miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 206 bits (104), Expect = 7e-53
Identities = 122/128 (95%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtcttagatttgtctagatacggagatatctagcac 64
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
|||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 65 taaaatgagtctagatacatccgtatctagacaaatccaagacaagtaatttggaacgga 124
Query: 146 gggagtag 153
||||||||
Sbjct: 125 gggagtag 132
Score = 127 bits (64), Expect = 6e-29
Identities = 114/128 (89%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
||||||||||||||| ||||||||||||| ||||||||||||||| | |||||||| ||
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctag-ac 73
Query: 86 taaaattagt-ctagatacattcgtatctagacaaatccaagacaagtaattcggaacgg 144
| | ||||| ||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct: 72 tcattttagtgctagatatctccgtatctagacaaatctaagacaagtaattcggaacgg 13
Query: 145 agggagta 152
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 165 bits (83), Expect = 3e-40
Identities = 116/127 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
||||||||||||||| ||||||||||||| |||||||||||||||| | | ||||||||
Sbjct: 131 tactccctccgttccaaattacttgtcttcgatttgtctagatacagatatgtctagcac 72
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
|||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 71 taaaatgagtctagatacatccgtatctagacaaatttaagacaagtaattcagaacgga 12
Query: 146 gggagta 152
|||||||
Sbjct: 11 gggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 116/132 (87%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 25 gtactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagca 84
||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||| |
Sbjct: 4 gtactccctccgttctgaattacttgtcttaaatttgtctagatacggatgtatctag-a 62
Query: 85 ctaaaattagt-ctagatacattcgtatctagacaaatccaagacaagtaattcggaacg 143
|| | ||||| ||||| | || ||||||||||||||| ||||||||||||| ||||||
Sbjct: 63 ctcattttagtgctagacatatctgtatctagacaaatcgaagacaagtaatttggaacg 122
Query: 144 gagggagtagct 155
||||||||||||
Sbjct: 123 gagggagtagct 134
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 93.7 bits (47), Expect = 8e-19
Identities = 107/127 (84%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
||||||||| || || |||| ||||||||||||||||||||||||| | ||||||| ||
Sbjct: 131 tactccctctgtcccaaatttcttgtcttagatttgtctagatacagatgtatctaatac 72
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
||||| | || ||||||| |||||||||||||||| |||||||| | || || || ||
Sbjct: 71 gaaaatgtgacttgatacatccgtatctagacaaatctaagacaagaattttgggaccga 12
Query: 146 gggagta 152
|||||||
Sbjct: 11 gggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 97 tagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagtag 153
||||||||| ||||||||||||||| |||||||| |||| || || ||||||||||
Sbjct: 76 tagatacatctgtatctagacaaatctaagacaagaaatttgggacagagggagtag 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 23 aagtactccctccgttccgaattacttgtcttagatttgtctagatac 70
|||||||||||| || || || | ||||||||||||||||||||||||
Sbjct: 2 aagtactccctcggtcccaaaattcttgtcttagatttgtctagatac 49
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 105/127 (82%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
|||| |||||||||| || | ||||||||||||||| |||||||| | ||||||| ||
Sbjct: 131 tacttcctccgttccaaaattcttgtcttagatttgcctagatacggatgtatctaatac 72
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
||||| | || ||||||| ||||| |||||||||| |||||||| | || || |||||
Sbjct: 71 taaaacgtgacttgatacatccgtatttagacaaatctaagacaagaattttgggacgga 12
Query: 146 gggagta 152
|||||||
Sbjct: 11 gggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 25 gtactccctccgttccgaattacttgtcttagatttgtctagatac 70
||||||||||||| || || | ||||||||||||||||||| ||||
Sbjct: 4 gtactccctccgtcccaaaattcttgtcttagatttgtctaaatac 49
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 96 ctagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
|||||||||||| |||||| ||||||| |||||||| | || |||||||||||||||
Sbjct: 61 ctagatacattcatatctaaacaaatctaagacaagaattttggaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
||||||||||||||| || | |||||||||||||||| ||||||
Sbjct: 5 tactccctccgttccaaaattcttgtcttagatttgtttagata 48
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
|||||||||||| | || | ||||||||| ||||||||||||||| | |||| || ||
Sbjct: 5 tactccctccgtctcaaaattcttgtcttacatttgtctagatacatatgtatttaatac 64
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
|||||| | || |||||| ||||| |||||||||| |||||||| | || || | |||
Sbjct: 65 taaaatatgacttcatacatccgtatttagacaaatctaagacaagaattttgggatgga 124
Query: 146 gggagtag 153
||||||||
Sbjct: 125 gggagtag 132
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatctagcac 85
|||||||||||| || || | || ||||||||||||| |||||| | || |||| |||
Sbjct: 131 tactccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacac 72
Query: 86 taaaattagtctagatacattcgtatctagacaaatccaagacaagtaattcggaacgga 145
||||| | |||||||||| ||||| |||||||||| | |||||| | || || |||||
Sbjct: 71 taaaacatgactagatacatccgtatttagacaaatctatgacaagaattttgggacgga 12
Query: 146 gggagta 152
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 96 ctagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagtag 153
|||||||||||| ||||||||||||| |||||||| | || || |||||||||||||
Sbjct: 61 ctagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagtag 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||||||| || || | ||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagata 48
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 25 gtactccctccgttccgaattacttgtct 53
|||||||||||||||||||||||||||||
Sbjct: 4 gtactccctccgttccgaattacttgtct 32
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 125 agacaagtaattcggaacggagggagta 152
||||||||||||||||||||||||||||
Sbjct: 32 agacaagtaattcggaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtc 52
|||||||||||||| ||||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtc 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||| ||||||||||||||
Sbjct: 85 gacaagtaattcagaacggagggagta 111
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 100 atacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
|||||||| |||||||||||||| |||||||| | || || ||||||||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttgggacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||||||| || || | |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaacttcttgtcttagatttgtctagata 48
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 96 ctagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
|||||||||||| |||||| ||||||| |||||||| | || |||||||||| ||||
Sbjct: 76 ctagatacattcatatctaaacaaatctaagacaagaattttggaacggaggtagta 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||| |||||||||| || | |||||||||||||||| ||||||
Sbjct: 132 tactacctccgttccaaaattcttgtcttagatttgtttagata 89
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 24 agtactccctccgttccgaattacttgtc 52
|||||||||||||||||||||||||||||
Sbjct: 113 agtactccctccgttccgaattacttgtc 85
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||||||||||||||||||
Sbjct: 85 gacaagtaattcggaacggagggagta 111
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 97 tagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
||||||||| | |||||||||||||| |||||||| | || || ||||||||||||
Sbjct: 76 tagatacatccatatctagacaaatctaagacaagaattttgggacggagggagta 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||||||| || || | |||||||||||||||||||||||
Sbjct: 131 tactccctccgtcccaaaattcttgtcttagatttgtctagata 88
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 25 gtactccctccgttccgaattacttgtc 52
||||||||||||||||||||||||||||
Sbjct: 144 gtactccctccgttccgaattacttgtc 117
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||||||||||||||||||
Sbjct: 117 gacaagtaattcggaacggagggagta 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||||||||| ||||||||
Sbjct: 31 gacaagtaattcggaacgaagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtc 52
|||||||| ||||||||||||||||||
Sbjct: 5 tactcccttcgttccgaattacttgtc 31
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 97 tagatacattcgtatctagacaaatccaagacaag 131
||||||||||| |||||||||||||| ||||||||
Sbjct: 60 tagatacattcatatctagacaaatctaagacaag 26
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 cttgtcttagatttgtctagata 69
|||||||||||||||||||||||
Sbjct: 26 cttgtcttagatttgtctagata 48
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 agtactccctccgttccgaattacttgtct 53
|||||||||||||||| |||||||||||||
Sbjct: 113 agtactccctccgttcggaattacttgtct 84
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 125 agacaagtaattcggaacggagggagtag 153
||||||||||||| |||||||||||||||
Sbjct: 32 agacaagtaattccgaacggagggagtag 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtct 53
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgttcggaattacttgtct 32
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 125 agacaagtaattcggaacggagggagta 152
||||||||||||| ||||||||||||||
Sbjct: 84 agacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 47 cttgtcttagatttgtctagataca 71
|||||||||||||||||||||||||
Sbjct: 76 cttgtcttagatttgtctagataca 52
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||| |||||| || | |||||||||||||||||| ||||
Sbjct: 5 tactcccttcgttccaaaattcttgtcttagatttgtcttgata 48
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 94 gtctagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
||||||||||| || |||| ||||||||| |||||||| | || |||||| ||||||||
Sbjct: 62 gtctagataca-tcttatcaagacaaatctaagacaagaattttggaacgaagggagta 5
>RF00906;MIR1122;AY244513.1/784-861 4568:Triticum monococcum
Length = 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgt 62
||||||||||| ||| ||||||||||||||||||||
Sbjct: 5 tactccctccgatccatattacttgtcttagatttgt 41
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 116 acaaatccaagacaagtaattcggaacggagggagtag 153
||||||| |||||||||||| ||| ||||||||||||
Sbjct: 41 acaaatctaagacaagtaatatggatcggagggagtag 4
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 96 ctagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
|||||||||||| |||||| ||||||| ||||||| | || || ||||||||||||
Sbjct: 61 ctagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 24 agtactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||||||||| || || | ||||||||||||||| ||||||
Sbjct: 3 agtactccctccgtcccaaaattattgtcttagatttgtttagata 48
>RF00906;MIR1122;FJ394373.1/383-480 4573:Aegilops speltoides
Length = 98
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgt 62
|||||||||||| |||||||| ||| |||||||||||
Sbjct: 94 tactccctccgtcccgaattagttgccttagatttgt 58
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 126 gacaagtaattcggaacggagggagtag 153
||||||||||||||||||||||| ||||
Sbjct: 85 gacaagtaattcggaacggagggcgtag 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 30 ccctccgttccgaattacttgtc 52
|||||||||||||||||||||||
Sbjct: 107 ccctccgttccgaattacttgtc 85
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 97 tagatacattcgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
||||||||| ||| | ||||||||| |||| ||| || || |||||||||||||||
Sbjct: 60 tagatacatccgtgtttagacaaattcaagtcaactattttggaacggagggagta 5
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagata 69
|||||||||||| | || | |||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaattcttgtcttagatttgtctagata 48
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 96 ctagatacattcgtatctagacaaatccaagacaag 131
|||||||||||| ||| |||||||||| ||||||||
Sbjct: 61 ctagatacattcatatttagacaaatctaagacaag 26
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 25 gtactccctccgttccgaattacttgtc 52
||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgttcggaattacttgtc 31
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtc 52
|||||||||||||| ||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtc 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 126 gacaagtaattcggaacggagggagta 152
|||||||||||| ||||||||||||||
Sbjct: 85 gacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 47 cttgtcttagatttgtctagatacacaggtatctagcactaaa 89
|||||||||||||| ||||||||| | ||||||| |||||||
Sbjct: 79 cttgtcttagatttatctagatacggatgtatctaacactaaa 37
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 caagtactccctccgttccgaattacttgtc 52
||||||||||||||||||| || ||||||||
Sbjct: 1 caagtactccctccgttcctaaatacttgtc 31
>RF00906;MIR1122;AY963808.1/8398-8494 4565:Triticum aestivum
(bread wheat)
Length = 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 aagtactccctccgttccgaattacttgtc 52
|||||||||||||||||| ||||||||||
Sbjct: 2 aagtactccctccgttccatattacttgtc 31
>RF00906;MIR1122;FJ394375.1/382-487 4568:Triticum monococcum
Length = 106
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagataca 71
|||||||||| | |||| ||| ||| |||| |||||||||||||||
Sbjct: 102 tactccctccatcccgatttagttgccttatatttgtctagataca 57
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 85/106 (80%)
Strand = Plus / Minus
Query: 47 cttgtcttagatttgtctagatacacaggtatctagcactaaaattagtctagatacatt 106
||||||||| |||||| ||||||| | ||||||| ||||||||| ||| ||||||
Sbjct: 110 cttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaactacatacatc 51
Query: 107 cgtatctagacaaatccaagacaagtaattcggaacggagggagta 152
| ||| ||||||||| ||||||| | || || ||||||||||||
Sbjct: 50 catatttagacaaatttaagacaacaattttgggacggagggagta 5
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 25 gtactccctccgttccgaattacttgtctt 54
|||||||||||||||| || ||||||||||
Sbjct: 101 gtactccctccgttcctaaatacttgtctt 72
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 96 ctagatacattcgtatctagacaaat 121
||||||||||||||||||| ||||||
Sbjct: 61 ctagatacattcgtatctaaacaaat 36
>RF00906;MIR1122;AY083682.1/10279-10145 4498:Avena sativa (oat)
Length = 135
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 26 tactccctccgttccgaattacttgtcttagatttgtctagatacacaggtatc 79
||||||||||||||| | ||| || | ||||||||||||||||||| |||||
Sbjct: 131 tactccctccgttccaacttaaatgacgcagatttgtctagatacacatgtatc 78
