miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
          Length = 115

 Score =  145 bits (73), Expect = 2e-34
 Identities = 94/101 (93%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 104 tccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagttctagata 45

                                                    
Query: 76  catccatttttgagacaagtaattccgaacggagggagtac 116
           ||||||| |  |||||||||||||||||| |||||||||||
Sbjct: 44  catccatatccgagacaagtaattccgaatggagggagtac 4



 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatc 79
           ||||||||||||||||  ||| ||| |||||||||||  ||   ||  ||||||||||| 
Sbjct: 16  ttcggaattacttgtctcggatatggatgtatctagaactaaaatacatctagatacatt 75

                                               
Query: 80  catttttgagacaagtaattccgaacggagggagta 115
           ||||| || ||||||||||||| |||||| ||||||
Sbjct: 76  catttctgcgacaagtaattccaaacggatggagta 111




>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
          Length = 115

 Score =  143 bits (72), Expect = 6e-34
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||
Sbjct: 104 tccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagttctagata 45

                                                   
Query: 76  catccatttttgagacaagtaattccgaacggagggagta 115
            ||||||||| |||||||||||||||||||||||||||||
Sbjct: 44  gatccattttcgagacaagtaattccgaacggagggagta 5



 Score = 99.6 bits (50), Expect = 8e-21
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||||||||||||||||  | ||||| || ||||||||  ||   ||  ||||||||
Sbjct: 12  tccgttcggaattacttgtctcgaaaatggatctatctagaactaaaatacgtctagata 71

                                                     
Query: 76  catccatttttgagacaagtaattccgaacggagggagtact 117
           ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 72  catccatttctgagacaagtaattccgaacggagggagtact 113




>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
           subsp. durum (durum wheat)
          Length = 115

 Score =  137 bits (69), Expect = 4e-32
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||| |||||||||||||   ||||| |||||||||||  |||||||||||||||||
Sbjct: 104 tccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagttctagata 45

                                                    
Query: 76  catccatttttgagacaagtaattccgaacggagggagtac 116
           ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 44  catccatttttgagacaagtaattcggaacggagggagtac 4



 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           |||||||||||||||||||  |||||||||||| ||||||||||||||
Sbjct: 64  tctagatacatccattttttcgacaagtaattcagaacggagggagta 111




>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
          Length = 115

 Score =  131 bits (66), Expect = 2e-30
 Identities = 75/78 (96%)
 Strand = Plus / Minus

                                                                       
Query: 39  gaaatgaatgtatctagatgtattttagttctagatacatccatttttgagacaagtaat 98
           |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||
Sbjct: 81  gaaatgaatgtatctagatgtattttagttatagatacatccatttttatgacaagtaat 22

                             
Query: 99  tccgaacggagggagtac 116
           ||||||||||||||||||
Sbjct: 21  tccgaacggagggagtac 4



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 81/100 (81%)
 Strand = Plus / Plus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           |||||||||||||||||||| |  ||||| ||||||||| |  ||   ||  ||||||||
Sbjct: 12  tccgttcggaattacttgtcataaaaatggatgtatctataactaaaatacatctagata 71

                                                   
Query: 76  catccatttttgagacaagtaattccgaacggagggagta 115
           ||| ||||| |  ||| ||||||| ||||| |||||||||
Sbjct: 72  cattcatttcttggacgagtaatttcgaacagagggagta 111




>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
           wheat)
          Length = 115

 Score =  127 bits (64), Expect = 4e-29
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||||
Sbjct: 104 tccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagttctagata 45

                                           
Query: 76  catccatttttgagacaagtaattccgaacgg 107
           |||| ||||| ||||||| |||||||||||||
Sbjct: 44  catctattttcgagacaaataattccgaacgg 13



 Score = 79.8 bits (40), Expect = 8e-15
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           |||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 64  tctagatacatccattttcgcgacaagtaattccgaacggagggagta 111




>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
           (bread wheat)
          Length = 115

 Score =  113 bits (57), Expect = 5e-25
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           |||||||||||||||||||||| |||||| |||||||||||  | ||| |||||||||||
Sbjct: 12  tccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttctagata 71

                                            
Query: 76  catccatttttgagacaagtaattccgaacgga 108
           ||||||||| || |||||||||||| |||||||
Sbjct: 72  catccatttatgcgacaagtaattcggaacgga 104



 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggaggga 112
           ||||||||||||||||| |  ||||||||||||||||||||||||
Sbjct: 52  tctagatacatccatttctacgacaagtaattccgaacggaggga 8




>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
          Length = 115

 Score =  107 bits (54), Expect = 3e-23
 Identities = 87/98 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||| |||||||| ||||  |||||| ||||||||||||||||||||||| ||||||
Sbjct: 12  tccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttagttttagata 71

                                                 
Query: 76  catccatttttgagacaagtaattccgaacggagggag 113
            |||||||| |||||| |||||||  ||||||||||||
Sbjct: 72  tatccatttctgagacgagtaatttggaacggagggag 109



 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||||||||||| || ||| |||||||| ||||||||||||||
Sbjct: 52  tctagatacatccatttctgcgacgagtaattcagaacggagggagta 5




>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
           wheat)
          Length = 123

 Score =  103 bits (52), Expect = 5e-22
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                       
Query: 20  ttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatc 79
           |||||||||||||||||  |||||| ||||||||||| |  |||||||||||||||||| 
Sbjct: 24  ttcggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacatt 83

                                               
Query: 80  catttttgagacaagtaattccgaacggagggagta 115
           |||||| || |||||||||||||||  |||||||||
Sbjct: 84  cattttcgaaacaagtaattccgaatagagggagta 119



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 68  tctagatacatccatttttgagacaagtaattccgaa 104
           ||||||||||||||||| || ||||||||||||||||
Sbjct: 60  tctagatacatccatttctgcgacaagtaattccgaa 24




>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
          wheat)
          Length = 125

 Score =  101 bits (51), Expect = 2e-21
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                      
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
          ||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 12 tccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctagata 71

                     
Query: 76 catccattttt 86
          |||||||||||
Sbjct: 72 catccattttt 82



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtactac 119
           ||||||||||||||||     |||||||| ||||| ||||||||||||||||
Sbjct: 52  tctagatacatccattcccccgacaagtatttccggacggagggagtactac 1




>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
           wheat)
          Length = 125

 Score =  101 bits (51), Expect = 2e-21
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||| ||||| ||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 114 tccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctagata 55

                      
Query: 76  catccattttt 86
           |||||||||||
Sbjct: 54  catccattttt 44




>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 114

 Score = 99.6 bits (50), Expect = 8e-21
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 28  tacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatccatttttg 87
           ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| | 
Sbjct: 24  tacttgtcgcggaaatggatgtatctagatgtatttcagttctagatacatccatttcta 83

                         
Query: 88  agacaagtaattcc 101
            |||||||||||||
Sbjct: 84  cgacaagtaattcc 97



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 23  ggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatccat 82
           ||||||||||||||| |||||| |||||||||||  |    ||  |||||||||||||||
Sbjct: 97  ggaattacttgtcgtagaaatggatgtatctagaactgaaatacatctagatacatccat 38

                                              
Query: 83  ttttgagacaagtaattccgaacggagggagtact 117
           ||  | |||||||| ||| | || |||||||||||
Sbjct: 37  ttccgcgacaagtatttcgggacagagggagtact 3




>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
          Length = 115

 Score = 97.6 bits (49), Expect = 3e-20
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                       
Query: 40  aaatgaatgtatctagatgtattttagttctagatacatccatttttgagacaagtaatt 99
           ||||| ||||||||||||||||||||||| ||||||||||||||| || ||| |||||||
Sbjct: 36  aaatggatgtatctagatgtattttagttatagatacatccatttctgcgacgagtaatt 95

                            
Query: 100 ccgaacggagggagtac 116
             |||||||||||||||
Sbjct: 96  tggaacggagggagtac 112



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggaggga 112
           ||||||||||||||||| |  ||| |||||||| |||||||||||
Sbjct: 52  tctagatacatccatttattggacgagtaattcggaacggaggga 8




>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
           wheat)
          Length = 115

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                       
Query: 28  tacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatccatttttg 87
           |||||||| | |||||| || ||||||||||||||||||||||||| |||||||||||  
Sbjct: 92  tacttgtcattgaaatggatatatctagatgtattttagttctagacacatccattttga 33

                                       
Query: 88  agacaagtaattccgaacggagggagta 115
            |||||||||||| | ||||||||||||
Sbjct: 32  tgacaagtaattctggacggagggagta 5




>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
          Length = 115

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           |||||||||||||| |||||| | ||||  || ||||||||||||||||||||||| |||
Sbjct: 104 tccgttcggaattaattgtcgcgaaaatagatatatctagatgtattttagttctaaata 45

                                              
Query: 76  catccatttttgagacaagtaattccgaacggagg 110
           | |||||||  |||||| |||||||| ||||||||
Sbjct: 44  cgtccatttccgagacaggtaattccaaacggagg 10



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtacta 118
           |||||||| ||| ||||| | ||||| ||||||||||||||||| ||||||
Sbjct: 64  tctagatatatctattttcgcgacaattaattccgaacggagggggtacta 114




>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
           (bread wheat)
          Length = 125

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||| ||||| |||||||||  ||||||||| ||||||||||||||||| |||||||||
Sbjct: 114 tccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaattctagata 55

                      
Query: 76  catccattttt 86
           |||||||||||
Sbjct: 54  catccattttt 44




>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
           (bread wheat)
          Length = 114

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 46  atgtatctagatgtattttagttctagatacatccatttttgagacaagtaattccgaac 105
           |||||||||||||||||||||||||||||||||||||||  | ||| |||||||  ||||
Sbjct: 41  atgtatctagatgtattttagttctagatacatccatttcagcgacgagtaatttggaac 100

                     
Query: 106 ggagggagta 115
           ||||||||||
Sbjct: 101 ggagggagta 110



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                            
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtac 116
           ||||||||||||||| | |||||||||||| || |||||||||| ||||
Sbjct: 51  tctagatacatccatatgtgagacaagtaa-tcggaacggagggggtac 4




>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 125

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 17 ccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatac 76
          |||| ||||| |||||||| | | |||| |||||||||||||||||||||||||||||||
Sbjct: 13 ccgtccggaaatacttgtcataggaatggatgtatctagatgtattttagttctagatac 72

                    
Query: 77 atccattttt 86
          ||||||||||
Sbjct: 73 atccattttt 82




>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
          Length = 125

 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||| |||||||| ||||| | |||||| ||||||||||| ||||||||||||||||||
Sbjct: 114 tccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagttctagata 55

                    
Query: 76  catccattt 84
           |||||||||
Sbjct: 54  catccattt 46



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||||||||||| |  ||||| |||||||| ||||||||||||
Sbjct: 74  tctagatacatccatttctatgacaaataattccggacggagggagta 121




>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
           wheat)
          Length = 125

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||| |||||||| |||   ||||||||||||||||||||||||||| || ||||||
Sbjct: 114 tccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaattgtagata 55

                      
Query: 76  catccattttt 86
           |||||||||||
Sbjct: 54  catccattttt 44



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||||| ||||| |  ||| |||||||| ||||||||||||||
Sbjct: 74  tctagatacattcatttcttggacgagtaattctgaacggagggagta 121




>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
          Length = 125

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                      
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
          ||||| || ||||| ||||||  |||||| ||||||||||| ||||||||||||||||||
Sbjct: 12 tccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagttctagata 71

                     
Query: 76 catccattttt 86
          |||||||||||
Sbjct: 72 catccattttt 82



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||||||||||| |  ||||| ||||| || ||||||||||||
Sbjct: 52  tctagatacatccatttctccgacaaataatttcggacggagggagta 5




>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
          Length = 115

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||| |||||||||||||     ||| ||||||||||||||||||||||||||||||
Sbjct: 104 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagata 45

                    
Query: 76  catccattt 84
           |||||||||
Sbjct: 44  catccattt 36



 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtactac 119
           |||||||||||||||   || |||||||||||| ||||||||||||||||||
Sbjct: 64  tctagatacatccatacgtgcgacaagtaattcggaacggagggagtactac 115




>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
           wheat)
          Length = 115

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||| |||||||||||||     ||| ||||||| ||||||||||||||||||||||
Sbjct: 104 tccgttccgaattacttgtcgcacttatggatgtatcaagatgtattttagttctagata 45

                     
Query: 76  catccatttt 85
           ||||||||||
Sbjct: 44  catccatttt 35




>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 125

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                        
Query: 41 aatgaatgtatctagatgtattttagttctagatacatccattttt 86
          |||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 37 aatggatgtatctagatgtattttagttctagatatatccattttt 82




>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
          Length = 124

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                      
Query: 18 cgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagataca 77
          ||||||||  ||||||||   |||||| ||||||||||| |||||||| |||||||||||
Sbjct: 14 cgttcggatatacttgtcagagaaatggatgtatctagacgtattttacttctagataca 73

                   
Query: 78 tccattttt 86
          |||||||||
Sbjct: 74 tccattttt 82




>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
          Length = 125

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 47 tgtatctagatgtattttagttctagatacatccattttt 86
          |||||||||||||||||||||||||||||||| |||||||
Sbjct: 43 tgtatctagatgtattttagttctagatacattcattttt 82




>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
          Length = 125

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 41 aatgaatgtatctagatgtattttagttctagatacatccattt 84
          |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 37 aatggatgtatctagatgtattttagttatagatacatccattt 80



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           |||||||||||||||| ||  |||||||| ||||| ||| ||||||||
Sbjct: 52  tctagatacatccattctttggacaagtatttccggacgaagggagta 5




>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 124

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||||||||| |||||||| |  |||||||||||||||||  |||||||||| ||||||
Sbjct: 113 tccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagttatagata 54

               
Query: 76  catc 79
           ||||
Sbjct: 53  catc 50



 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||||| |||||||  |||||||| ||||||||||||||||||
Sbjct: 73  tctagatacattcatttttaggacaagtatttccgaacggagggagta 120




>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
          (bread wheat)
          Length = 124

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                         
Query: 40 aaatgaatgtatctagatgtattttagttctagatacatccattttt 86
          |||||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 90 aaatgaatgtatttagacgtattttagttctacatacatccattttt 44




>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 124

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                       
Query: 7   tgtactctttccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttag 66
           |||||||  ||||| ||||| |||||||| | || |||||||||||||||  ||||||||
Sbjct: 122 tgtactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttag 63

                          
Query: 67  ttctagatacatcca 81
           || ||||||||||||
Sbjct: 62  ttatagatacatcca 48




>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
          Length = 125

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 28  tacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatccattttt 86
           |||||||| | | |||| ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 102 tacttgtcataggaatgtatgtatctagatgtattataattctagatacatccattttt 44




>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
          wheat)
          Length = 112

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                
Query: 46 atgtatctagatgtattttagttctagatacatccatttttgagacaagtaatt 99
          |||||||||| |||||||||||||||||||||| ||||| || ||| |||||||
Sbjct: 42 atgtatctagttgtattttagttctagatacattcatttctgcgacgagtaatt 95




>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
          wheat)
          Length = 115

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                            
Query: 45 aatgtatctagatgtattttagttctagatacat 78
          ||||||||||||||||||||||||||||||||||
Sbjct: 80 aatgtatctagatgtattttagttctagatacat 47




>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
          Length = 125

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                        
Query: 41 aatgaatgtatctagatgtattttagttctagatacatccattttt 86
          |||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 89 aatggatgtacctagacgtattttagttctagatacatccattttt 44




>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
          Length = 135

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                    
Query: 46 atgtatctagatgtattttagttctagatacatccatttttg 87
          |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 84 atgtatctagatgtattttagttctaaatacatccctttttg 43




>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 125

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                        
Query: 41 aatgaatgtatctagatgtattttagttctagatacatccattttt 86
          |||| |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 89 aatgtatgtatctagatatattttagttctagatacattcattttt 44




>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
          Length = 136

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                           
Query: 46 atgtatctagatgtattttagttctagatacat 78
          |||||||||||||||||||||||||||||||||
Sbjct: 84 atgtatctagatgtattttagttctagatacat 52



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 77  atccatttttgagacaagtaattccgaacggagggagta 115
           ||||||||| | |||||||| ||||| ||||||||||||
Sbjct: 94  atccattttggtgacaagtatttccggacggagggagta 132




>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
           subsp. durum (durum wheat)
          Length = 115

 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 9   tactctttccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagtt 68
           |||||| ||||||  |||||| ||||| | |  |||||||||||||||| ||||||| ||
Sbjct: 111 tactctctccgtttcgaattatttgtcataggtatgaatgtatctagatttattttaatt 52

                           
Query: 69  ctagatacatccattt 84
           |||||||||| |||||
Sbjct: 51  ctagatacattcattt 36




>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
          (bread wheat)
          Length = 135

 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                          
Query: 46 atgtatctagatgtattttagttctagataca 77
          ||||||||||||||||||||||||||||||||
Sbjct: 84 atgtatctagatgtattttagttctagataca 53




>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
          Length = 126

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                         
Query: 54 agatgtattttagttctagatacatccattt 84
          |||||||||||||||||||||||||||||||
Sbjct: 76 agatgtattttagttctagatacatccattt 46



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 77  atccatttttgagacaagtaattccgaacggagggagtactac 119
           |||||||| || |||||||| ||||| ||||||||||||||||
Sbjct: 43  atccatttctgcgacaagtatttccggacggagggagtactac 1




>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 117

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtacta 118
           |||||||||||||||||||| | |||||||||||| || |||||| |||||
Sbjct: 66  tctagatacatccatttttgcggcaagtaattccggacagagggaatacta 116



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 56/64 (87%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 22  cggaattacttgtcgtggaaatgaatgtatctagatgtatttt-agttctagatacatcc 80
           |||||||||||| ||   ||||| ||||||||||| | ||||| ||||||||||||||||
Sbjct: 100 cggaattacttgccgcaaaaatggatgtatctagacgcatttttagttctagatacatcc 41

               
Query: 81  attt 84
           ||||
Sbjct: 40  attt 37




>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
          Length = 147

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                      
Query: 18 cgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagataca 77
          ||||| ||||||||||||   || |||||| ||| || |||||||||||||||||||| |
Sbjct: 14 cgttccgaattacttgtcacagatatgaatatatataaatgtattttagttctagatata 73

                                
Query: 78 tccatttttgagacaagtaatt 99
          | ||||| || ||| |||||||
Sbjct: 74 ttcatttctgcgacgagtaatt 95



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 71  agatacatccatttttgagacaagtaattccgaacggagggagtac 116
           ||||||||||||   || |||||||||||| |||||||||||||||
Sbjct: 99  agatacatccatacctgcgacaagtaattcggaacggagggagtac 144




>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
          subsp. aegilopoides
          Length = 146

 Score = 60.0 bits (30), Expect = 7e-09
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 46 atgtatctagatgtattttagttctagatacatc 79
          |||||||||||||||||||||||||| |||||||
Sbjct: 63 atgtatctagatgtattttagttctacatacatc 96




>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
          Length = 125

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                      
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
          ||||||||||| |||||||  | || |||||||||||||||| ||||||| || ||||||
Sbjct: 12 tccgttcggaaatacttgttttagagatgaatgtatctagatttattttaattatagata 71

           
Query: 76 c 76
          |
Sbjct: 72 c 72




>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
          Length = 135

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                           
Query: 46 atgtatctagatgtattttagttctagatacat 78
          |||||||||||||||||||| ||||||||||||
Sbjct: 84 atgtatctagatgtattttaattctagatacat 52




>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
          (bread wheat)
          Length = 135

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                              
Query: 44 gaatgtatctagatgtattttagttctagatacatc 79
          |||||||| |||||||||||||||||||| ||||||
Sbjct: 86 gaatgtatatagatgtattttagttctaggtacatc 51




>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
          wheat)
          Length = 124

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 46 atgtatctagatgtattttagttctagatacatccatttt 85
          ||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 42 atgtatctagacgtattttagttctaaatacattcatttt 81



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 68  tctagatacatccatttttgagacaagtaattccgaacggagggagtac 116
           |||||||||||| |||| | ||||||||| || || |||||||||||||
Sbjct: 52  tctagatacatcaatttctcagacaagtattttcggacggagggagtac 4




>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
          Length = 135

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                              
Query: 44 gaatgtatctagatgtattttagttctagatacatc 79
          |||||||||||||| |||||||||||||| ||||||
Sbjct: 86 gaatgtatctagatatattttagttctaggtacatc 51




>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
          Length = 125

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                      
Query: 41 aatgaatgtatctagatgtattttagttctagatacatccattt 84
          |||| ||||||||||||| |||||||||||| |||||| |||||
Sbjct: 89 aatggatgtatctagatgcattttagttctaaatacattcattt 46



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 77  atccatttttgagacaagtaattccgaacggagg 110
           ||||||||||| || ||||||||||| |||||||
Sbjct: 43  atccatttttgcgataagtaattccggacggagg 10




>RF00906;MIR1122;AY663392.1/105130-105016 4565:Triticum aestivum
           (bread wheat)
          Length = 115

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 47  tgtatctagatgtattttagttctagatacatccatttttgagacaagtaattccgaacg 106
           ||||||||||  | ||||| ||||||||| |  ||||||| ||||||||  ||| |||||
Sbjct: 43  tgtatctagacttgttttaattctagatataatcatttttaagacaagtgtttctgaacg 102

                      
Query: 107 gagggagtact 117
           |||||||||||
Sbjct: 103 gagggagtact 113




>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
          Length = 115

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                 
Query: 46 atgtatctagatgtattttagttctagatacatccattt 84
          ||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 74 atgtatctagacgtatttcagtgctagatacatccattt 36




>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 123

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 17  ccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatac 76
           |||| ||||| ||| |||| | ||||||||||||||||||  |||||||||| || ||||
Sbjct: 111 ccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagttatacatac 52

              
Query: 77  atc 79
           |||
Sbjct: 51  atc 49




>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 124

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 17  ccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatac 76
           |||| ||||| |||||||| |  | ||||||||||||| || |||||||||| | |||||
Sbjct: 112 ccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagttatggatac 53

                  
Query: 77  atccatt 83
           |||||||
Sbjct: 52  atccatt 46




>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
          wheat)
          Length = 134

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 46 atgtatctagatgtattttagttctagata 75
          |||||| |||||||||||||||||||||||
Sbjct: 51 atgtatttagatgtattttagttctagata 80




>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
          (bread wheat)
          Length = 135

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 46 atgtatctagatgtattttagttctagatacatc 79
          |||||||||||  |||||||||||||||||||||
Sbjct: 52 atgtatctagacatattttagttctagatacatc 85




>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 121

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 70  tagatacatccatttttgagacaagtaattccgaacggagggagta 115
           ||||| |||||||||||  | |||||||||||| ||||||||||||
Sbjct: 50  tagatgcatccatttttatgtcaagtaattccggacggagggagta 5



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 78  tccatttttgagacaagtaattccgaacggagggagta 115
           |||||||| | |||||||||||||| ||||||||||||
Sbjct: 84  tccattttggtgacaagtaattccggacggagggagta 121




>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 124

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                    
Query: 42 atgaatgtatctagatgtattttagttctagatacatccatt 83
          |||||| ||||||||  |||||||||| ||||||||||||||
Sbjct: 87 atgaatatatctagacttattttagttatagatacatccatt 46



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 80  catttttgagacaagtaattccgaacggagggagtact 117
           ||||| || |||||||| ||||| ||||||||||||||
Sbjct: 40  catttctgggacaagtatttccggacggagggagtact 3



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 90  acaagtaattccgaacggagggagtactac 119
           ||||||| ||||| ||||||||||||||||
Sbjct: 95  acaagtatttccggacggagggagtactac 124




>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
          Length = 135

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 88  agacaagtaattccgaacggagggagtac 116
           ||||||||||||| |||||||||||||||
Sbjct: 32  agacaagtaattcagaacggagggagtac 4




>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
          (bread wheat)
          Length = 135

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                   
Query: 46 atgtatctagatgtattttagttctagatacatccattttt 86
          |||||||||||||||| |||||| |||||| |||| |||||
Sbjct: 52 atgtatctagatgtatattagttttagatatatcctttttt 92




>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
          Length = 135

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 88  agacaagtaattccgaacggagggagta 115
           ||||||||||||| ||||||||||||||
Sbjct: 32  agacaagtaattcggaacggagggagta 5




>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
           (bread wheat)
          Length = 125

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 80  catttttgagacaagtaattccgaacggagggagta 115
           |||||||| |||||||| ||| ||||||||||||||
Sbjct: 86  catttttgcgacaagtatttctgaacggagggagta 121




>RF00906;MIR1122;DQ257569.1/307-193 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 115

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                  
Query: 40 aaatgaatgtatctagatgtattttagttctagatacatc 79
          ||||||| ||||||||||||||||  || |||||||||||
Sbjct: 80 aaatgaaagtatctagatgtatttcggtgctagatacatc 41




>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
          Length = 124

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                      
Query: 40 aaatgaatgtatctagatgtattttagttctagatacatccatt 83
          ||||| ||| |||||||  |||||||||| ||||||||||||||
Sbjct: 36 aaatggatgaatctagacttattttagttatagatacatccatt 79




>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 124

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 46 atgtatctagatgtattttagttctagatacatccatttt 85
          |||||||||||  ||||||| || ||||||||||||||||
Sbjct: 42 atgtatctagacttattttacttatagatacatccatttt 81



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 80  catttttgagacaagtaattccgaacggagggagtacta 118
           |||||||  |||||||| ||||| |||||||||||||||
Sbjct: 85  catttttatgacaagtatttccggacggagggagtacta 123




>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
          Length = 124

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 16  tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
           ||||| ||||| |||||||| |  | |||||||||||||||  |||| || || ||||||
Sbjct: 113 tccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaattgtagata 54

                   
Query: 76  catccatt 83
           ||||||||
Sbjct: 53  catccatt 46




>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
          Length = 122

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 70  tagatacatccatttttgagacaagtaattccgaacggagggagtac 116
           |||||||||| ||||||  |||||||||||||| |  ||||||||||
Sbjct: 73  tagatacatctatttttatgacaagtaattccggagagagggagtac 119




>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
          wheat)
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 61 ttttagttctagatacatccattttt 86
          |||||||||||||||||| |||||||
Sbjct: 68 ttttagttctagatacattcattttt 43




>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
          distachyon
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                    
Query: 46 atgtatctagatgtattttagt-tctagatacatccattttt 86
          ||||||||||| |||||||||| | ||||||| |||||||||
Sbjct: 42 atgtatctagacgtattttagtatatagatacgtccattttt 83




>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
          distachyon
          Length = 124

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                    
Query: 46 atgtatctagatgtattttagttctagatacatccatttttg 87
          |||||||||||||  |||||| | ||||||||||||| ||||
Sbjct: 83 atgtatctagatgctttttaggtatagatacatccatatttg 42