miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 141 bits (71), Expect = 3e-33
Identities = 98/108 (90%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
|||||||||||||||||||||||||||| | ||||||||||||||| || ||||||| |
Sbjct: 112 gtactccctccgttcggaattacttgtctcagaaatggatgtatctagacgtattttagt 53
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| ||| |||||| | ||||||||||||||||||||||||||||||
Sbjct: 52 tctagatagatccattttcgagacaagtaattccgaacggagggagta 5
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||||||||||||||||||||||| |||||||| |||||| | || || |
Sbjct: 5 tactccctccgttcggaattacttgtctcgaaaatggatctatctagaactaaaatacgt 64
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| |||||||||| || |||||||||||||||||||||||||||||
Sbjct: 65 ctagatacatccatttctgagacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 139 bits (70), Expect = 1e-32
Identities = 97/107 (90%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||| ||
Sbjct: 111 tactccctccgttctgaattacttgtcgaaaaaatggatgtatctagacatattttagtt 52
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| |||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 51 ctagatacatccatttttgagacaagtaattcggaacggagggagta 5
Score = 69.9 bits (35), Expect = 8e-12
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||||| |||||||||||| | ||||||||||||||| | || ||
Sbjct: 4 gtactccctccgttccgaattacttgtctcaaaaatggatgtatctagaactaaaatatg 63
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| |||||||||| | |||||||||||| ||||||||||||||
Sbjct: 64 tctagatacatccattttttcgacaagtaattcagaacggagggagta 111
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 131 bits (66), Expect = 2e-30
Identities = 96/107 (89%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||| |||||| |||||||||||||| | ||||| ||||||||| | ||||||| ||
Sbjct: 111 tactccatccgtttggaattacttgtcgcagaaatgaatgtatctagatgtattttagtt 52
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 51 ctagatacatccatatccgagacaagtaattccgaatggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 87/108 (80%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||| |||||||||||||||| | ||||||||||||| | || ||
Sbjct: 4 gtactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaataca 63
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| |||||| ||| || | ||||||||||||| |||||| ||||||
Sbjct: 64 tctagatacattcatttctgcgacaagtaattccaaacggatggagta 111
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 115 bits (58), Expect = 1e-25
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||
Sbjct: 111 tactccctccgttcggaattacttgtcgcgaaaatggatgtatctagacgtattttagtt 52
Query: 79 ctanatacatccatatccgagacaagtaattccgaacgg 117
||| ||||||| || | |||||||| |||||||||||||
Sbjct: 51 ctagatacatctattttcgagacaaataattccgaacgg 13
Score = 65.9 bits (33), Expect = 1e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| |||||||||| | || |||||||||||||||||||||||||||
Sbjct: 64 tctagatacatccattttcgcgacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 111 bits (56), Expect = 2e-24
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 22 tccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttanttcta 81
||||||||||||||||||||||||||| ||||||||||||||| |||| ||| | |||||
Sbjct: 8 tccctccgttcggaattacttgtcgtagaaatggatgtatctagacatttttcagttcta 67
Query: 82 natacatccatatccgagacaagtaattccgaacgga 118
|||||||||| | | |||||||||||| |||||||
Sbjct: 68 gatacatccatttatgcgacaagtaattcggaacgga 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 26 tccgttcggaattacttgtcgtanaaatggatgtatcta 64
||||||| ||||||||||||| | |||||||||||||||
Sbjct: 104 tccgttccgaattacttgtcgcataaatggatgtatcta 66
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 89.7 bits (45), Expect = 8e-18
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| |||||||||||| | || ||||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtccggaattacttgacataaaaatggatgcatctaaacatattttagtt 64
Query: 79 ctanatacat 88
||| ||||||
Sbjct: 65 ctaaatacat 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtc 45
|||||||||||| ||||||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtc 95
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 89.7 bits (45), Expect = 8e-18
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| |||||||| ||||| || ||||||||||||||| || ||||||| ||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagtt 62
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 61 ctagatacatccat 48
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatgga 56
|||||||||||| ||||| |||||||||| |||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatgga 42
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 87.7 bits (44), Expect = 3e-17
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||| |||||||| |||| | ||||||||||||||| | ||||||| ||
Sbjct: 5 tactccctccgttctgaattactcgtcgcagaaatggatgtatctagatgtattttagtt 64
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggag 123
|| ||| |||||| || ||||| ||||||| ||||||||||||
Sbjct: 65 ttagatatatccatttctgagacgagtaatttggaacggagggag 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 85/105 (80%)
Strand = Plus / Minus
Query: 21 ctccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttanttct 80
|||||||||||| ||||||| ||| | |||||||| |||||||| || || |||
Sbjct: 109 ctccctccgttccaaattactcgtctcagaaatggatatatctaaaactaaaatacatct 50
Query: 81 anatacatccatatccgagacaagtaattccgaacggagggagta 125
| |||||||||| || | ||| |||||||| ||||||||||||||
Sbjct: 49 agatacatccatttctgcgacgagtaattcagaacggagggagta 5
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 30 ttcggaattacttgtcgtanaaatggatgtatctaaacatattttanttctanatacatc 89
||||||||||||||||| | ||||||||||||||| || ||||| ||||| ||||||
Sbjct: 24 ttcggaattacttgtcgcagaaatggatgtatctagacgagttttagttctagatacatt 83
Query: 90 catatccgagacaagtaattccgaacggagggagta 125
||| | ||| ||||||||||||||| |||||||||
Sbjct: 84 cattttcgaaacaagtaattccgaatagagggagta 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 78 tctanatacatccatatccgagacaagtaattccgaa 114
|||| |||||||||| || | ||||||||||||||||
Sbjct: 60 tctagatacatccatttctgcgacaagtaattccgaa 24
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 83.8 bits (42), Expect = 5e-16
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
|||| ||||||||||||||||| |||||| |||| ||| |||||| | ||||||| |
Sbjct: 112 gtaccccctccgttcggaattaattgtcgcgaaaatagatatatctagatgtattttagt 53
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagg 120
|||| |||| ||||| ||||||||| |||||||| ||||||||
Sbjct: 52 tctaaatacgtccatttccgagacaggtaattccaaacggagg 10
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| || ||||| |||||| | ||||||||||||||| || ||||||| ||
Sbjct: 5 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 64
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 65 ctagatacatccat 78
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 79.8 bits (40), Expect = 8e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatcta 64
|||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgttcggaattacttgtcataaaaatggatgtatcta 50
Score = 75.8 bits (38), Expect = 1e-13
Identities = 89/107 (83%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||||| ||||| ||||||| ||| | ||||| ||||||||| | ||||||| ||
Sbjct: 111 tactccctctgttcgaaattactcgtccaagaaatgaatgtatctagatgtattttagtt 52
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|| |||||||||| | |||||||||||||||||||||||||||
Sbjct: 51 atagatacatccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 22 tccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttanttcta 81
||||||||||| |||||||| ||| | ||||||||||||||| | ||||||| || ||
Sbjct: 8 tccctccgttccgaattactcgtccaataaatggatgtatctagatgtattttagttata 67
Query: 82 natacatccatatccgagacaagtaattccgaacggagggagta 125
|||||||||| || | ||| ||||||| ||||||||||||||
Sbjct: 68 gatacatccatttctgcgacgagtaatttggaacggagggagta 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatcta 64
||||||||||||||| ||||||| |||| | |||||||||||||||
Sbjct: 112 gtactccctccgttccaaattactcgtcgcagaaatggatgtatcta 66
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 77.8 bits (39), Expect = 3e-14
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||||| ||||||||||||| | ||||||||||||| | ||||||| |
Sbjct: 112 gtactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagt 53
Query: 78 tctanatacatccatatccgagacaagtaatt 109
|||| |||||||||| || | ||| |||||||
Sbjct: 52 tctagatacatccatttcagcgacgagtaatt 21
Score = 50.1 bits (25), Expect = 7e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| ||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 64 tctagatacatccatacgtgcgacaagtaattcggaacggagggagta 111
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 75.8 bits (38), Expect = 1e-13
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||||||| |||||||| || ||||| ||||||||| || ||||||| ||
Sbjct: 120 tactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagtt 61
Query: 79 ctanatacatc 89
|| |||||||
Sbjct: 60 atagatacatc 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 gacaagtaattccgaacggagggagta 125
|||||||| ||||||||||||||||||
Sbjct: 94 gacaagtatttccgaacggagggagta 120
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 69.9 bits (35), Expect = 8e-12
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
|||| |||||||||| || ||||||||| | | ||||||||||||| | ||||||| |
Sbjct: 4 gtaccccctccgttccga-ttacttgtctcacatatggatgtatctagatgtattttagt 62
Query: 78 tctanatacatccatatccgagacaagtaattccgaacggagggagta 125
|||| |||||||||| || | ||| ||||||| ||||||||||||||
Sbjct: 63 tctagatacatccatttcagcgacgagtaatttggaacggagggagta 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 84/103 (81%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||| ||||||| |||| ||||||||||||||| | || || |
Sbjct: 110 tactccctccgttccaaattactcgtcgctgaaatggatgtatctagaactaaaatacat 51
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggaggg 121
||| |||||||||||| ||||||||||| || ||||||||||
Sbjct: 50 ctagatacatccatatgtgagacaagtaa-tcggaacggaggg 9
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||| ||||| ||||||||| |||||||||||||| | ||||||| |
Sbjct: 4 gtactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagt 63
Query: 78 tctanatacatccat 92
|||| ||||||||||
Sbjct: 64 tctagatacatccat 78
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||| ||| |||||||| |||||||| | ||||||||||||||| || ||||||| |
Sbjct: 4 gtactgcctacgttcggatatacttgtcagagaaatggatgtatctagacgtattttact 63
Query: 78 tctanatacatccat 92
|||| ||||||||||
Sbjct: 64 tctagatacatccat 78
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| ||||| ||||||||| | ||||| || |||||| | ||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaatt 62
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 61 ctagatacatccat 48
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggat 57
||||||||| || ||||||||||||||| | ||||||||
Sbjct: 5 tactccctctgtccggaattacttgtcgcataaatggat 43
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| ||||| ||||||||| |||||||||||||| | ||||||| ||
Sbjct: 121 tactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagtt 62
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 61 ctagatacatccat 48
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||| ||||| |||||||| || | ||| ||||||||| || ||||||| |
Sbjct: 121 gtactccctccgtccggaaatacttgtcctagagatgaatgtatctagacttattttagt 62
Query: 78 tctanatacatcca 91
| || |||||||||
Sbjct: 61 tatagatacatcca 48
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggat 57
|||||||||||| ||||| |||||||| || ||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggat 43
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||| |||| ||||| |||||||| || |||||||||||||| | ||||||| ||
Sbjct: 5 tactcccgccgtccggaaatacttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 65 ctagatacatccat 78
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 87/107 (81%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| || || |||||||| | |||||||| |||||| | ||||||| ||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggatatatctagatgtattttagtt 52
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| | |||||||| | |||||||||||| | ||||||||||||
Sbjct: 51 ctagacacatccattttgatgacaagtaattctggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatcta 64
|||||||||||| | |||||||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggatgtgtcta 50
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||| || || |||||||| | |||| |||||||||| || ||||||| |
Sbjct: 4 gtactccctccgtccgaaaatacttgtctgagaaattgatgtatctagacgtattttagt 63
Query: 78 tctanatacat 88
|||| ||||||
Sbjct: 64 tctaaatacat 74
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||| |||||||| ||| | ||||| ||||||||| | ||||||| ||
Sbjct: 121 tactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtattttaatt 62
Query: 79 ctanatacatccat 92
|| ||||||||||
Sbjct: 61 gtagatacatccat 48
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttanttctan 82
|||||||||| ||||||||||||| | ||||||||||| | | ||||||| |||||
Sbjct: 107 ccctccgttccgaattacttgtcgcacttatggatgtatcaagatgtattttagttctag 48
Query: 83 atacatccat 92
||||||||||
Sbjct: 47 atacatccat 38
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 58.0 bits (29), Expect = 3e-08
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||| ||||| ||||| ||||||||| | ||||||||||| || |||||||||| ||
Sbjct: 5 tactccttccgtccggaaatacttgtcgaaagaatggatgtatttagacatattttagtt 64
Query: 79 ctanatacatccat 92
|| || |||||||
Sbjct: 65 ttagatgcatccat 78
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 58.0 bits (29), Expect = 3e-08
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
|||||||||| || | ||| ||||||||| ||||||||||||||| | ||||| | |
Sbjct: 4 gtactccctctgtcccgaaatacttgtcgcggaaatggatgtatctagatgtatttcagt 63
Query: 78 tctanatacatccatatccgagacaagtaattcc 111
|||| |||||||||| || |||||||||||||
Sbjct: 64 tctagatacatccatttctacgacaagtaattcc 97
Score = 58.0 bits (29), Expect = 3e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 33 ggaattacttgtcgtanaaatggatgtatcta 64
|||||||||||||||| |||||||||||||||
Sbjct: 97 ggaattacttgtcgtagaaatggatgtatcta 66
>RF00906;MIR1122;EF081030.1/6132-5986 4572:Triticum urartu
Length = 147
Score = 54.0 bits (27), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatct 63
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 144 gtactccctccgttccgaattacttgtcgcaggtatggatgtatct 99
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 83 atacatccatatccgagacaagtaattccgaacggagggagta 125
||||||||||| | | |||||||||||| ||||||||||||||
Sbjct: 101 atacatccatacctgcgacaagtaattcggaacggagggagta 143
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 54.0 bits (27), Expect = 5e-07
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 22 tccctccgttcggaattacttgtcgtanaaatggatgtatctaaacata-ttttanttct 80
|||||| || |||||||||||| || | ||||||||||||||| || | ||||| ||||
Sbjct: 110 tccctctgtccggaattacttgccgcaaaaatggatgtatctagacgcatttttagttct 51
Query: 81 anatacatccat 92
| ||||||||||
Sbjct: 50 agatacatccat 39
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacata-ttttant 77
|||||||||| | ||||| ||| ||||| | |||| ||||||||||||| || ||||| |
Sbjct: 121 tactccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtatttttagt 62
Query: 78 tctanatacat 88
|||| ||||||
Sbjct: 61 tctagatacat 51
Score = 44.1 bits (22), Expect = 4e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtcgtanaaatgg 55
|||||| | ||||||||||||||||| ||||||
Sbjct: 8 ccctccatccggaattacttgtcgtagaaatgg 40
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 54 ggatgtatctaaacatattttanttctanatacatc 89
||||||||||| |||||||||| ||||| |||||||
Sbjct: 50 ggatgtatctagacatattttagttctagatacatc 85
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaa 66
|||||||||| | |||||||||||||| || |||| ||||||||||||
Sbjct: 119 gtactccctctctccggaattacttgtcataaaaatagatgtatctaaa 71
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 50.1 bits (25), Expect = 7e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggat 57
||||||||||||| ||||| ||||||||| | ||||||||
Sbjct: 4 gtactccctccgtccggaaatacttgtcgcagaaatggat 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 63/76 (82%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaa-acatattttan 76
||||||||||||| || || |||||||| | |||||||||||| || | |||||||
Sbjct: 123 gtactccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttag 64
Query: 77 ttctanatacatccat 92
||||| ||||||||||
Sbjct: 63 ttctagatacatccat 48
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 54 ggatgtatctaaacatattttanttctanatacat 88
|||||||| ||||||||||||| ||||| ||||||
Sbjct: 50 ggatgtatttaaacatattttagttctaaatacat 84
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 50.1 bits (25), Expect = 7e-06
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||| |||| ||||| |||||||| || | ||| ||||||||||| ||||||| ||
Sbjct: 120 tactccccccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagtt 61
Query: 79 ctanatacatccat 92
| ||||||||||
Sbjct: 60 atggatacatccat 47
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 50.1 bits (25), Expect = 7e-06
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| || |||||||| || ||||||||| ||||| || ||||||| ||
Sbjct: 5 tactccctccgtctaaaaatacttgtcctaaaaatggatgaatctagacttattttagtt 64
Query: 79 ctanatacatccat 92
|| ||||||||||
Sbjct: 65 atagatacatccat 78
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 50.1 bits (25), Expect = 7e-06
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||| ||| ||||| |||||||| | |||||||||||||| | ||||||| ||
Sbjct: 5 tactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagtt 64
Query: 79 ctanatacatccat 92
|| ||||||||||
Sbjct: 65 atagatacatccat 78
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 50.1 bits (25), Expect = 7e-06
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||||| || ||||| || ||||| || |||||||||||||| | ||||||| ||
Sbjct: 5 tactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagtt 64
Query: 79 ctanatacatccat 92
||| ||| ||||||
Sbjct: 65 ctagatatatccat 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggat 57
|||||||||||| |||||||||||||| | ||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggat 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 gacaagtaattccgaacggagggagta 125
|||||||||||||| ||||||||||||
Sbjct: 95 gacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 98 agacaagtaattccgaacggagggagta 125
||||||||||||| ||||||||||||||
Sbjct: 32 agacaagtaattcggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtc 45
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgttccgaattacttgtc 31
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 actccctccgttcggaattacttgtcgtanaaatg 54
||||||||||||||||| ||||||||| | |||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatg 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 99 gacaagtaattccgaacggagggagt 124
|||||||| |||||||||||||||||
Sbjct: 26 gacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtc 45
||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgttctgaattacttgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 98 agacaagtaattccgaacggagggagta 125
||||||||||||| ||||||||||||||
Sbjct: 32 agacaagtaattcagaacggagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
|||||||||||||| |||||| | |||| | |||| |||||||||| ||||||| |
Sbjct: 4 gtactccctccgtttcgaattattcgtcgcagaaatagatgtatctagttgtattttagt 63
Query: 78 tctanatacatccatatccgagacaagtaatt 109
|||| |||||| ||| || | ||| |||||||
Sbjct: 64 tctagatacattcatttctgcgacgagtaatt 95
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 99 gacaagtaattccgaacggagggagta 125
|||||||||||||| ||||||||||||
Sbjct: 31 gacaagtaattccggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtc 45
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtc 31
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 16 acgtactccctccgttcggaattacttgtcgtanaaatggat 57
|||||||||||||||||| || |||||||| | ||||||||
Sbjct: 2 acgtactccctccgttcgaaaatacttgtcatcaaaatggat 43
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatg 54
||||||||||||| ||||| |||||||| || |||||
Sbjct: 121 gtactccctccgtccggaaatacttgtcataaaaatg 85
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 58/71 (81%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||| | || || |||||| | || |||| ||||||||| | |||||||| |
Sbjct: 122 gtactccctccatccgaaaatacttggcataggaatgtatgtatctagatatattttagt 63
Query: 78 tctanatacat 88
|||| ||||||
Sbjct: 62 tctagatacat 52
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/75 (81%)
Strand = Plus / Minus
Query: 18 gtactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttant 77
||||||||||||| ||||| ||||||| || ||| || |||||| || ||||||| |
Sbjct: 121 gtactccctccgtccggaaatacttgttctaaggatgaatatatctagacttattttagt 62
Query: 78 tctanatacatccat 92
| || ||||||||||
Sbjct: 61 tatagatacatccat 47
