miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 157 bits (79), Expect = 5e-38
Identities = 107/115 (93%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 12 tccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaacta 71
|||||||||||| ||||||| |||| |||||||||||||||||||||| |||||||| ||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgt-atctacaatta 66
Query: 72 aaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 67 aaatacatctagatacattcatttcttggacgagtaattctgaacggagggagta 121
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 113 bits (57), Expect = 6e-25
Identities = 102/119 (85%), Gaps = 11/119 (9%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
|||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 4 gtactccctccgttcggaattacttgtcataaaaatggatg-----------tatctata 52
Query: 68 actaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
|||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 53 actaaaatacatctagatacattcatttcttggacgagtaatttcgaacagagggagta 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 81 tagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||||||| ||||| | ||| |||||||||||||||||||||||
Sbjct: 50 tagatacatccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 101 bits (51), Expect = 2e-21
Identities = 103/119 (86%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
||||||||| || |||||||||||||| | ||||||||||||||||||| |||||| ||
Sbjct: 5 tactccctctgtccggaattacttgtcgcataaatggataaaaatggatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
|||| ||||||||||| |||||||||| ||| |||| ||||| |||||||||||||
Sbjct: 64 ttaaaatacatctagatagattcatttctccgacaagtatttccggacggagggagtat 122
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 93.7 bits (47), Expect = 6e-19
Identities = 102/119 (85%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||| | |||||||||||||| ||||||| ||| |||||||||| ||||| ||
Sbjct: 121 tactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgt-atctataa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
||||| |||||||||||||| |||| |||||| |||| ||||| ||| |||||||||
Sbjct: 62 ctaaaatacatctagatacatccattctttggacaagtatttccggacgaagggagtat 4
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 93.7 bits (47), Expect = 6e-19
Identities = 102/119 (85%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| ||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggat-atatctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
||||| |||||||||||||| |||| || ||| | || ||||| || ||||||||||
Sbjct: 62 ctaaaatacatctagatacatccattcctatgacaaatatttccggacagagggagtat 4
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 93.7 bits (47), Expect = 6e-19
Identities = 102/119 (85%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||| |||||||| | |||||||| | |||||||||| ||||| ||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgt-atctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
||||| || ||||||||||| ||||||| ||| | |||||||| |||||||||||||
Sbjct: 64 ctaaaatacgtctagatacatccatttctatgacaaataattccggacggagggagtat 122
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggat 47
|||||||||||| |||||||| |||||||| ||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggat 83
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 85.7 bits (43), Expect = 1e-16
Identities = 101/119 (84%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||| ||||||| | |||||||||||||||||||| ||||| ||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgt-atctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
||||| || ||||||||||| ||||||| ||| | ||||| || |||||||||||||
Sbjct: 62 ctaaaatacgtctagatacatccatttctccgacaaataatttcggacggagggagtat 4
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 83.8 bits (42), Expect = 5e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 50 aaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaat 109
|||||||||| ||||| ||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 80 aaatggatgt-atctataactaaaatacatctagatacatccatttattggacgagtaat 22
Query: 110 tccgaacggaggga 123
|| |||||||||||
Sbjct: 21 tcggaacggaggga 8
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 81 tagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 66 tagatacatccatttctgcgacgagtaatttggaacggagggagta 111
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 83.8 bits (42), Expect = 5e-16
Identities = 101/118 (85%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||| |||||||| ||||||||||| | | |||||| |||||| ||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggat-atattggatg-tatctataa 62
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||| | ||||||||||||||| ||| |||| |||| ||||| ||||||||||||
Sbjct: 63 ctaaaataagtctagatacattcatctctaggacaagtatttccggacggagggagta 120
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 79.8 bits (40), Expect = 8e-15
Identities = 101/120 (84%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| | || |||||||| || ||||| ||||||||||||| |||||| ||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtatt 128
||||| |||||||||||||| |||| | ||| |||| ||||| ||||||||||||||
Sbjct: 64 ctaaaatacatctagatacatccattcccccgacaagtatttccggacggagggagtatt 123
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|||||| ||||||| |||||||||||||| ||||||| |||||||||||| |||||||
Sbjct: 71 tatctaaaactaaaatacatctagatacatccatttctgcgacgagtaattcagaacgga 12
Query: 120 gggagta 126
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| | || |||||||| || ||||| ||||||||||||| |||||| ||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||| |||||||||||||| |||| | ||| |||| ||||| ||||||||||||
Sbjct: 62 ctaaaatacatctagatacatccattcccccgacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 75/86 (87%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||||||||||||| | ||||| ||||||||||||| |||||| ||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatt 94
|| | |||||||||||||| ||||
Sbjct: 64 ttataatacatctagatacatacatt 89
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 73.8 bits (37), Expect = 5e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
|||||||||| || || || |||||||||| |||||||||||||||| ||| |||||| |
Sbjct: 122 gtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatg-tatctaga 64
Query: 68 actaaaccacatctagataca 88
|||||| |||||||||||||
Sbjct: 63 actaaaatacatctagataca 43
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 73.8 bits (37), Expect = 5e-13
Identities = 98/117 (83%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 10 actccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaac 69
|||||||| || | |||||||||||| | |||| ||||||||||||||| ||||| |||
Sbjct: 120 actccctctgtccagaattacttgtcgcataaattgataaaaatggatgt-atctagaac 62
Query: 70 taaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
|||| |||||||||||||| |||| || ||| |||| ||||| |||| |||||||
Sbjct: 61 taaaatacatctagatacatccattcctatgacaagtatttccggacggcgggagta 5
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 101/120 (84%), Gaps = 2/120 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
||||||||||||| ||||| |||||||| | ||||||||| ||||||||| |||||| |
Sbjct: 4 gtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatg-tatctaga 62
Query: 68 actaaaccacatc-tagatacattcatttcttggacgagtaattccgaacggagggagta 126
|||||| ||||| | ||||||| |||| || |||| |||| || || ||||||||||||
Sbjct: 63 actaaaatacatctttgatacatccattcctcggacaagtattttcggacggagggagta 122
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|||||| ||||||| |||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 45 tatctagaactaaaatacatctagatacattcatttctgcgacaagtaattccaaacgga 104
Query: 120 gggagta 126
||||||
Sbjct: 105 tggagta 111
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|||||| ||||||| || ||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 45 tatctagaactaaaatacgtctagatacatccatttctgagacaagtaattccgaacgga 104
Query: 120 gggagta 126
|||||||
Sbjct: 105 gggagta 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtc 35
||||||||||||||||||||||||||||
Sbjct: 112 gtactccctccgttcggaattacttgtc 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 104 agtaattccgaacggagggagta 126
|||||||||||||||||||||||
Sbjct: 27 agtaattccgaacggagggagta 5
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 67.9 bits (34), Expect = 3e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
||||||||||||| || || |||||||||| |||||||| ||||| ||||| ||| || |
Sbjct: 4 gtactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatg-tatttaga 62
Query: 68 actaaaccacatctagatacat 89
|||||| ||||||||||||||
Sbjct: 63 actaaaatacatctagatacat 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 7 tgtactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||||||||||||| ||||| |||||||||| |||||| ||||||
Sbjct: 133 tgtactccctccgtccggaaatacttgtcatcaaaatgaataaaa 89
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 67.9 bits (34), Expect = 3e-11
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| | ||| |||||||| || ||||| ||| || | ||||| ||||| ||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaatataa-tagatgt-atctataa 62
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||| | ||||||||||||||||| | |||| |||| ||||||||||||||||||
Sbjct: 63 ctaaaataagtctagatacattcatttttaggacaagtatttccgaacggagggagta 120
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatg 44
|||||||||||||||||| |||||||| ||||||||
Sbjct: 120 tactccctccgttcggaaatacttgtcctaaaaatg 85
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
|||||||||||||||| || |||||||||| ||||||||||| || ||| |||||| |
Sbjct: 4 gtactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatg-tatctaga 62
Query: 68 actaaaccacatctagatacat 89
|||||| ||||||||||||||
Sbjct: 63 actaaaatacatctagatacat 84
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||||||||||| ||||| ||||||||| |||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtcaccaaaatggataaaa 90
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaa 51
||||||||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 121 gtactccctccgtccggaaatacttgtcataaaaatgtataaaa 78
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 48 aaaaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagta 107
|||||||||||| ||||| ||||||| | ||||||||||| ||||| || ||| ||||
Sbjct: 34 aaaaatggatgt-atctagaactaaaatatgtctagatacatccattttttcgacaagta 92
Query: 108 attccgaacggagggagta 126
|||| ||||||||||||||
Sbjct: 93 attcagaacggagggagta 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggat 47
||||||||||||||| |||||||||||| ||||||||||
Sbjct: 4 gtactccctccgttccgaattacttgtctcaaaaatggat 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggat 47
|||||||||||||| |||||||||||| ||||||||||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggat 73
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||||||||| ||||| | ||| |||||||| ||||||||||||||
Sbjct: 52 tctagatacatccatttttgagacaagtaattcggaacggagggagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||||||||||| ||||| |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaa 47
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggat 47
|||||||||||| |||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggat 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
|||||||||||| ||||||||||||||| |||||||| | ||||| ||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgt 71
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| | ||| |||||||| | ||||| ||||||||||||| |||||| ||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||| || ||||| ||||| |||| || ||| |||| ||||| || |||||||||
Sbjct: 64 ctaaaatacgtctaggtacatccattcctctgacaagtatttccggacagagggagta 121
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 7 tgtactccctccgttcggaattacttgtcataaaaatggat 47
|||| |||||||||||||||||||||||| || ||||||||
Sbjct: 3 tgtattccctccgttcggaattacttgtcgtagaaatggat 43
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacggaggga 123
||||||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 52 tctagatacatccatttctacgacaagtaattccgaacggaggga 8
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||| || ||||||| | |||||||||||| | || |||||| ||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtg-tatctagaa 63
Query: 69 ctaaaccacatctagatacat 89
||||| ||||||||||||||
Sbjct: 64 ctaaaatacatctagatacat 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||||||||||| ||||| |||||||||| || ||| ||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaataaaa 89
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 10 actccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaac 69
||||||||||||||||| |||||||| | ||||| ||||||| ||| |||||| |||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatgcctaaaaataaatg-tatctagaac 59
Query: 70 taaaccacatctagatacatt 90
|||| |||||||||||||||
Sbjct: 60 taaaatacatctagatacatt 80
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaat 53
|||||||||||| || || |||||||||| |||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaat 87
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaa 51
||||||||||||| || || |||||||||| |||||||||||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtcatcaaaatggataaaa 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||| ||||||| || || |||||||||| |||||||||||||
Sbjct: 96 tacttcctccgtccgaaaatacttgtcatcaaaatggataaaa 54
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|||||| ||||||| || ||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 45 tatctagaactaaaatacgtctagatacatccattttcgcgacaagtaattccgaacgga 104
Query: 120 gggagtat 127
||||||||
Sbjct: 105 gggagtat 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtc 35
|||||||||||||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtc 85
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 74/88 (84%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 39 aaaatggataaaaatggatgttatctacaactaaaccacatctagatacattcatttctt 98
|||||||||||||||||||| |||||| || |||| || ||||||||||| |||||||
Sbjct: 91 aaaatggataaaaatggatg-tatctagaagtaaaatacgtctagatacatccatttctc 33
Query: 99 ggacgagtaattccgaacggagggagta 126
||| |||| |||||||| ||| ||||
Sbjct: 32 tgacaagtatatccgaacgtaggcagta 5
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggat 47
|||||||||||| | |||||||||||||| |||||||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggat 43
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 54.0 bits (27), Expect = 5e-07
Identities = 97/119 (81%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||||| ||| |||||||| ||||||| ||| ||||||||| ||||| ||
Sbjct: 121 tactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatg-catctaaaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtat 127
||||| | |||| |||||| |||| || ||| |||| ||||| ||||| |||||||
Sbjct: 62 ctaaaatatgtctaaatacatccattctttcgacaagtatttccggacggaaggagtat 4
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tgtactccctccgttcggaattacttgtcataaa 40
|||||||||||||||| |||||||||||| ||||
Sbjct: 3 tgtactccctccgttctgaattacttgtcttaaa 36
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 6 ttgtactccctccgttcggaattacttgtcataaaaat 43
|||||||||||| | ||||||||||||||||||||||
Sbjct: 121 ttgtactccctctctccggaattacttgtcataaaaat 84
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||| ||||| |||||||||||||| | |||| ||||||||| ||| |||||| ||
Sbjct: 5 tactccgtccgtccggaattacttgtcgcacaaatatataaaaatgaatg-tatctagaa 63
Query: 69 ctaaaccacatctagatacattcatt 94
||||| | |||||||||||| ||||
Sbjct: 64 ctaaaatatatctagatacatacatt 89
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 28 tacttgtcataaaaatggataaaaatggatgttatctacaactaaaccacatctagatac 87
|||||||||| |||||||||||||| | ||| |||||| || |||| ||||||||||||
Sbjct: 24 tacttgtcatcaaaatggataaaaaagaatg-tatctagaattaaaatacatctagatac 82
Query: 88 at 89
||
Sbjct: 83 at 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
||||| |||||| | ||| |||||||||| |||||||||||||
Sbjct: 131 tactctctccgtccagaaatacttgtcatcaaaatggataaaa 89
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 13 ccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaactaa 72
|||||| | |||||||||||||| || |||||| |||||||| ||| |||||| ||||||
Sbjct: 8 ccctccatccggaattacttgtcgtagaaatgggtaaaaatgaatg-tatctagaactaa 66
Query: 73 a 73
|
Sbjct: 67 a 67
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tgtactccctccgttcggaattacttgtc 35
|||||||||||||||| ||||||||||||
Sbjct: 145 tgtactccctccgttccgaattacttgtc 117
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 8e-06
Identities = 68/81 (83%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| | || || ||||||| |||||||||||||| |||| |||||| ||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggat-atatctaaaa 73
Query: 69 ctaaaccacatctagatacat 89
|||| ||||||||||||||
Sbjct: 72 ctaatatacatctagatacat 52
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 68/81 (83%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 14 cctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaactaaa 73
||||||| ||||||||||| || ||||||||||| ||||| ||| ||| || |||||||
Sbjct: 10 cctccgtccggaattacttatcgcaaaaatggatagaaatgaatg-tatttagaactaaa 68
Query: 74 ccacatctagatacattcatt 94
||||||||||||| ||||
Sbjct: 69 atgcatctagatacatccatt 89
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 50 aaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaat 109
|||||||||| ||||| ||||||| |||||||||||||| ||| | ||| ||||||
Sbjct: 36 aaatggatgt-atctagaactaaaatacatctagatacatccatacgtgcgacaagtaat 94
Query: 110 tccgaacggagggagta 126
|| ||||||||||||||
Sbjct: 95 tcggaacggagggagta 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtc 35
||||||||||||||| ||||||||||||
Sbjct: 112 gtactccctccgttccgaattacttgtc 85
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 tctagatacattcatttcttggacgagtaatt 110
||||||||||||||||||| |||||||||||
Sbjct: 64 tctagatacattcatttctgcgacgagtaatt 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|||||| ||||||| ||| |||||||||| |||||| ||||| |||||| ||||||
Sbjct: 71 tatctagaactaaaatacaactagatacatctatttctgcgacgaataattcgaaacgga 12
Query: 120 gggagta 126
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 60 tatctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaa 115
|||||| ||||||| | | ||||||||||| ||||||| ||| ||||||||||||
Sbjct: 79 tatctagaactaaaactcgtctagatacatccatttctgcgacaagtaattccgaa 24
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 28 tacttgtcataaaaatggataaaaatggatgttatctacaactaaaccacatctagatac 87
|||||||||| |||||||||||||| |||| || ||| ||||||| ||||||| ||||
Sbjct: 24 tacttgtcatcaaaatggataaaaaatgatg-tacctagaactaaaatacatctatatac 82
Query: 88 attc 91
||||
Sbjct: 83 attc 86
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 98/120 (81%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| ||||| ||||||| |||||||||||||||| ||| | | || ||
Sbjct: 120 tactccctccgtccggaaatacttgt-gggaaaatggataaaaatgaatg-tgtataaaa 63
Query: 69 ctaaaccacatctagatacattcatttcttggacgagtaattccgaacggagggagtatt 128
||||| ||| ||||||| ||| ||||||| ||| |||| |||| ||||||| ||||||
Sbjct: 62 ctaaagcacgtctagatgcatccatttctccgacaagtatttccagacggaggaagtatt 3
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||||||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 63 tctagatacatccatttcagcgacgagtaatttggaacggagggagta 110
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 28 tacttgtcataaaaatggataaaaatggatgttatctacaactaaaccacatctagatac 87
|||||||||| |||||||||||||| |||| || ||| ||||||| | ||||||||||
Sbjct: 24 tacttgtcatcaaaatggataaaaagagatg-tacctagaactaaaatatatctagatac 82
Query: 88 attc 91
||||
Sbjct: 83 attc 86
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 78 atctagatacattcatttcttggacgagtaattccgaacggagggagtattt 129
|||||||||||||||| ||| || |||| ||||||||||||| |||||||
Sbjct: 53 atctagatacattcatctctaaaacaagtatttccgaacggaggtagtattt 2
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtc 35
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtc 31
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 cttgtactccctccgttcggaattacttgtcataaaaat 43
|||||||||||||||| ||||| |||||| | |||||||
Sbjct: 124 cttgtactccctccgtccggaaatacttgacctaaaaat 86
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 88 attcatttcttggacgagtaattccgaacggagggagta 126
|||||||||| |||| |||| ||||| ||||||||||||
Sbjct: 43 attcatttctgggacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 5e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
||||||||||||| || || |||||||||| |||||| | ||||| ||| |||||| |
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagat-atatctaga 73
Query: 68 actaaaccacatctagatacat 89
|||||| ||||||| ||||||
Sbjct: 72 actaaaatacatctaaatacat 51
