatttgggacagagggagta 131
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 79.8 bits (40), Expect = 9e-15
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatc 86
||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||
Sbjct: 26 cttgtcttacatttgtttagataaagatgtatctaacactaaaatgtaactagatacatc 85
Query: 87 agtatctagacaaatccaagacaagtaatttggaacggagggagtaca 134
|||| ||||||||| |||||||| | ||||| |||||||| |||||
Sbjct: 86 cgtatttagacaaatttaagacaagaattttgggacggagggggtaca 133
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 79.8 bits (40), Expect = 9e-15
Identities = 91/108 (84%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatc 86
||||||||| |||||| |||||||||| ||||||| |||||||||| ||| |||||||
Sbjct: 110 cttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaactacatacatc 51
Query: 87 agtatctagacaaatccaagacaagtaatttggaacggagggagtaca 134
||| ||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 50 catatttagacaaatttaagacaacaattttgggacggagggagtaca 3
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 69.9 bits (35), Expect = 8e-12
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 30 gtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatcagt 89
||||||||||||| |||||| | | || |||| |||||||| | ||||||||||| ||
Sbjct: 107 gtcttagatttgtttagatatgaatgtgtctaacactaaaacatgactagatacatccgt 48
Query: 90 atctagacaaatccaagacaagtaatttggaacggagggagta 132
|| |||||||||| | |||||| | ||||| ||||||||||||
Sbjct: 47 atttagacaaatctatgacaagaattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacggaggtatctag 62
|||||| |||||||||||| ||||||| ||||||||
Sbjct: 26 cttgtcatagatttgtctaaatacggatgtatctag 61
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 37 atttgtctagatacggaggtatctag-cactaaaatgagtctagatacatcagtatctag 95
|||| |||||| ||||| |||||||| ||||||| ||| |||||||||| || | |||
Sbjct: 100 atttatctagacacggatgtatctagacactaaaca-agtatagatacatccgtgtttag 42
Query: 96 acaaatccaagacaagtaatttggaacggagggagtacatg 136
|||||| |||| ||| || ||||||||||||||||||||||
Sbjct: 41 acaaattcaagtcaactattttggaacggagggagtacatg 1
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 108 caagtaatttggaacggagggagta 132
|||||||||||||||||||||||||
Sbjct: 108 caagtaatttggaacggagggagta 132
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| |||||||||||||| |||||||| | ||||| ||||||||||||
Sbjct: 76 tagatacatccatatctagacaaatctaagacaagaattttgggacggagggagta 131
Score = 60.0 bits (30), Expect = 8e-09
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatc 86
||||||||||||||||||||||| ||| ||||||| ||||||| | | | ||||||||
Sbjct: 110 cttgtcttagatttgtctagatatggatgtatctaatactaaaacgtgagttgatacatc 51
Query: 87 agtatctagacaaatccaagacaagtaatttggaacggagggagta 132
||| |||| ||||| |||||||| | ||||| || || ||||||
Sbjct: 50 cctatttagaaaaatctaagacaagaattttgggacagaaggagta 5
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaa 69
|||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 79 cttgtcttagatttatctagatacggatgtatctaacactaaa 37
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatc 86
||||||||| |||||||||||||| | |||| || |||||||| | || |||||||
Sbjct: 26 cttgtcttacatttgtctagatacatatgtatttaatactaaaatatgacttcatacatc 85
Query: 87 agtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||| |||||||||| |||||||| | ||||| | ||||||||||
Sbjct: 86 cgtatttagacaaatctaagacaagaattttgggatggagggagta 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggaggtat 58
||||||||||||||||||| ||||||| ||||
Sbjct: 110 cttgtcttagatttgtctaaatacggatgtat 79
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 76 ctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| |||||| ||||||| |||||||| | ||||||||||||||||||
Sbjct: 61 ctagatacattcatatctaaacaaatctaagacaagaattttggaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
||||||||||| | |||||||||| | |||||||| | ||| | ||||||||||||
Sbjct: 77 tagatacatcaatttctagacaaagctaagacaagaattttaggacggagggagta 132
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggaggtatctagcactaaaatgagtctagatacatc 86
||||||| ||||| |||||||||||| ||||||| |||||||| | | |||||||||||
Sbjct: 110 cttgtctaggatttatctagatacggatgtatctaacactaaaacgtgactagatacatc 51
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 89 tatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||||||| |||||||| | ||||| ||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaagtttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagata 49
|||||||||||||||||||||||
Sbjct: 26 cttgtcttagatttgtctagata 48
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 54.0 bits (27), Expect = 5e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 74 gtctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
||||||||||||| |||| ||||||||| |||||||| | ||||||||| ||||||||
Sbjct: 62 gtctagatacatc-ttatcaagacaaatctaagacaagaattttggaacgaagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatac 50
||||||||||||||||||||||||
Sbjct: 76 cttgtcttagatttgtctagatac 53
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagtac 133
|||||||||| ||||||||||||| | | ||||| | ||||| |||||||||||||
Sbjct: 76 tagatacatccgtatctagacaaagctacaacaagaattttgggacggagggagtac 132
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 105 agacaagtaatttggaacggagggagtac 133
|||||||||||| ||||||||||||||||
Sbjct: 32 agacaagtaattcggaacggagggagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tacttcctccgttctgaattacttgtc 32
|||| ||||||||||||||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtc 85
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 gacaagtaatttggaacggagggagtaca 134
||||||||||| |||||||||||||||||
Sbjct: 117 gacaagtaattcggaacggagggagtaca 145
>RF00906;MIR1122;AY244513.1/784-861 4568:Triticum monococcum
Length = 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 96 acaaatccaagacaagtaatttggaacggagggagta 132
||||||| |||||||||||| |||| |||||||||||
Sbjct: 41 acaaatctaagacaagtaatatggatcggagggagta 5
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 76 ctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| ||||||||||||| |||||||| | ||||| ||||||||||||
Sbjct: 61 ctagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagta 5
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 76 ctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||| |||||| ||||||| |||||||| | ||||||||||||| ||||
Sbjct: 76 ctagatacattcatatctaaacaaatctaagacaagaattttggaacggaggtagta 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 77 tagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
||||||||||| | |||||||||| | |||||||| | ||| | ||||||||||||
Sbjct: 60 tagatacatcaatttctagacaaagctaagacaagaattttaggacggagggagta 5
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 taatttggaacggagggagtacat 135
||||||||||||||||||||||||
Sbjct: 134 taatttggaacggagggagtacat 157
>RF00906;MIR1122;ABXC01002751.1/4300-4149 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 taatttggaacggagggagtacat 135
||||||||||||||||||||||||
Sbjct: 128 taatttggaacggagggagtacat 151
>RF00906;MIR1122;AY963808.1/8398-8494 4565:Triticum aestivum (bread
wheat)
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 106 gacaagtaatttggaacggagggagtac 133
|||||||||| |||||||||||||||||
Sbjct: 31 gacaagtaatatggaacggagggagtac 4
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 110 agtaatttggaacggagggagtac 133
||||||||||||||||||||||||
Sbjct: 89 agtaatttggaacggagggagtac 112
>RF00906;MIR1122;EU660894.1/143713-143848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 95 gacaaatccaagacaagtaatttggaacggagggagtaca 134
||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 95 gacaaatggaagtcaagtattttggaacggagggagtaca 134
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 104 aagacaagtaatttggaacggagggagtacat 135
|||||||||| || ||||||||||||||||||
Sbjct: 72 aagacaagtatttaggaacggagggagtacat 103
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 89 tatctagacaaatccaagacaagtaatttggaacggagggagta 132
|||||||||||||| |||||||| | ||| | ||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaattttaggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 6 tacttcctccgttctgaattacttgtcttagatttgtctagata 49
|||| ||||||| || || | |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagatttgtctagata 48
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 106 gacaagtaatttggaacggagggagtac 133
||||||||||| ||||||||||||||||
Sbjct: 85 gacaagtaattcggaacggagggagtac 112
>RF00906;MIR1122;FJ184989.1/974-892 4565:Triticum aestivum (bread
wheat)
Length = 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 110 agtaatttggaacggagggagta 132
|||||||||||||||||||||||
Sbjct: 27 agtaatttggaacggagggagta 5
>RF00906;MIR1122;EU660899.1/111846-111744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 106 gacaagtaatttggaacggagggagta 132
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtattttggaacggagggagta 5
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 110 agtaatttggaacggagggagta 132
|||||||||||||||||||||||
Sbjct: 88 agtaatttggaacggagggagta 110
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacgga 53
|||||||||||||| ||||||||||||
Sbjct: 25 cttgtcttagatttatctagatacgga 51
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagata 49
|||||||||||||||||||||||
Sbjct: 26 cttgtcttagatttgtctagata 48
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 27 cttgtcttagatttgtctagatacggaggtatcta 61
||||||| |||||| |||||||||||| |||||||
Sbjct: 26 cttgtctaagatttatctagatacggatgtatcta 60
>RF00906;MIR1122;EU379326.1/1838-1972 269377:Poa palustris
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 74 gtctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagta 132
||||||||||||| | || | ||||||| ||| || |||||||||||||||||||||
Sbjct: 63 gtctagatacatccgcatgtggacaaatggaagtcatctaatttggaacggagggagta 5
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 taatttggaacggagggagtac 133
||||||||||||||||||||||
Sbjct: 124 taatttggaacggagggagtac 145
>RF00906;MIR1122;ABXC01003678.1/89613-89769 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 taatttggaacggagggagtac 133
||||||||||||||||||||||
Sbjct: 25 taatttggaacggagggagtac 4
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 105 agacaagtaatttggaacggagggag 130
|||| |||||||||||||||||||||
Sbjct: 84 agacgagtaatttggaacggagggag 109
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 tttggaacggagggagtacatg 136
||||||||||||||||||||||
Sbjct: 84 tttggaacggagggagtacatg 105
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 76 ctagatacatcagtatctagacaaatccaagacaagtaatttggaacggagggagtac 133
|||||||||| |||||| ||||||| ||||||| | ||||| |||||||||||||
Sbjct: 61 ctagatacattcatatctaaacaaatctaagacaataattttgggacggagggagtac 4
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 76 ctagatacatcagtatctagacaaatccaagacaagtaatttgga-acggagggagta 132
||||||||||| ||||||||||||| ||| |||| |||||| || ||||||||||||
Sbjct: 61 ctagatacatccatatctagacaaattcaaaacaa-taattttgagacggagggagta 5
