miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 149 bits (75), Expect = 1e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||| |||||||||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 5 tactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaatacat 64
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
|||||||||| |||||| ||||||||||||||||||||| ||||||
Sbjct: 65 ctagatacattcatttctgcgacaagtaattccaaacggatggagta 111
Score = 81.8 bits (41), Expect = 2e-15
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
||||||| |||||| ||||||||||||| |||||||| ||||||||||| || |||
Sbjct: 112 ctactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagt 53
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagtac 126
|||||||||||| || || ||||||||||||| || |||||||||||
Sbjct: 52 tctagatacatccatatccgagacaagtaattccgaatggagggagtac 4
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 147 bits (74), Expect = 5e-35
Identities = 101/110 (91%)
Strand = Plus / Plus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 4 ctactccctccgttcggaattacttgtctcgaaaatggatctatctagaactaaaatacg 63
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagtact 127
|||||||||||| |||||| ||||||||||||| |||||||||||||||
Sbjct: 64 tctagatacatccatttctgagacaagtaattccgaacggagggagtact 113
Score = 109 bits (55), Expect = 1e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
||||||| ||| |||| ||||||||||||| |||||||||||||
Sbjct: 51 ctagatagatccattttcgagacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 133 bits (67), Expect = 7e-31
Identities = 97/107 (90%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || |
Sbjct: 5 tactccctccgttccgaattacttgtctcaaaaatggatgtatctagaactaaaatatgt 64
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
||||||||||| |||| | ||||||||||||| |||||||||||||
Sbjct: 65 ctagatacatccattttttcgacaagtaattcagaacggagggagta 111
Score = 87.7 bits (44), Expect = 4e-17
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||||| |||||||||||| | ||||||||||||||||| || ||| |
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggagggagtac 126
||||||||||| |||| | |||||||||||| ||||||||||||||
Sbjct: 51 ctagatacatccatttttgagacaagtaattcggaacggagggagtac 4
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 121 bits (61), Expect = 3e-27
Identities = 94/105 (89%)
Strand = Plus / Minus
Query: 21 ctccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacatct 80
|||||||||||| ||||||| ||||||||||||||| |||||| ||||||| |||||||
Sbjct: 109 ctccctccgttccaaattactcgtctcagaaatggatatatctaaaactaaaatacatct 50
Query: 81 agatacatcgatttctacgacaagtaattccaaacggagggagta 125
||||||||| |||||| |||| |||||||| |||||||||||||
Sbjct: 49 agatacatccatttctgcgacgagtaattcagaacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgttctgaattactcgtcgcagaaatggatgtatctaga 52
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 113 bits (57), Expect = 7e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 26 tccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacatctagata 85
||||||| |||||||||||| || |||||||||||||||||||| || | ||||||||
Sbjct: 104 tccgttccgaattacttgtcgcataaatggatgtatctagaactgaaaaatgtctagata 45
Query: 86 catcgatttctacgacaagtaattccaaacggaggga 122
|||| ||||||||||||||||||||| ||||||||||
Sbjct: 44 catccatttctacgacaagtaattccgaacggaggga 8
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 22 tccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctaga 52
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 111 bits (56), Expect = 3e-24
Identities = 95/108 (87%)
Strand = Plus / Plus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
||||| || ||||||||||||| ||||||| |||| |||||||||||||||||| |||
Sbjct: 4 ctacttccaccgttcggaattatttgtctcgaaaatagatgtatctagaactaaaatacg 63
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
|||||||||||| |||| |||||||||||||| |||||||||||||
Sbjct: 64 tctagatacatccattttcgcgacaagtaattccgaacggagggagta 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctaga 64
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 109 bits (55), Expect = 1e-23
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
||||||||||||||||||||||||||| | ||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgttcggaattacttgtcataaaaatggatgtatctataactaaaatacat 64
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
|||||||||| |||||| ||| ||||||| | ||| |||||||||
Sbjct: 65 ctagatacattcatttcttggacgagtaatttcgaacagagggagta 111
Score = 83.8 bits (42), Expect = 6e-16
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 17 gctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattac 76
||||||||||| ||||| ||||||| ||| ||||||| ||||||||||| || |||
Sbjct: 113 gctactccctctgttcgaaattactcgtccaagaaatgaatgtatctagatgtattttag 54
Query: 77 atctagatacatcgatttctacgacaagtaattccaaacggagggagtac 126
| |||||||||| |||| || ||||||||||||| ||||||||||||||
Sbjct: 53 ttatagatacatccatttttatgacaagtaattccgaacggagggagtac 4
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 107 bits (54), Expect = 4e-23
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 35 aattacttgtctcagaaatggatgtatctagaactaaattacatctagatacatcgattt 94
||||||| ||| |||||||| ||||||||||||||||| |||| ||||||||||| ||||
Sbjct: 95 aattactcgtcgcagaaatgaatgtatctagaactaaaatacaactagatacatctattt 36
Query: 95 ctacgacaagtaattccaaacggagggagtactt 128
|| |||| | |||||| |||||||||||||||||
Sbjct: 35 ctgcgacgaataattcgaaacggagggagtactt 2
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctag 65
||||||||||||| |||||| | ||| ||||||| |||||||||||
Sbjct: 5 tactccctccgtttcgaattattcgtcgcagaaatagatgtatctag 51
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 103 bits (52), Expect = 6e-22
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||||| ||||||| ||| |||||||||||||||||| ||||||| |||||
Sbjct: 111 tactccctccgttccaaattactcgtcgcagaaatggatgtatctataactaaaatacat 52
Query: 79 ctagatacatcgatttctacgacaagtaattccaaacggaggga 122
||||||||||| |||| | ||| |||||||| ||||||||||
Sbjct: 51 ctagatacatccatttattggacgagtaattcggaacggaggga 8
Score = 65.9 bits (33), Expect = 1e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 22 tccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacatcta 81
||||||||||| |||||||| ||| | ||||||||||||||||| || ||| | ||
Sbjct: 8 tccctccgttccgaattactcgtccaataaatggatgtatctagatgtattttagttata 67
Query: 82 gatacatcgatttctacgacaagtaattccaaacggagggagtac 126
|||||||| |||||| |||| ||||||| ||||||||||||||
Sbjct: 68 gatacatccatttctgcgacgagtaatttggaacggagggagtac 112
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 48 agaaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaa 107
||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||| |||
Sbjct: 44 agaaatggatgtatctagaactaaaatacgtctagatacatccatttctatgacaaataa 103
Query: 108 ttccaaacggagggagta 125
|||| ||||||||||||
Sbjct: 104 ttccggacggagggagta 121
Score = 67.9 bits (34), Expect = 3e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||| |||||||| ||||| ||||||||||||||||||| || ||| |
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 79 ctagatacatcgatttct 96
||||||||||| ||||||
Sbjct: 61 ctagatacatccatttct 44
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 82/93 (88%)
Strand = Plus / Plus
Query: 35 aattacttgtctcagaaatggatgtatctagaactaaattacatctagatacatcgattt 94
||||||| ||| | |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 21 aattactcgtcgctgaaatggatgtatctagaactaaaatacatctagatacatccatac 80
Query: 95 ctacgacaagtaattccaaacggagggagtact 127
| ||||||||||||| |||||||||||||||
Sbjct: 81 gtgcgacaagtaattcggaacggagggagtact 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||||||||||||| |||||||||||| || ||||||||||||||| || ||| |
Sbjct: 111 tactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagtt 52
Query: 79 ctagatacatcgatttctacgacaagtaatt 109
||||||||||| ||||| |||| |||||||
Sbjct: 51 ctagatacatccatttcagcgacgagtaatt 21
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 24 cctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacatctaga 83
|||||||| |||||||| |||||| |||||||| |||| |||||||||| ||||||||||
Sbjct: 10 cctccgtttggaattacctgtctcggaaatggacgtatttagaactaaaatacatctaga 69
Query: 84 tacatcgatttctacgacaagtaattccaaacggagggagtact 127
|| ||| |||| |||||| ||||||| ||||||||| |||||
Sbjct: 70 tatatctattttcgcgacaattaattccgaacggagggggtact 113
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
||||||||||||||| ||||||| ||| | |||||||||||||||||||||||| ||||
Sbjct: 111 ctactccctccgttccaaattactcgtcgctgaaatggatgtatctagaactaaaataca 52
Query: 78 tctagatacatc 89
||||||||||||
Sbjct: 51 tctagatacatc 40
Score = 61.9 bits (31), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacatctag 82
|||||||||| || |||||||||||| | ||||||||||||||| || ||| |||||
Sbjct: 9 ccctccgttccga-ttacttgtctcacatatggatgtatctagatgtattttagttctag 67
Query: 83 atacatcgatttctacgacaagtaattccaaacggagggagta 125
||||||| ||||| |||| ||||||| |||||||||||||
Sbjct: 68 atacatccatttcagcgacgagtaatttggaacggagggagta 110
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 33 ggaattacttgtctcagaaatggatgtatctagaactaaattacatctagatacatcgat 92
||||||||||||| |||||||||||||||||||||| || |||||||||||||||| ||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatctagaactgaaatacatctagatacatccat 38
Query: 93 ttctacgacaagtaattccaaacggagggagtactt 128
||| ||||||||| ||| || ||||||||||||
Sbjct: 37 ttccgcgacaagtatttcgggacagagggagtactt 2
Score = 75.8 bits (38), Expect = 1e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
||||||||| || | ||| |||||||| | |||||||||||||||||| || | | |
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 79 ctagatacatcgatttctacgacaagtaattcca 112
||||||||||| ||||||||||||||||||||||
Sbjct: 65 ctagatacatccatttctacgacaagtaattcca 98
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| ||
Sbjct: 80 aaatggatgtatctagaactaaaatacatctagatacatccattcccccgacaagtattt 21
Query: 110 ccaaacggagggagtact 127
|| ||||||||||||||
Sbjct: 20 ccggacggagggagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| ||||| |||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctaga 52
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 89.7 bits (45), Expect = 9e-18
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
||||||||| ||||||||||||||| || ||||| ||||||||||||||||| | |
Sbjct: 119 tactccctctattcggaattacttgtttcgaaaatgaatgtatctagaactaaaactcgt 60
Query: 79 ctagatacatcgatttctacgacaagtaattcc 111
||||||||||| |||||| ||||||||||||||
Sbjct: 59 ctagatacatccatttctgcgacaagtaattcc 27
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 30 ttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||||||| ||||||||||||||||||||
Sbjct: 24 ttcggaattacttgtcgcagaaatggatgtatctaga 60
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 87.7 bits (44), Expect = 4e-17
Identities = 94/108 (87%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtc-tcagaaatggatgtatctagaactaaattaca 77
|||||||||||| | |||||||||||| ||| |||||||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtccagaattacttgtcatca-aaatggatgtgtctagaactaaaataca 63
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
|||||||| ||| ||||| | |||||||| || | ||||||||||||
Sbjct: 64 tctagatatatccatttcaatgacaagtattttcggacggagggagta 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 87/108 (80%)
Strand = Plus / Minus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
||||||||||||| || || |||||||| ||||||||| |||||||| || |||
Sbjct: 112 ctactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttagt 53
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
|||||| ||||| |||| | |||||||||||| ||||||||||||
Sbjct: 52 tctagacacatccattttgatgacaagtaattctggacggagggagta 5
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||| ||
Sbjct: 46 aaatggatgtatctagaactaaaatacatctagatacatccattcccccgacaagtattt 105
Query: 110 ccaaacggagggagta 125
|| ||||||||||||
Sbjct: 106 ccggacggagggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| ||||| |||||||| | ||||||||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctaga 74
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||| ||
Sbjct: 80 aaatggatgtatctagaactaaaatacatctagatacatccattcctatgacaagtattt 21
Query: 110 ccaaacggagggagta 125
|| |||| |||||||
Sbjct: 20 ccggacggcgggagta 5
Score = 50.1 bits (25), Expect = 8e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||| |||| ||||| |||||||| || ||||||||||||||||
Sbjct: 4 ctactcccgccgtccggaaatacttgtcataggaatggatgtatctaga 52
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| ||| |||||||||||| |||||| |||||| |||||
Sbjct: 80 aaatggatgtatctagaactaaaatacgtctagatacatccatttctccgacaaataatt 21
Query: 110 ccaaacggagggagta 125
| ||||||||||||
Sbjct: 20 tcggacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctaga 52
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
|||||||||||||||||| |||| |||||||||||| || |||||| ||||||||| ||
Sbjct: 46 aaatggatgtatctagaattaaaatacatctagatagattcatttctccgacaagtattt 105
Query: 110 ccaaacggagggagta 125
|| ||||||||||||
Sbjct: 106 ccggacggagggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| ||||| |||||||| ||||||| || ||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctaga 74
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||| || |||| ||||||||||||||| |||||| ||| |||||||
Sbjct: 46 aaatggatgtatctacaattaaaatacatctagatacattcatttcttggacgagtaatt 105
Query: 110 ccaaacggagggagta 125
| |||||||||||||
Sbjct: 106 ctgaacggagggagta 121
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 17 gctactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||||||| |||||||| ||| ||||||| |||||||||||
Sbjct: 123 gctactccctccgttcagaattactcgtccaagaaatgaatgtatctaga 74
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| ||||||| |||||||| || | ||||||||||||
Sbjct: 36 aaatggatgtatctagaactaaaatacatcttgatacatccataagtgcgacaagtaatt 95
Query: 110 ccaaacggaggg 121
| |||||||||
Sbjct: 96 cggaacggaggg 107
Score = 48.1 bits (24), Expect = 3e-05
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
|||| |||||||||| |||||||||||| || ||||||||||| ||| || |||
Sbjct: 112 ctacgccctccgttccgaattacttgtcgcacttatggatgtatcaagatgtattttagt 53
Query: 78 tctagatacatcgatttctacgacaagtaatt 109
|||||||||||| |||| ||||| |||||||
Sbjct: 52 tctagatacatccattttaacgacgagtaatt 21
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
|||||||| |||||||||||||| |||||||||||||||| ||| ||| ||||| || ||
Sbjct: 80 aaatggatatatctagaactaaaatacatctagatacatccattcctatgacaaatattt 21
Query: 110 ccaaacggagggagta 125
|| || |||||||||
Sbjct: 20 ccggacagagggagta 5
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 48 agaaatggatgtatctagaactaaattacatctagatacatc 89
||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 82 agaaatggatgtatctataactaaaatacatctagatacatc 41
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||| |||||| |||||||||| ||| |||||||||||| |||||| |||||||| ||
Sbjct: 80 aaatgaatgtatttagaactaaaatacgtctagatacatcaatttctcagacaagtattt 21
Query: 110 ccaaacggagggagtac 126
| |||||||||||||
Sbjct: 20 tcggacggagggagtac 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| || || ||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtctgagaaattgatgtatctaga 52
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||||||||||| ||| ||||| |||||| ||| || |||||||| ||
Sbjct: 46 aaatggatgtatctagaactaaaatacgtctaggtacatccattcctctgacaagtattt 105
Query: 110 ccaaacggagggagtac 126
|| || ||||||||||
Sbjct: 106 ccggacagagggagtac 122
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagta 106
|||||||||||||||||| |||| ||| |||||||||||| |||||| ||||||||
Sbjct: 80 aaatggatgtatctagaagtaaaatacgtctagatacatccatttctctgacaagta 24
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattacat 78
|||| ||| |||||||| |||||||| ||||||||||||||||||| || |||| |
Sbjct: 5 tactgcctacgttcggatatacttgtcagagaaatggatgtatctagacgtattttactt 64
Query: 79 ctagatacatcgattt 94
||||||||||| ||||
Sbjct: 65 ctagatacatccattt 80
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 63.9 bits (32), Expect = 5e-10
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctagaactaaattaca 77
||||| ||| ||||| ||||||| || |||||||| |||||||||||| |||| || |
Sbjct: 4 ctacttccttcgttctaaattactcgttgcagaaatgaatgtatctagaattaaaataaa 63
Query: 78 tctagatacatcgatttctacgacaagtaattccaaacggagggagta 125
||||||||||| || ||| ||||| |||||| |||||||| |||||
Sbjct: 64 tctagatacattcatacctatgacaaataattcgaaacggagagagta 111
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatc-tagatacatcgatttctacgacaagtaat 108
||||||||||||||||||||||| |||||| | |||||||| ||| || |||||||| |
Sbjct: 46 aaatggatgtatctagaactaaaatacatctttgatacatccattcctcggacaagtatt 105
Query: 109 tccaaacggagggagtact 127
| | ||||||||||||||
Sbjct: 106 ttcggacggagggagtact 124
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggat 57
|||||||||||| ||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggat 43
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 55 gatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaattccaaa 114
|||||||||| ||||||| || ||||||||||| |||| || |||||||| |||| ||
Sbjct: 50 gatgtatctataactaaaataagtctagatacattcatttttaggacaagtatttccgaa 109
Query: 115 cggagggagta 125
|||||||||||
Sbjct: 110 cggagggagta 120
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 18 ctactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
||||||||||||||||||| |||||||| | ||||| |||||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtcctaaaaatgaatgtatctaga 73
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagataca 87
||||| ||||||||||||||||| ||||||||||||||
Sbjct: 80 aaatgaatgtatctagaactaaaatacatctagataca 43
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 53 tggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaattcca 112
|||||||||||| ||||||| || ||||||||||| || |||| |||||||| ||||
Sbjct: 48 tggatgtatctataactaaaataagtctagatacattcatctctaggacaagtatttccg 107
Query: 113 aacggagggagtac 126
|||||||||||||
Sbjct: 108 gacggagggagtac 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||||||||| ||||| |||||||| ||| ||| |||||||||||
Sbjct: 120 tactccctccgtccggaaatacttgtcctagagatgaatgtatctaga 73
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 48 agaaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaa 107
||||||| |||||| |||||||||| | |||||||||||||| ||| | |||||||||
Sbjct: 44 agaaatgaatgtatttagaactaaaatgcatctagatacatccattctttcgacaagtat 103
Query: 108 ttccaaacggagggagta 125
|| | ||||||||||||
Sbjct: 104 tttctgacggagggagta 121
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 56 atgtatctagaactaaattacatctagatacatc 89
||||||||||||||||| ||||||||||||||||
Sbjct: 52 atgtatctagaactaaaatacatctagatacatc 85
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatct 63
|||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 143 tactccctccgttccgaattacttgtcgcaggtatggatgtatct 99
Score = 54.0 bits (27), Expect = 5e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 35 aattacttgtctcagaaatggatgtatctagaactaaattacatctagatacatcgattt 94
||||||| ||| |||||||| || |||||||||||||| ||||| || ||| || || |
Sbjct: 95 aattactcgtcgcagaaatgaatatatctagaactaaaatacatttatatatattcatat 36
Query: 95 ctacgacaagtaattccaaacggagggagta 125
|| |||||||||||| |||| ||||||||
Sbjct: 35 ctgtgacaagtaattcggaacgaagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 81 agatacatcgatttctacgacaagtaattccaaacggagggagtac 126
||||||||| || || ||||||||||||| ||||||||||||||
Sbjct: 99 agatacatccatacctgcgacaagtaattcggaacggagggagtac 144
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 57 tgtatctagaactaaattacatctagatacatc 89
|||||||||||||||| ||||||||||||||||
Sbjct: 53 tgtatctagaactaaaatacatctagatacatc 85
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 56 atgtatctagaactaaattacatctagatacat 88
||||||||||||||||| |||||||||||||||
Sbjct: 47 atgtatctagaactaaaatacatctagatacat 79
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 91 atttctacgacaagtaattccaaacggagggagt 124
|||||| ||||||||| |||| ||||||||||||
Sbjct: 34 atttctccgacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 58.0 bits (29), Expect = 3e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 48 agaaatggatgtatctagaact-aaattacatctagatacatcgatttctacgacaagta 106
|||||||||||||||||||||| ||| | | |||||||||||| |||| | || ||||||
Sbjct: 35 agaaatggatgtatctagaactaaaaatgcgtctagatacatccatttttgcggcaagta 94
Query: 107 attcc 111
|||||
Sbjct: 95 attcc 99
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 22 tccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||||| || |||||||||||| | || |||||||||||||||||
Sbjct: 110 tccctctgtccggaattacttgccgcaaaaatggatgtatctaga 66
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagta 106
|||||||||||||||||| || | ||||||||||||||| ||| ||| ||||||||
Sbjct: 46 aaatggatgtatctagaattataatacatctagatacatacattcctatgacaagta 102
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatg 54
|||||||||||| |||||||||||||| || |||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatg 40
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 54 ggatgtatctagaactaaattacatctagatacatc 89
|||||||| |||||||||| ||||||||||||||||
Sbjct: 50 ggatgtatttagaactaaaatacatctagatacatc 85
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 55 gatgtatctagaactaaattacatctagatacatc 89
||||||| |||||||||| ||||||||||||||||
Sbjct: 96 gatgtatgtagaactaaaatacatctagatacatc 62
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 54.0 bits (27), Expect = 5e-07
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 51 aatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaattc 110
|||||||||||||| ||||||| || ||||||| |||| |||| || |||||||| ||
Sbjct: 79 aatggatgtatctataactaaaataagtctagattcatccatttttaggacaagtatttt 20
Query: 111 caaacggagggagta 125
| ||||||||||||
Sbjct: 19 tagacggagggagta 5
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacat 88
||||| ||||||||||||||||| || ||||||||||||
Sbjct: 46 aaatgaatgtatctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 56 atgtatctagaactaaattacatctagatacatc 89
|||||||||||| |||| ||||||||||||||||
Sbjct: 52 atgtatctagaattaaaatacatctagatacatc 85
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaact-aaattacatctagatacatcgatttctacgacaagtaat 108
||||| |||||||||||||| ||| ||| | |||||||||| |||||| ||||| ||| |
Sbjct: 45 aaatgaatgtatctagaactaaaaatacgtttagatacatctatttctccgacaggtatt 104
Query: 109 tccaaacggagggagta 125
||| | ||||||||||
Sbjct: 105 tccggatggagggagta 121
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 50.1 bits (25), Expect = 8e-06
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||||||||||||| || |||| || |||||||||||| | || || |||||||| ||
Sbjct: 80 aaatggatgtatctataagtaaaataagtctagatacatctacttttaggacaagtattt 21
Query: 110 ccaaacggagggagtac 126
| |||| |||||||||
Sbjct: 20 tcgaacgaagggagtac 4
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 66 aactaaattacatctagatacatcgatttctacgacaagta 106
||||||| || ||||||||||||| ||||||| ||||||||
Sbjct: 64 aactaaaataaatctagatacatctatttctaggacaagta 24
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtct 46
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtct 32
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtct 46
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgttctgaattacttgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 16 agctactccctccgttcggaattacttgtct 46
||||||||||||||||| ||||||||||||
Sbjct: 134 agctactccctccgttccaaattacttgtct 104
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
|||| |||||||||| ||||||| || |||| ||||| | ||||||| | |||||| ||
Sbjct: 45 aaattgatgtatctataactaaaataagtctacatacaaccatttctagggcaagtattt 104
Query: 110 ccaaacggagggagta 125
|| ||||||||||||
Sbjct: 105 tcagacggagggagta 120
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatctaga 66
|||| ||||||||||||| ||||||| | ||| ||| |||||||||||
Sbjct: 5 tactacctccgttcggaaatacttgttttagagatgaatgtatctaga 52
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 50 aaatggatgtatctagaactaaattacatctagatacatcgatttctacgacaagtaatt 109
||||| |||||| |||||||||| || | ||||| |||| |||| || | |||||||||
Sbjct: 80 aaatgaatgtatttagaactaaaatatgtttagatgcatccatttttatgtcaagtaatt 21
Query: 110 ccaaacggagggagta 125
|| ||||||||||||
Sbjct: 20 ccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtc 45
|||||||||||| ||||||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtc 95
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatggatgtatcta 64
|||||||||||| |||||||||||| | | ||||||||| |||||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatcta 50
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtctcagaaatg 54
|||||||||||| ||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcccagaaatg 40
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacat 88
|||||||||||| |||||||||| ||| |||| ||||||
Sbjct: 46 aaatggatgtatgtagaactaaaatacgtctaaatacat 84
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 59 tatctagaactaaattacatctagatacatc 89
|||||||||||||| |||||||| |||||||
Sbjct: 80 tatctagaactaaaatacatctaaatacatc 50
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 55 gatgtatctagaactaaattacatctagatacatc 89
|||||||||||||||||| || ||||||||||||
Sbjct: 85 gatgtatctagaactaaaatatgtctagatacatc 51
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 50 aaatggatgtatctagaactaaattacatctagatacat 88
|||||||||||||||| ||| || ||| |||||||||||
Sbjct: 36 aaatggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;EF059989.1/52700-52824 29664:Brachypodium
sylvaticum
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 98 cgacaagtaattccaaacggagggagtactt 128
||||||||||||||| ||||||||||||||
Sbjct: 32 cgacaagtaattccagccggagggagtactt 2
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 gatgtatctagaactaaattacatctagatacat 88
|||||| ||||||||||| |||||||| ||||||
Sbjct: 51 gatgtacctagaactaaaatacatctatatacat 84
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 gatgtatctagaactaaattacatctagatacat 88
|||||| ||||||||||| || ||||||||||||
Sbjct: 51 gatgtacctagaactaaaatatatctagatacat 84
