miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 91.7 bits (46), Expect = 2e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagctag 71
|||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 104 atactccctccgtcccgaaataagtgactcaactttgtactaattttgtactaaaaatag 45
Query: 72 tacaaagttg 81
|| |||||||
Sbjct: 44 tataaagttg 35
Score = 52.0 bits (26), Expect = 2e-06
Identities = 86/101 (85%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtg--agtcaactttgtactaatttt-gtactaaagc 68
|||||||||| ||||||||||||||| |||||||| ||||| |||| |||| |||
Sbjct: 4 atactccctccgtcccaaaataagtggatctcaactttatactatttttagtac-aaaat 62
Query: 69 tagtacaaagttgggtcacatattt-gagacggagggagta 108
||||||||||||| ||||| ||||| | |||||||||||||
Sbjct: 63 tagtacaaagttgagtcacttatttcgggacggagggagta 103
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 85/97 (87%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagctagt 72
||||||||| || |||||||| ||| ||||||||||||||||||||||||| || ||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaattttgtactatagttagt 64
Query: 73 acaaagttgggtcacatatttgag-acggagggagta 108
||||||||| |||| ||||| || ||||||||||||
Sbjct: 65 acaaagttgagtcatctattttagaacggagggagta 101
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaattttgtacta 64
|||||||||| |||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgactcaactttgtactaactttgtacta 56
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 24 tcccaaaataagtgagtcaactttgtactaa 54
||||||||||||||| |||||||||||||||
Sbjct: 117 tcccaaaataagtgactcaactttgtactaa 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 64 aaagctagtacaaagttgggtcacata-tttgagacggagggagta 108
|||| ||||||||||||| ||||| || |||| |||||||||||||
Sbjct: 50 aaagttagtacaaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 taatactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagct 69
|||||||||||| ||| |||||||| || |||||||||||| || ||||||||| ||||
Sbjct: 2 taatactccctccgtctcaaaataactgtctcaactttgtac-aactttgtactagagct 60
Query: 70 agtacaaagttg 81
||||||||||||
Sbjct: 61 agtacaaagttg 72
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaa 54
|||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgactcaactttgtactaa 59
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaa 54
|||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 4 atactccctctgtcccaaaataagtgactcaactttgtactaa 46
Score = 54.0 bits (27), Expect = 4e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttgggtcacat-atttgagacggagggagtac 109
|||||||||||| ||||| ||||||| ||||| | ||||| ||||||||||||||
Sbjct: 37 tttgtactaaagttagtataaagttgagtcacttaatttgggacggagggagtac 91
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/75 (86%), Gaps = 4/75 (5%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagctagt 72
||||| ||| |||||||||||||||| ||||||||||||||| || |||||| ||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtactaactt----ctaaagttagt 42
Query: 73 acaaagttgggtcac 87
||||||||| |||||
Sbjct: 41 acaaagttgagtcac 27
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 23 gtcccaaaataagtgagtcaactttgtactaa 54
|||||||| ||||||| |||||||||||||||
Sbjct: 15 gtcccaaagtaagtgactcaactttgtactaa 46
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 85/98 (86%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 13 tactccctcggtcccaaaataagtgagtcaa-ctttgtactaattttgtactaaagctag 71
||||||||| ||||||||||||||| |||| ||| || ||||||||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtg-taattttgtactacagctag 63
Query: 72 tacaaagttgggtcacata-tttgagacggagggagta 108
|||||||||| | ||| || |||| |||||||||||||
Sbjct: 64 tacaaagttgagacacttattttgggacggagggagta 101
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtacta 53
|||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaactttgtacta 61
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 53 aattttgtactaaagctagtacaaagttgggtcacata-tttgagacggagggagtacat 111
|||||||||||| |||||||||||||||| | || || |||| ||||||||||||||||
Sbjct: 45 aattttgtactagagctagtacaaagttgagacagttattttgggacggagggagtacat 104
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||||| |||||||||||| || ||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtacta 61
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 15 ctccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||| ||||||||||||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtacta 45
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 56 tttgtactaaagctagtacaaagttgggtcacata-tttgagacggagggag 106
|||||| ||||||||||||||||||| | ||| || |||| |||||||||||
Sbjct: 58 tttgtattaaagctagtacaaagttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaa-ctttgtactaattttgtactaaagcta 70
|||||||||| ||||||||||||||| |||| ||| |||| || |||||||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtac-aactttgtactaaagtta 62
Query: 71 gtacaaagttg 81
||||||||||
Sbjct: 63 atacaaagttg 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgta 50
||||||||| |||||||||||| || |||||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgta 64
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaa 54
|||||||||| |||||||||||||| |||||||||||||||
Sbjct: 109 atactccctccatcccaaaataagtgtctcaactttgtactaa 67
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttg 81
|||||||||||| |||||||||||||
Sbjct: 55 tttgtactaaagttagtacaaagttg 80
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgta 50
||||||||| |||||||| ||||||| |||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtactaa 54
||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaa 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttgggtcacata-tttgagacggagggagtac 109
|||||||||||| |||||||||||| | ||| || |||| ||||||||||||||
Sbjct: 48 tttgtactaaagttagtacaaagttaagacacttattttgggacggagggagtac 102
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 50.1 bits (25), Expect = 7e-06
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaa-ctttgtactaattttgtactaaagcta 70
|||||||||| ||||||||||||||| |||| ||| |||| |||||| ||||| || ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaaccttagtac-aattttatactagagtta 62
Query: 71 gtacaaagt 79
|||||||||
Sbjct: 63 gtacaaagt 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 11 aatactccctcggtcccaaaataagtgagtcaactttgtactaa 54
||||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 102 aatactccctccgtcccaaaataagtgtctc-actttgtactaa 60
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||||| |||||||||||||| ||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtacta 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 aatactccctcggtcccaaaataagtg 37
||||||||||| |||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtg 37
|||||||||||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtg 78
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 82/100 (82%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagctagt 72
||||||||| || |||||||| ||| |||||||| |||||| ||| ||||| ||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttatactaactttaatataaagttagt 64
Query: 73 acaaagttgggtcacata-tttgagacggagggagtacat 111
| |||||||||||| || |||| |||||||||||||||
Sbjct: 65 aaaaagttgggtcatctattttggaacggagggagtacat 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 80/98 (81%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgtactaattttgtactaaagctagt 72
||||||||| || |||||||| ||| ||||||| |||||| ||| || ||||| ||||
Sbjct: 101 tactccctccgttccaaaatagatgacccaactttttactaactttatattaaagttagt 42
Query: 73 acaaagttgggtcacatatttgaga-cggagggagtac 109
| ||||||| |||| ||||| || ||||||||||||
Sbjct: 41 ataaagttgagtcatctattttggaacggagggagtac 4
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaa 43
|||||||||| |||||||||||||||| ||||
Sbjct: 4 atactccctctgtcccaaaataagtgactcaa 35
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaa 43
|||||||||| |||||||||||||||| ||||
Sbjct: 113 atactccctccgtcccaaaataagtgactcaa 82
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 27 caaaataagtgagtcaactttgtactaa 54
|||||||||||| |||||||||||||||
Sbjct: 19 caaaataagtgattcaactttgtactaa 46
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaa 54
|||||||||| |||||||||||| || |||| ||||||||||
Sbjct: 150 atactccctccgtcccaaaataactgtctcaagtttgtactaa 108
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttgggtca 86
|||||||||||| ||||||||||||| ||||
Sbjct: 37 tttgtactaaagttagtacaaagttgagtca 67
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttgggtca 86
|||||||||||| ||||||||||||| ||||
Sbjct: 37 tttgtactaaagttagtacaaagttgagtca 67
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtactaa 54
|||||||||| || |||||||| ||| |||||||||||||||
Sbjct: 4 atactccctccgttccaaaatagatgactcaactttgtactaa 46
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 80/95 (84%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 16 tccctcggtcccaaaataagtgagtcaa-ctttgtactaattttgtactaaagctagtac 74
||||||||||| |||||||||| | || ||| |||| || ||||||||| ||||| |||
Sbjct: 8 tccctcggtcctaaaataagtgtcttaagcttagtac-aactttgtactagagctaatac 66
Query: 75 aaagttgggtcacatattt-gagacggagggagta 108
||||||| | || ||||| |||||||||||||||
Sbjct: 67 aaagttgagacagttattttgagacggagggagta 101
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaa 43
||||||||| |||||||||||||||| ||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 aatactccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||||||| |||||||||||| || |||||||| |||||
Sbjct: 103 aatactccctccgtcccaaaataactgtctcaactttatacta 61
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 aatactccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||||||| |||||||||||| || |||||||| |||||
Sbjct: 103 aatactccctccgtcccaaaataactgtctcaactttatacta 61
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 61/71 (85%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaa-ctttgtactaattttgtactaaagcta 70
|||||||||| ||||||||||||||| |||| ||| |||| || ||||||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtac-aaccttgtactaaagtta 62
Query: 71 gtacaaagttg 81
||||||||||
Sbjct: 63 atacaaagttg 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtgagtcaactttgta 50
||||||||| |||||||||||| || |||||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgta 64
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;AC148487.14/40672-40806 3880:Medicago truncatula
(barrel medic)
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 91 tttgagacggagggagtacata 112
||||||||||||||||||||||
Sbjct: 22 tttgagacggagggagtacata 1
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtg 77
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttg 81
|||||||||||| |||||||||||||
Sbjct: 37 tttgtactaaagatagtacaaagttg 62
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtga 38
||||||||| ||||||||||||||||
Sbjct: 64 tactccctctgtcccaaaataagtga 39
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 24 tcccaaaataagtgagtcaactttgtacta 53
|||||||||||||| ||||||||||||||
Sbjct: 90 tcccaaaataagtgtctcaactttgtacta 61
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtacta 53
||||||| || ||||||||||||||| |||||||| |||||
Sbjct: 4 atactccatccgtcccaaaataagtgtctcaactttatacta 45
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 103 atactccctctgtcccaaaataagtg 78
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 tactccctcggtcccaaaataagtga 38
||||||||| ||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtga 86
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 tttgtactaaagctagtacaaagttg 81
||||||||| ||||||||||||||||
Sbjct: 48 tttgtactagagctagtacaaagttg 73
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtacta 53
|||||||||| || |||||||||||| |||| |||||||||
Sbjct: 4 atactccctccgttccaaaataagtgtctcaaatttgtacta 45
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtgagtcaactttgtacta 53
|||||||||| | |||||||||||| ||||||||||||||
Sbjct: 102 atactccctctcttccaaaataagtgtctcaactttgtacta 61
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 13 tactccctcggtcccaaaataagtgagt-caactttgtacta 53
||||||||| ||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctccaactttgtacta 46
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 103 atactccctccgtcccaaaataagtg 78
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaata 33
||||||||||||||||||||||
Sbjct: 4 atactccctcggtcccaaaata 25
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaataagtg 37
|||||||||| |||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa
Japonica Group
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 atactccctcggtcccaaaata 33
||||||||||||||||||||||
Sbjct: 4 atactccctcggtcccaaaata 25
