miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 161 bits (81), Expect = 3e-39
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |
Sbjct: 4 ctactccctccgttcggaattacttgtctcgaaaatggatctatctagaactaaaatacg 63
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggagtac 116
| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 64 tctagatacatccatttctgagacaagtaattccgaacggagggagtac 112
Score = 93.7 bits (47), Expect = 5e-19
Identities = 92/107 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
||||||||||||||||||||||||||||| || ||||||||||||||| || || |
Sbjct: 111 tactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagtt 52
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagta 115
|||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 51 ctagatagatccattttcgagacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 149 bits (75), Expect = 1e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
|||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtctcaaaaatggatgtatctagaactaaaatatgt 64
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagta 115
||||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 65 ctagatacatccattttttcgacaagtaattcagaacggagggagta 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
|||||||||||||| |||||||||||| | ||||||||||||||| || || |
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagtac 116
||||||||||||||| | |||||||||||| |||||||||||||||
Sbjct: 51 ctagatacatccatttttgagacaagtaattcggaacggagggagtac 4
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 149 bits (75), Expect = 1e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 tactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaatacat 64
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagta 115
||||||||| ||||||| |||||||||||||| |||||| ||||||
Sbjct: 65 ctagatacattcatttctgcgacaagtaattccaaacggatggagta 111
Score = 65.9 bits (33), Expect = 1e-10
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
||||||| |||||| ||||||||||||| | || ||| ||||||||||| || ||
Sbjct: 112 ctactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagt 53
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggagtac 116
| ||||||||||||| || |||||||||||||||| |||||||||||
Sbjct: 52 tctagatacatccatatccgagacaagtaattccgaatggagggagtac 4
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttagata 75
||||||| |||||||||||| | | |||||||||||||||||| ||| |||| ||||||
Sbjct: 104 tccgttccgaattacttgtcgcataaatggatgtatctagaactgaaaaatgtctagata 45
Query: 76 catccatttctacgacaagtaattccgaacggaggga 112
|||||||||||||||||||||||||||||||||||||
Sbjct: 44 catccatttctacgacaagtaattccgaacggaggga 8
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 12 tccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||||||||||| || |||||||||||||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctaga 52
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 127 bits (64), Expect = 4e-29
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
||||| || ||||||||||||| |||||||| | || ||||||||||||||||||||| |
Sbjct: 4 ctacttccaccgttcggaattatttgtctcgaaaatagatgtatctagaactaaaatacg 63
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggagta 115
| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 64 tctagatacatccattttcgcgacaagtaattccgaacggagggagta 111
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctaga 64
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 107 bits (54), Expect = 3e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||
Sbjct: 48 atggatgtatctagaactaaaatacgtctagatacatccatttctatgacaaataattcc 107
Query: 102 gaacggagggagta 115
| ||||||||||||
Sbjct: 108 ggacggagggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctaga 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 78 tccatttctacgacaagtaattccgaacggagggagta 115
||||||| |||||||||| ||||| ||||||||||||
Sbjct: 42 tccattttgacgacaagtacttccggacggagggagta 5
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 105 bits (53), Expect = 1e-22
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 11 ctccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgttt 70
|||||||||||| ||||||| ||||| || |||||| |||||| |||||||||| | |
Sbjct: 109 ctccctccgttccaaattactcgtctcagaaatggatatatctaaaactaaaatacatct 50
Query: 71 agatacatccatttctacgacaagtaattccgaacggagggagta 115
|||||||||||||||| |||| |||||||| ||||||||||||||
Sbjct: 49 agatacatccatttctgcgacgagtaattcagaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 88/106 (83%)
Strand = Plus / Plus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
||||||||||||||| |||||||| ||| | || ||||||||||||||| || ||
Sbjct: 4 ctactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttagt 63
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggag 113
|||||||| |||||||||| ||| ||||||| ||||||||||||
Sbjct: 64 tttagatatatccatttctgagacgagtaatttggaacggagggag 109
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 103 bits (52), Expect = 5e-22
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
||||||||| ||||||||||||||| ||| | ||| |||||||||||||||||| ||
Sbjct: 119 tactccctctattcggaattacttgtttcgaaaatgaatgtatctagaactaaaactcgt 60
Query: 69 ttagatacatccatttctacgacaagtaattccgaa 104
||||||||||||||||| |||||||||||||||||
Sbjct: 59 ctagatacatccatttctgcgacaagtaattccgaa 24
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 20 ttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||| | || |||||||||||||||
Sbjct: 24 ttcggaattacttgtcgcagaaatggatgtatctaga 60
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 99.6 bits (50), Expect = 8e-21
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| || ||||||||||||||||| |||||| ||||| |
Sbjct: 78 atggatgtatctagaactaaaatacgtctagatacatccatttctccgacaaataatttc 19
Query: 102 gaacggagggagta 115
| ||||||||||||
Sbjct: 18 ggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 77 atccatttctacgacaagtaattccgaacggagggagta 115
|||||||||| | ||||||| ||||| ||||||||||||
Sbjct: 83 atccatttctgcaacaagtagttccggacggagggagta 121
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 93.7 bits (47), Expect = 5e-19
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
||||||||||||||||||||||||||| | ||||||||||||| |||||||||| |
Sbjct: 5 tactccctccgttcggaattacttgtcataaaaatggatgtatctataactaaaatacat 64
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagta 115
||||||||| ||||||| ||| ||||||| ||||| |||||||||
Sbjct: 65 ctagatacattcatttcttggacgagtaatttcgaacagagggagta 111
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 70 tagatacatccatttctacgacaagtaattccgaacggagggagtac 116
||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 50 tagatacatccatttttatgacaagtaattccgaacggagggagtac 4
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
|||||| |||||||||||||||||||||| ||||||||| || | |||||||||||| ||
Sbjct: 74 atgtatttagaactaaaatatgtttagatgcatccatttttatgtcaagtaattccggac 15
Query: 106 ggagggagta 115
||||||||||
Sbjct: 14 ggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 gacaagtaattccgaacggagggagta 115
|||||||||||||| ||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 87.7 bits (44), Expect = 3e-17
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
|||||||||||||| ||||||| ||| | || ||||||||||||| |||||||||| |
Sbjct: 111 tactccctccgttccaaattactcgtcgcagaaatggatgtatctataactaaaatacat 52
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggaggga 112
||||||||||||||| | ||| |||||||| |||||||||||
Sbjct: 51 ctagatacatccatttattggacgagtaattcggaacggaggga 8
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 70 tagatacatccatttctacgacaagtaattccgaacggagggagtac 116
||||||||||||||||| |||| ||||||| |||||||||||||||
Sbjct: 66 tagatacatccatttctgcgacgagtaatttggaacggagggagtac 112
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 87.7 bits (44), Expect = 3e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 25 aattacttgtctcggatatggatgtatctagaactaaaatatgtttagatacatccattt 84
||||||| ||| | || |||||||||||||||||||||||| | |||||||||||||
Sbjct: 21 aattactcgtcgctgaaatggatgtatctagaactaaaatacatctagatacatccatac 80
Query: 85 ctacgacaagtaattccgaacggagggagtac 116
| ||||||||||||| |||||||||||||||
Sbjct: 81 gtgcgacaagtaattcggaacggagggagtac 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 111 tactccctccgttccgaattacttgtcgcacgtatggatgtatctaga 64
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 85.7 bits (43), Expect = 1e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 14 cctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttaga 73
|||||||| |||||||| ||||||||| ||||| |||| ||||||||||||| | ||||
Sbjct: 10 cctccgtttggaattacctgtctcggaaatggacgtatttagaactaaaatacatctaga 69
Query: 74 tacatccatttctacgacaagtaattccgaacggagggagtac 116
|| ||| |||| |||||| ||||||||||||||||| ||||
Sbjct: 70 tatatctattttcgcgacaattaattccgaacggagggggtac 112
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| | |||||||||||||| | ||||||||| ||||
Sbjct: 78 atggatgtatctagaactaaaatacatctagatacatccattcccccgacaagtatttcc 19
Query: 102 gaacggagggagtac 116
| |||||||||||||
Sbjct: 18 ggacggagggagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcgggggaatggatgtatctaga 52
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaa 104
|||||||||| |||||||||| || ||||||||| ||||| || |||||||| |||||||
Sbjct: 50 gatgtatctataactaaaataagtctagatacattcatttttaggacaagtatttccgaa 109
Query: 105 cggagggagta 115
|||||||||||
Sbjct: 110 cggagggagta 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 8 ctactccctccgttcggaattacttgtc 35
||||||||||||||||||| ||||||||
Sbjct: 121 ctactccctccgttcggaaatacttgtc 94
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| | |||||||||||||| | ||||||||| ||||
Sbjct: 48 atggatgtatctagaactaaaatacatctagatacatccattcccccgacaagtatttcc 107
Query: 102 gaacggagggagta 115
| ||||||||||||
Sbjct: 108 ggacggagggagta 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctaga 74
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 43 tggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccg 102
|||||||||||| |||||||||| || ||||||||| ||| |||| |||||||| |||||
Sbjct: 48 tggatgtatctataactaaaataagtctagatacattcatctctaggacaagtatttccg 107
Query: 103 aacggagggagtac 116
|||||||||||||
Sbjct: 108 gacggagggagtac 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 77 atccatttctacgacaagtaattccgaacggagggagta 115
|||||||| || |||||||| ||||| ||||||||||||
Sbjct: 43 atccatttttaggacaagtatttccggacggagggagta 5
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| | |||||||||||||| ||| |||||||| ||||
Sbjct: 78 atggatgtatctagaactaaaatacatctagatacatccattcctatgacaagtatttcc 19
Query: 102 gaacggagggagta 115
| |||| |||||||
Sbjct: 18 ggacggcgggagta 5
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 81.8 bits (41), Expect = 2e-15
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
||||||||||||||| ||||||| ||| | || ||||||||||||||||||||||||
Sbjct: 111 ctactccctccgttccaaattactcgtcgctgaaatggatgtatctagaactaaaataca 52
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggagtac 116
| ||||||||||||| | | ||||||||| || |||||||||| ||||
Sbjct: 51 tctagatacatccatatgtgagacaagtaa-tcggaacggagggggtac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 86/103 (83%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 13 ccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttag 72
|||||||||| || ||||||||||| ||||||||||||||||| || || | |||
Sbjct: 9 ccctccgttccga-ttacttgtctcacatatggatgtatctagatgtattttagttctag 67
Query: 73 atacatccatttctacgacaagtaattccgaacggagggagta 115
||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 68 atacatccatttcagcgacgagtaatttggaacggagggagta 110
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
|||||||||||| | |||||||||||| | |||||||| ||||||||||||||| |
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggatgtgtctagaactaaaatacat 64
Query: 69 ttagatacatccatttctacgacaagtaattccgaacggagggagta 115
|||||| ||||||||| | |||||||| || || ||||||||||||
Sbjct: 65 ctagatatatccatttcaatgacaagtattttcggacggagggagta 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 70 tagatacatccatttctacgacaagtaattccgaacggagggagta 115
|||| |||||||||| | |||||||||||| | ||||||||||||
Sbjct: 50 tagacacatccattttgatgacaagtaattctggacggagggagta 5
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| || ||| |||||||||| || |||||||| ||||
Sbjct: 48 atggatgtatctagaactaaaatacgtctaggtacatccattcctctgacaagtatttcc 107
Query: 102 gaacggagggagtac 116
| || ||||||||||
Sbjct: 108 ggacagagggagtac 122
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||| ||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 78 atggatgtatctagaagtaaaatacgtctagatacatccatttctctgacaagtatatcc 19
Query: 102 gaacggagggagtac 116
||||| ||| |||||
Sbjct: 18 gaacgtaggcagtac 4
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||| ||||||| | |||||| || ||||||| ||||||||| ||||
Sbjct: 48 atggatgtatctagaattaaaatacatctagatagattcatttctccgacaagtatttcc 107
Query: 102 gaacggagggagta 115
| ||||||||||||
Sbjct: 108 ggacggagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 77 atccatttctacgacaagtaattccgaacggagggagta 115
|||||||| | ||||||||||||||| || |||||||||
Sbjct: 43 atccatttatgcgacaagtaattccggacagagggagta 5
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 75.8 bits (38), Expect = 1e-13
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 23 ggaattacttgtctcggatatggatgtatctagaactaaaatatgtttagatacatccat 82
||||||||||||| || |||||||||||||||||| ||||| | |||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatctagaactgaaatacatctagatacatccat 38
Query: 83 ttctacgacaagtaattccgaacggagggagtac 116
||| ||||||||| ||| | || ||||||||||
Sbjct: 37 ttccgcgacaagtatttcgggacagagggagtac 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgt 68
||||||||| || | ||| |||||||| |||| ||||||||||||||| || | |
Sbjct: 5 tactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagtt 64
Query: 69 ttagatacatccatttctacgacaagtaattcc 101
||||||||||||||||||||||||||||||||
Sbjct: 65 ctagatacatccatttctacgacaagtaattcc 97
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 69.9 bits (35), Expect = 7e-12
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 46 atgtatctagaactaaaa-tatgtttagatacatccatttctacgacaagtaattccgaa 104
|||||||||||||||||| || ||||||||||||| |||||| ||||| ||| ||||| |
Sbjct: 51 atgtatctagaactaaaaatacgtttagatacatctatttctccgacaggtatttccgga 110
Query: 105 cggagggagta 115
||||||||||
Sbjct: 111 tggagggagta 121
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 79 ccatttctacgacaagtaattccgaacggaggg 111
|||||||||||||||||||||||| | ||||||
Sbjct: 40 ccatttctacgacaagtaattccggatggaggg 8
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 69.9 bits (35), Expect = 7e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
|||||| ||||||||||||| || |||||||||| |||||| |||||||| || || ||
Sbjct: 74 atgtatttagaactaaaatacgtctagatacatcaatttctcagacaagtattttcggac 15
Query: 106 ggagggagtac 116
|||||||||||
Sbjct: 14 ggagggagtac 4
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||||| || ||||||| | ||||||||| ||||||| ||| ||||||||
Sbjct: 48 atggatgtatctacaattaaaatacatctagatacattcatttcttggacgagtaattct 107
Query: 102 gaacggagggagta 115
||||||||||||||
Sbjct: 108 gaacggagggagta 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 7 gctactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||| |||||||| ||| || ||| |||||||||||
Sbjct: 123 gctactccctccgttcagaattactcgtccaagaaatgaatgtatctaga 74
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||||||||||||||||||||| | | ||||||||||| | |||||||||||||
Sbjct: 38 atggatgtatctagaactaaaatacatcttgatacatccataagtgcgacaagtaattcg 97
Query: 102 gaacggaggg 111
||||||||||
Sbjct: 98 gaacggaggg 107
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||| ||||| ||||||||||||| || ||||||||||| | ||||||||| ||||
Sbjct: 78 atggatgcatctaaaactaaaatatgtctaaatacatccattctttcgacaagtatttcc 19
Query: 102 gaacggagggagta 115
| ||||| ||||||
Sbjct: 18 ggacggaaggagta 5
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
|||||| ||||||||||||||||| | |||||||||||||| ||| ||||| || ||||
Sbjct: 78 atggatatatctagaactaaaatacatctagatacatccattcctatgacaaatatttcc 19
Query: 102 gaacggagggagta 115
| || |||||||||
Sbjct: 18 ggacagagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 gacaagtaattccgaacggagggagta 115
|||||||||||||| ||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 25 aattacttgtctcggatatggatgtatctagaactaaaatatgtttagatacatccattt 84
||||||| ||| | || ||| |||||||||||||||||||| |||||||||| ||||
Sbjct: 95 aattactcgtcgcagaaatgaatgtatctagaactaaaatacaactagatacatctattt 36
Query: 85 ctacgacaagtaattccgaacggagggagtac 116
|| |||| | |||||| ||||||||||||||
Sbjct: 35 ctgcgacgaataattcgaaacggagggagtac 4
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 63.9 bits (32), Expect = 5e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgt-ttagatacatccatttctacgacaagtaattc 100
|||||||||||||||||||||||| | || |||||||||||| || |||||||| ||
Sbjct: 48 atggatgtatctagaactaaaatacatctttgatacatccattcctcggacaagtatttt 107
Query: 101 cgaacggagggagtac 116
|| |||||||||||||
Sbjct: 108 cggacggagggagtac 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 77 atccatttctacgacaagtaattccgaacggagggagtac 116
|||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 43 atccatttctgcgacaagtatttccggacggagggagtac 4
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 45 gatgtatctagaactaaaatatgtttagatacatcc 80
|||||||||||||||||||||||| |||||||||||
Sbjct: 85 gatgtatctagaactaaaatatgtctagatacatcc 50
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 63.9 bits (32), Expect = 5e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaa-tatgtttagatacatccatttctacgacaagtaattc 100
|||||||||||||||||||||| | || ||||||||||||||| | || ||||||||||
Sbjct: 39 atggatgtatctagaactaaaaatgcgtctagatacatccatttttgcggcaagtaattc 98
Query: 101 cgaacggaggga 112
|| || ||||||
Sbjct: 99 cggacagaggga 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 70 tagatacatccatttctacgacaagtaattc 100
||||||||||||||||||||| || ||||||
Sbjct: 51 tagatacatccatttctacgagaaataattc 21
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagta 96
||||||||||||| |||||||||| || ||||| ||||||||| || ||||||||
Sbjct: 78 atggatgtatctataactaaaataagtctagattcatccatttttaggacaagta 24
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||||| || ||||||| || |||||||||| | || || |||||||| || |
Sbjct: 78 atggatgtatctataagtaaaataagtctagatacatctacttttaggacaagtattttc 19
Query: 102 gaacggagggagtac 116
||||| |||||||||
Sbjct: 18 gaacgaagggagtac 4
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
||||||||||||||||||||| | ||||||||| |||| ||| | |||||| || || |
Sbjct: 52 atgtatctagaactaaaatatatctagatacatacattcctatgccaagtattttcggat 111
Query: 106 ggagggagtac 116
|||||||||||
Sbjct: 112 ggagggagtac 122
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 71 agatacatccatttctacgacaagtaattccgaacggagggagtac 116
|||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 99 agatacatccatacctgcgacaagtaattcggaacggagggagtac 144
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatct 53
|||||||||||||| |||||||||||| | | |||||||||||||
Sbjct: 143 tactccctccgttccgaattacttgtcgcaggtatggatgtatct 99
Score = 54.0 bits (27), Expect = 4e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 49 tatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaacgga 108
||||||||||||||||| |||| ||| || ||| ||| |||||||||||| ||||| |
Sbjct: 71 tatctagaactaaaatacatttatatatattcatatctgtgacaagtaattcggaacgaa 12
Query: 109 gggagta 115
|||||||
Sbjct: 11 gggagta 5
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||| | |||||||||| ||||||||||| ||| | || |||||||| ||||
Sbjct: 47 atggatgtatccataactaaaataaatttagatacattcatctttaggacaagtatttcc 106
Query: 102 gaacggagggagta 115
| |||| |||||||
Sbjct: 107 ggacggggggagta 120
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||||| |||||||||| | |||||||||||||| | |||||||| ||||
Sbjct: 78 atggatgtatctataactaaaatacatctagatacatccattctttggacaagtatttcc 19
Query: 102 gaacggagggagta 115
| ||| ||||||||
Sbjct: 18 ggacgaagggagta 5
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 80 catttctacgacaagtaattccgaacggagggagt 114
||||||| ||||||||| |||||||||||||||||
Sbjct: 35 catttctccgacaagtatttccgaacggagggagt 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 actccctccgttcggaattacttgtc 35
||||||||||||||||| ||||||||
Sbjct: 1 actccctccgttcggaaatacttgtc 26
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaa 104
|||||||||| |||||||||| || || ||||| ||||||||| | |||||| || | |
Sbjct: 50 gatgtatctataactaaaataagtctacatacaaccatttctagggcaagtattttcaga 109
Query: 105 cggagggagta 115
|||||||||||
Sbjct: 110 cggagggagta 120
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 46 atgtatctagaactaaaatatgtttagatacatcc 80
|||||| ||||||||||||||||||| ||||||||
Sbjct: 84 atgtatttagaactaaaatatgtttaaatacatcc 50
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 54.0 bits (27), Expect = 4e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||||| |||||||||| || |||||| || ||| || ||||||| ||||
Sbjct: 47 atggatgtatctataactaaaataagtctagatatattcatccttagaacaagtatttcc 106
Query: 102 gaacggagggagtac 116
| |||||||||||||
Sbjct: 107 ggacggagggagtac 121
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
|||||||||||||||||||| | |||||||| |||| || | |||||||| || || ||
Sbjct: 74 atgtatctagaactaaaatacatctagatacacccatctcaatgacaagtattttcggac 15
Query: 106 ggagggagta 115
|||||||||
Sbjct: 14 agagggagta 5
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattcc 101
||||||||||||| || || |||| || ||||||||| ||| | || |||||||| ||||
Sbjct: 47 atggatgtatctacaattagaataagtctagatacattcatctgtaggacaagtatttcc 106
Query: 102 gaacggagggagta 115
| ||||||| ||||
Sbjct: 107 ggacggaggtagta 120
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 68 tttagatacatccatttctacgacaagtaattccgaacggagggagtac 116
|||||||||||| |||| || |||||||||||||| | ||||||||||
Sbjct: 71 tttagatacatctatttttatgacaagtaattccggagagagggagtac 119
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tctacgacaagtaattccgaacggagggagta 115
|||| |||||||||||| ||||||||||||||
Sbjct: 36 tctaagacaagtaattcggaacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtct 36
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtct 32
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 8 ctactccctccgttcggaattacttgtctcggat 41
||||||||||||||| |||||||||||| ||||
Sbjct: 132 ctactccctccgttccaaattacttgtcttggat 99
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 89 gacaagtaattccgaacggagggagtac 116
|||||||||||| |||||||||||||||
Sbjct: 31 gacaagtaattcagaacggagggagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtct 36
|||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgttctgaattacttgtct 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 5 aagctactccctccgttcggaattacttgtct 36
|||||||||||||||||| ||||||||||||
Sbjct: 135 aagctactccctccgttccaaattacttgtct 104
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 48 gtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaacgg 107
||||||| || ||||||| | ||||||||| ||| |||| ||||||| ||||||||||
Sbjct: 72 gtatctataattaaaataaatctagatacattcatctctaaaacaagtatttccgaacgg 13
Query: 108 agggagta 115
||| ||||
Sbjct: 12 aggtagta 5
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccattt 84
|||||||||| ||||||||||||| || || |||||| |||||
Sbjct: 48 atggatgtatgtagaactaaaatacgtctaaatacattcattt 90
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 gacaagtaattccgaacggagggagta 115
|||||||||||||| ||||||||||||
Sbjct: 31 gacaagtaattccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtc 35
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaatatgtttagatacatccatttctacgacaagta 96
|||||||||||||||| || |||| | ||||||||| |||| ||| ||||||||
Sbjct: 48 atggatgtatctagaattataatacatctagatacatacattcctatgacaagta 102
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 46 atgtatctagaactaaaatatgtttagatacatcc 80
|||||||||||||||||||| | |||||||||||
Sbjct: 52 atgtatctagaactaaaatacatctagatacatcc 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 89 gacaagtaattccgaacggagggagtacgt 118
|||||||| || ||||||||||||||||||
Sbjct: 31 gacaagtattttcgaacggagggagtacgt 2
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
|||||||||||| ||||||| | ||||||||| ||| ||| ||||| |||||| |||
Sbjct: 42 atgtatctagaattaaaataaatctagatacattcatacctatgacaaataattcgaaac 101
Query: 106 ggagggagta 115
|||| |||||
Sbjct: 102 ggagagagta 111
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 70 tagatacatccatttctacgacaagtaattccgaacggagggagta 115
||||| ||||||||||| ||||||||| |||| ||||||| ||||
Sbjct: 50 tagatgcatccatttctccgacaagtatttccagacggaggaagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 47 tgtatctagaactaaaatatgtttagatacatcc 80
||||||||||||||||||| | |||||||||||
Sbjct: 53 tgtatctagaactaaaatacatctagatacatcc 86
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaatatgtttagatacat 78
|||||| ||||||||||||||| | |||||||||
Sbjct: 51 gatgtacctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 46 atgtatctagaactaaaatatgtttagatacatccatttctacgacaagtaattccgaac 105
|||||| |||||||||||| | |||||||||||||| | ||||||||| || | ||
Sbjct: 52 atgtatttagaactaaaatgcatctagatacatccattctttcgacaagtattttctgac 111
Query: 106 ggagggagta 115
||||||||||
Sbjct: 112 ggagggagta 121
>RF00906;MIR1122;EU730895.1/70118-69993 15368:Brachypodium
distachyon
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 57 actaaaatatgtttagatacat 78
||||||||||||||||||||||
Sbjct: 63 actaaaatatgtttagatacat 42
