miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 119 bits (60), Expect = 1e-26
Identities = 95/104 (91%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||
Sbjct: 9 ccctccgttcggaattacttgtctcgaaaatggatctatcta-gaactaaaatacgtcta 67
Query: 83 gatacatccatttc-gcgacgagtaattccgaacagagcgagta 125
|||||||||||||| | ||| ||||||||||||| ||| |||||
Sbjct: 68 gatacatccatttctgagacaagtaattccgaacggagggagta 111
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 107 ccctccgttcggaattacttgtctcagaaatggatgtatcta 66
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 111 bits (56), Expect = 3e-24
Identities = 91/100 (91%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 27 ccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagata 86
||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 13 ccgttcggaattatttgtctcgaaaatagatgtatcta-gaactaaaatacgtctagata 71
Query: 87 catcca-tttcgcgacgagtaattccgaacagagcgagta 125
|||||| ||||||||| ||||||||||||| ||| |||||
Sbjct: 72 catccattttcgcgacaagtaattccgaacggagggagta 111
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 107 ccctccgttcggaattacttgtcgcgaaaatggatgtatcta 66
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 101 bits (51), Expect = 3e-21
Identities = 95/107 (88%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||||| ||||||| ||||| |||||| || ||||||| ||||||||||| ||||
Sbjct: 107 ccctccgttccaaattactcgtctcagaaatggatatatctaa-aactaaaatacatcta 49
Query: 83 gatacatccatttc-gcgacgagtaattccgaacagagcgagtagta 128
|||||||||||||| |||||||||||||| |||| ||| ||||||||
Sbjct: 48 gatacatccatttctgcgacgagtaattcagaacggagggagtagta 2
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 99.6 bits (50), Expect = 1e-20
Identities = 79/86 (91%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 30 ttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagatacat 89
||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||
Sbjct: 108 ttcggaattacttgtttcgaaaatgaatgtatct-agaactaaaactcgtctagatacat 50
Query: 90 ccatttc-gcgacgagtaattccgaa 114
||||||| ||||| ||||||||||||
Sbjct: 49 ccatttctgcgacaagtaattccgaa 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 30 ttcggaattacttgtctcggaaatgaatgtatcta 64
|||||||||||||||| | |||||| |||||||||
Sbjct: 24 ttcggaattacttgtcgcagaaatggatgtatcta 58
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 99.6 bits (50), Expect = 1e-20
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||
Sbjct: 9 ccctccattcggaattacttgtctcggatatggatgtatct-agaactaaaatacatcta 67
Query: 83 gatacatccatttc-gcgacgagtaattcc 111
||||||| |||||| ||||| |||||||||
Sbjct: 68 gatacattcatttctgcgacaagtaattcc 97
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 26 tccgttcggaattacttgtctcggaaatgaatgtatcta 64
|||||| ||||||||||||| | ||||||||||||||||
Sbjct: 104 tccgtttggaattacttgtcgcagaaatgaatgtatcta 66
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||||| |||||||||||||| ||||| ||||||||| ||||||||||| |||||
Sbjct: 9 ccctccgttccgaattacttgtctcaaaaatggatgtatcta-gaactaaaatatgtcta 67
Query: 83 gatacatccattt 95
|||||||||||||
Sbjct: 68 gatacatccattt 80
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 81.8 bits (41), Expect = 2e-15
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
||||||||||||||||||||||| ||||| |||||||| | ||||||||||| ||||
Sbjct: 9 ccctccgttcggaattacttgtcataaaaatggatgtatct-ataactaaaatacatcta 67
Query: 83 gatacatccatttc-gcgacgagtaattccgaacagagcgagtag 126
||||||| |||||| ||||||||||| ||||||||| ||||||
Sbjct: 68 gatacattcatttcttggacgagtaatttcgaacagagggagtag 112
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 24 cctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctag 83
|||||||| |||||||| ||||||||||||| | |||| | ||||||||||||| |||||
Sbjct: 10 cctccgtttggaattacctgtctcggaaatggacgtat-ttagaactaaaatacatctag 68
Query: 84 atacatcca-tttcgcgacgagtaattccgaac 115
||| ||| | ||||||||| | |||||||||||
Sbjct: 69 atatatctattttcgcgacaattaattccgaac 101
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 49 gaaatgaatgtatctaagaactaaaatacgtctagatacatccatttc 96
|||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 45 gaaatggatgtatcta-gaactaaaatacgtctagatacatccatttc 91
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 69.9 bits (35), Expect = 9e-12
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Minus
Query: 26 tccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagat 85
||||||| |||||||||||| | ||||| ||||||||| ||||| ||| | ||||||||
Sbjct: 104 tccgttccgaattacttgtcgcataaatggatgtatcta-gaactgaaaaatgtctagat 46
Query: 86 acatccatttc-gcgacgagtaattccgaac 115
||||||||||| |||| |||||||||||||
Sbjct: 45 acatccatttctacgacaagtaattccgaac 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
||||||||||||||||||||||| |||||| |||||||||
Sbjct: 9 ccctccgttcggaattacttgtcgtagaaatggatgtatcta 50
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 69.9 bits (35), Expect = 9e-12
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||||| ||||||| ||| | |||||| ||||||||| |||||||||||| ||||
Sbjct: 106 ccctccgttccaaattactcgtcgctgaaatggatgtatcta-gaactaaaatacatcta 48
Query: 83 gatacatccat 93
|||||||||||
Sbjct: 47 gatacatccat 37
Score = 50.1 bits (25), Expect = 8e-06
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 79 tctagatacatccatttc-gcgacgagtaattccgaacagagcgagtag 126
|||||||||||||||||| ||||||||||||| |||| ||| ||||||
Sbjct: 63 tctagatacatccatttcagcgacgagtaatttggaacggagggagtag 111
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 69.9 bits (35), Expect = 9e-12
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatttc 96
||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 80 aaatggatgtatcta-gaactaaaatacgtctagatacatccatttc 35
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 67.9 bits (34), Expect = 3e-11
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 33 ggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagatacatcca 92
||||||||||||| |||||| ||||||||| ||||| |||||| ||||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatcta-gaactgaaatacatctagatacatcca 39
Query: 93 ttt-cgcgacgagtaattccgaacagagcgagta 125
||| |||||| |||| ||| | |||||| |||||
Sbjct: 38 tttccgcgacaagtatttcgggacagagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 35 aattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||||| ||| | |||||||||||||||| |||||||||||| ||||||||||| |||
Sbjct: 95 aattactcgtcgcagaaatgaatgtatcta-gaactaaaatacaactagatacatctatt 37
Query: 95 tc-gcgacgagtaattc 110
|| ||||||| ||||||
Sbjct: 36 tctgcgacgaataattc 20
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||||| ||||||| ||| | |||||| ||||||||| ||||||||||| ||||
Sbjct: 107 ccctccgttccaaattactcgtcgcagaaatggatgtatctat-aactaaaatacatcta 49
Query: 83 gatacatccattt 95
|||||||||||||
Sbjct: 48 gatacatccattt 36
Score = 44.1 bits (22), Expect = 5e-04
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 81 tagatacatccatttc-gcgacgagtaatt 109
|||||||||||||||| |||||||||||||
Sbjct: 66 tagatacatccatttctgcgacgagtaatt 95
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatttc 96
|||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct: 80 aaatgaatgtattta-gaactaaaatacgtctagatacatcaatttc 35
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 35 aattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagatacatccat 93
||||||| ||| | |||||| ||||||||| |||||||||||| |||||||||||||||
Sbjct: 21 aattactcgtcgctgaaatggatgtatcta-gaactaaaatacatctagatacatccat 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 79 tctagatacatccatttc-gcgacgagtaatt 109
|||||||||||||||||| |||||||||||||
Sbjct: 52 tctagatacatccatttcagcgacgagtaatt 21
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatttc 96
||||| ||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 80 aaatggatgtatcta-gaagtaaaatacgtctagatacatccatttc 35
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 80 aaatggatgtatcta-gaactaaaatacatctagatacatccatt 37
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 46 aaatggatgtatcta-gaactaaaatacgtctaggtacatccatt 89
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 46 aaatggatgtatcta-gaactaaaatacatctagatacatccatt 89
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 80 aaatggatgtatcta-gaactaaaatacatctagatacatccatt 37
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccat 93
||||||||||||||| |||||||||||| |||||||||| ||||
Sbjct: 80 aaatgaatgtatcta-gaactaaaatacatctagatacacccat 38
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||||| | |||||||||||| ||||| |||| |||| |||||||||||| ||||
Sbjct: 9 ccctccgtccagaattacttgtcatcaaaatggatgtgtcta-gaactaaaatacatcta 67
Query: 83 gatacatccatttc 96
|||| |||||||||
Sbjct: 68 gatatatccatttc 81
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 49 gaaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
|||||| ||||||||| ||||||||||| ||||||||||||||||
Sbjct: 81 gaaatggatgtatctat-aactaaaatacatctagatacatccatt 37
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 65 agaactaaaatacgtctagatacatccatt 94
||||||||||||| ||||||||||||||||
Sbjct: 66 agaactaaaatacatctagatacatccatt 37
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 49 gaaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||||||||||| || |||||||||| | ||||||||||||||||
Sbjct: 45 gaaatgaatgtattta-gaactaaaatgcatctagatacatccatt 89
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 50.1 bits (25), Expect = 8e-06
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 49 gaaatgaatgtatctaagaactaaaa-tacgtctagatacatcca-tttcgcgacgagta 106
|||||| ||||||||| ||||||||| | |||||||||||||||| ||| ||| | ||||
Sbjct: 36 gaaatggatgtatcta-gaactaaaaatgcgtctagatacatccatttttgcggcaagta 94
Query: 107 attccgaacagag 119
|||||| ||||||
Sbjct: 95 attccggacagag 107
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 46 aaatgaatgtatcta-gaactaaaatatatctagatacatacatt 89
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 50.1 bits (25), Expect = 8e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 55 aatgtatctaagaactaaaatacgtctagatacatcc 91
|||||||||| |||||||||||| |||||||||||||
Sbjct: 51 aatgtatcta-gaactaaaatacatctagatacatcc 86
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccat 93
||||| ||||||||| |||||||||||| ||| |||||||||||
Sbjct: 36 aaatggatgtatcta-gaactaaaatacatcttgatacatccat 78
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaact-aaaatacgtctagatacatccatttc 96
|||||||||||||| |||||| ||||||||| |||||||||| |||||
Sbjct: 45 aaatgaatgtatct-agaactaaaaatacgtttagatacatctatttc 91
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacat 89
|||| |||||||||| |||||||||||| |||||||||||
Sbjct: 41 aaataaatgtatcta-gaactaaaatacatctagatacat 79
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 56 atgtatctaagaactaaaatacgtctagatacatcc 91
||||||||| ||||||||||| ||||||||||||||
Sbjct: 84 atgtatcta-gaactaaaatatgtctagatacatcc 50
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 65 agaactaaaatacgtctagatacatccattt 95
|||||||||||||||||| |||||| |||||
Sbjct: 60 agaactaaaatacgtctaaatacattcattt 90
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 agaactaaaatacgtctagatacatcc 91
||||||||||||| |||||||||||||
Sbjct: 60 agaactaaaatacatctagatacatcc 86
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 65 agaactaaaatacgtctagatacatcc 91
||||||||||||| |||||||||||||
Sbjct: 87 agaactaaaatacatctagatacatcc 61
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 agaactaaaatacgtctagatacatcc 91
||||||||||||| |||||||||||||
Sbjct: 60 agaactaaaatacatctagatacatcc 86
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 67 aactaaaatacgtctagatacatccatttcg 97
|||||||||| |||||||||||| |||||||
Sbjct: 60 aactaaaataagtctagatacattcatttcg 90
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 5e-04
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 70 taaaatacgtctagatacatccatttc-gcgacgagtaattccgaacagagcgagtag 126
|||||||| ||||||||||| |||||| |||||||||||| |||| ||| ||||||
Sbjct: 65 taaaatacatctagatacattcatttcttggacgagtaattctgaacggagggagtag 122
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
|||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 117 ccctccgttcagaattactcgtccaagaaatgaatgtatcta 76
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccattt 95
|||||||||||| || ||||||||||| || ||||| |||||||||
Sbjct: 80 aaatgaatgtattta-gaactaaaatatgtttagatgcatccattt 36
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
|||||||||||||| |||||||| |||||||||||||||
Sbjct: 116 ccctccgttcggaaatacttgtcctaaaaatgaatgtatcta 75
>RF00906;MIR1122;EU730900.1/55128-55253 15368:Brachypodium
distachyon
Length = 126
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 68 actaaaatacgtctagatacat 89
||||||||||||||||||||||
Sbjct: 63 actaaaatacgtctagatacat 42
