miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 161 bits (81), Expect = 7e-39
Identities = 116/128 (90%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||||||| |||||||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatcaagtca 64
Query: 183 cattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgga 242
| ||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 65 cgttttagtattagatacatccgtatctaggcaaatctaagacaagaattttggaacgga 124
Query: 243 gggagtat 250
|| |||||
Sbjct: 125 ggaagtat 132
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 196 gatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||||||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttgggacggagggagta 5
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 145 bits (73), Expect = 4e-34
Identities = 117/132 (88%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtc 181
||||||| || ||| |||||||||| ||||| |||| |||||||| ||||||| || ||
Sbjct: 4 atactccttctgtcccaaaattcttgtcttagatttttctaaatagggatgtatcaactc 63
Query: 182 acattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
|| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 64 acgttttagtattagatacatccatatctagacaaatctaagacaagaattttgggacgg 123
Query: 242 agggagtattta 253
||||||||||||
Sbjct: 124 agggagtattta 135
Score = 61.9 bits (31), Expect = 5e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 196 gatacatccgtatctagataaatctaagacaagaattttaggacggagggagtat 250
||||||||| ||| |||| |||||||||||||||||||| |||| || |||||||
Sbjct: 58 gatacatccctatttagaaaaatctaagacaagaattttgggacagaaggagtat 4
Score = 61.9 bits (31), Expect = 5e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtat 175
|||||||||||||| |||||||||| ||||| ||||||||| ||| |||||||
Sbjct: 132 atactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtat 79
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 143 bits (72), Expect = 2e-33
Identities = 113/127 (88%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||| ||| |||||||||| ||||| ||||||||| |||| ||||||| ||||||
Sbjct: 5 tactccctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatcaagtca 64
Query: 183 cattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgga 242
|||||| ||||||||||||| ||||||||| |||||||||||||||| ||| |||| ||
Sbjct: 65 cattttcgtattagatacatctgtatctagacaaatctaagacaagaaatttgggacaga 124
Query: 243 gggagta 249
|||||||
Sbjct: 125 gggagta 131
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 196 gatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
|||||||||||||||||| |||||||||||||||||||| |||| |||||||||
Sbjct: 58 gatacatccgtatctagacaaatctaagacaagaattttgggaccgagggagta 5
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 137 bits (69), Expect = 9e-32
Identities = 113/128 (88%)
Strand = Plus / Minus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
|||||||||| || |||||||||| ||||| |||||||||||||| ||||||| ||||||
Sbjct: 131 tactccctccatcccaaaattcttgtcttagatttgtctaaatacggatgtatgaagtca 72
Query: 183 cattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgga 242
|||||| ||||| |||||| ||||||||| |||| ||||||||||||||| ||||||
Sbjct: 71 tattttagtattaaatacatatgtatctagacaaatgtaagacaagaattttgagacgga 12
Query: 243 gggagtat 250
||||||||
Sbjct: 11 gggagtat 4
Score = 89.7 bits (45), Expect = 2e-17
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtc 181
||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| | |
Sbjct: 4 atactccctccgtctcaaaattcttgtcttacatttgtctagatacatatgtatttaata 63
Query: 182 acattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
| || | | |||||||||||| |||| |||||||||||||||||||| ||| ||
Sbjct: 64 ctaaaatatgacttcatacatccgtatttagacaaatctaagacaagaattttgggatgg 123
Query: 242 agggagta 249
||||||||
Sbjct: 124 agggagta 131
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 133 bits (67), Expect = 1e-30
Identities = 114/130 (87%)
Strand = Plus / Plus
Query: 120 ttatactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaag 179
||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| ||
Sbjct: 2 ttatactccctccatctcaaaattctggtcttaaatttctctaaatatggatgtatctag 61
Query: 180 tcacattttaatattagatacatccgtatctagataaatctaagacaagaattttaggac 239
|||| ||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 62 tcacgttttagtgttagatacatccgtatctagataaatcctagacaagaattttgggac 121
Query: 240 ggagggagta 249
||||| ||||
Sbjct: 122 ggaggtagta 131
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtat 250
||||||||||| ||| |||| |||| |||||| |||||||| || |||||||||||
Sbjct: 60 tagatacatccatatttagagaaatttaagaccagaattttgagatggagggagtat 4
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 123 bits (62), Expect = 1e-27
Identities = 114/132 (86%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtc 181
|||||||||||||| |||||||||| || || |||||||||||||| ||||||| ||||
Sbjct: 4 atactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagtc 63
Query: 182 acattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
| ||||| | ||||| |||| | |||||| | ||||||||||| |||||||| ||||||
Sbjct: 64 atgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacgg 123
Query: 242 agggagtattta 253
||||||||||||
Sbjct: 124 agggagtattta 135
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtattt 252
||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||||
Sbjct: 60 tagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagtattt 2
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 121 bits (61), Expect = 6e-27
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||||||| ||||||| || ||||| ||||||||||||| ||||||| ||| |
Sbjct: 5 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 64
Query: 183 cattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgga 242
||||||| | ||||||||||||||||||| | |||| ||||||||||||||| ||| |||
Sbjct: 65 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 124
Query: 243 ggga 246
||||
Sbjct: 125 ggga 128
Score = 58.0 bits (29), Expect = 7e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 197 atacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
|||||||| ||| |||| |||| |||||||| |||||| ||||||||||||||
Sbjct: 57 atacatccatatttagacaaatttaagacaacaattttgggacggagggagta 5
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 113 bits (57), Expect = 1e-24
Identities = 104/120 (86%)
Strand = Plus / Minus
Query: 127 ccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtcacatt 186
||||||||| |||||||||| ||||| |||||||||||||| ||||||| ||| |||||
Sbjct: 127 ccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagttacatt 68
Query: 187 ttaatattagatacatccgtatctagataaatctaagacaagaattttaggacggaggga 246
||| | ||||||||||| |||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 67 ttagtgttagatacatctttatctaaacaaatgtaagacaagaattttgggatggaggga 8
Score = 71.9 bits (36), Expect = 5e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggaggg 245
||||||||||||||| |||| |||| ||||||||||||||| ||||||||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttgggacggaggg 127
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 111 bits (56), Expect = 5e-24
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 139 aaattcttctcttanatttgtctaaatacagatgtattaagtcacattttaatattagat 198
|||||||| ||||| ||||||||||| || |||||| ||||||| |||| ||||||||
Sbjct: 21 aaattcttgtcttaaatttgtctaaagacgaatgtatcaagtcacgtttttgtattagat 80
Query: 199 acatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||||||||| ||| ||| ||||||||||| ||||||||||||||
Sbjct: 81 acatccgtatctagacaaagctacaacaagaattttgggacggagggagta 131
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 196 gatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||| ||| | |||| |||| |||||||||||||| ||||||||| |||||
Sbjct: 58 gatacattcgtctttagacaaatttaagacaagaatttcaggacggagcgagta 5
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 93.7 bits (47), Expect = 1e-18
Identities = 113/134 (84%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 120 ttatactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaag 179
||||||||||||||| |||||||||| ||||| |||||| || ||| |||||| ||
Sbjct: 2 ttatactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctag 61
Query: 180 tcacattttaatatt-agatacatccgtatctagataaatctaagacaagaattttagga 238
| | ||||| |||| ||||||||| | |||||| ||| ||||||||||||||||||||
Sbjct: 62 ttaagttttagtatttagatacatcaatttctagacaaagctaagacaagaattttagga 121
Query: 239 cggagggagtattt 252
||||||||||||||
Sbjct: 122 cggagggagtattt 135
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtat 250
||||||||| | |||||| | |||||||||||||||||||| | |||||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaagaattttggaacggagggagtat 4
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 91.7 bits (46), Expect = 5e-18
Identities = 109/129 (84%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||||||||||||||| || | || ||||||||| ||| ||||||| ||| |
Sbjct: 5 tactccctccgtctcaaaattattgttttgaatttgtctagatatggatgtatctagtta 64
Query: 183 cattttaatatt-agatacatccgtatctagataaatctaagacaagaattttaggacgg 241
||||||| |||| | || ||||| |||||| | | |||||||||||||||||| ||||||
Sbjct: 65 cattttagtatttaaatgcatccatatctaaaaacatctaagacaagaattttgggacgg 124
Query: 242 agggagtat 250
|||||||||
Sbjct: 125 agggagtat 133
Score = 48.1 bits (24), Expect = 7e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||||| |||||||| |||| || |||| |||||| |||||||||||||
Sbjct: 60 tagatacatccatatctagacaaattcaaaacaataattttgagacggagggagta 5
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 122 atactccctccgtctcaaaattcttctctta 152
|||||||||||||| |||||||||| |||||
Sbjct: 133 atactccctccgtcccaaaattcttgtctta 103
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 85.7 bits (43), Expect = 3e-16
Identities = 112/134 (83%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 120 ttatactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaag 179
||||||| ||||||| |||||||||| ||||| |||||| || ||| |||||| ||
Sbjct: 135 ttatactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctag 76
Query: 180 tcacattttaatatt-agatacatccgtatctagataaatctaagacaagaattttagga 238
| | ||||| |||| ||||||||| | |||||| ||| ||||||||||||||||||||
Sbjct: 75 ttaagttttagtatttagatacatcaatttctagacaaagctaagacaagaattttagga 16
Query: 239 cggagggagtattt 252
||||||||||||||
Sbjct: 15 cggagggagtattt 2
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtat 250
||||||||| | |||||| | |||||||||||||||||||| | ||||||| |||||
Sbjct: 77 tagatacattcatatctaaacaaatctaagacaagaattttggaacggaggtagtat 133
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 192 attagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtatt 251
||||||||||| | |||||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct: 62 attagatacattcatatctagacaaatctaagacaagaattttatgacagagggagtatt 3
Query: 252 t 252
|
Sbjct: 2 t 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 108/132 (81%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtc 181
|||||||||| ||| ||||||||| ||||| ||||||||| ||| |||||| | ||
Sbjct: 4 atactccctctgtcataaaattcttgtcttagatttgtctagatatgaatgtatctaatc 63
Query: 182 acattttaatatt-agatacatccgtatctagataaatctaagacaagaattttaggacg 240
|| |||| | ||| ||||||| || | | |||| ||| ||||||||||| ||||| ||||
Sbjct: 64 acgttttgacatttagatacaaccatttttagacaaacctaagacaagatttttaagacg 123
Query: 241 gagggagtattt 252
||||||||||||
Sbjct: 124 gagggagtattt 135
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 206 tatctagataaatctaagacaagaattttaggacggagggagtat 250
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 48 tatctagacaaatctaagacaagaattttaggacggagggagtat 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtcta 162
|||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 4 atactccctccgtcctaaaattcttgtcttagatttgtcta 44
Score = 46.1 bits (23), Expect = 3e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 193 ttagatacatccgtatctagataaatctaagacaagaattttaggacggag 243
|||||||||| | | |||||||||| |||| ||||||||||| |||||||
Sbjct: 63 ttagatacattcatttctagataaacctaatacaagaattttgagacggag 113
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 81.8 bits (41), Expect = 5e-15
Identities = 107/128 (83%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||||||| |||||||||| ||||| ||||||||| ||| |||||| |||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatctagtca 64
Query: 183 cattttaata-ttagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
| ||||| || || |||||||| | |||| | ||| ||||||||||||||| ||||||
Sbjct: 65 cgttttagtattttgatacatctatttctaaacaaacttaagacaagaattttgggacgg 124
Query: 242 agggagta 249
||||||||
Sbjct: 125 agggagta 132
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| | |||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct: 60 tagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagta 5
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 202 tccgtatctagataaatctaagacaagaattttaggacggagggagta 249
|||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 54 tccgtatctaaataaatctaagacaagaattttgggacggagggagta 101
Score = 71.9 bits (36), Expect = 5e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 199 acatccgtatctagataaatctaagacaagaatttt 234
||||||||||||||||||||||||||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaatttt 19
Score = 48.1 bits (24), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 123 tactccctccgtctcaaaattcttctcttanattt 157
||||||||||||| |||||||||| ||||| ||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagattt 67
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 193 ttagatacatccgtatctagataaatctaagacaagaattttaggacggagg 244
|||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 44 ttagatacatccgtatctagataaatctaagacaagctttttgggacggagg 95
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 75.8 bits (38), Expect = 3e-13
Identities = 108/129 (83%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
|||||||||||||||||||||||| |||| |||||| || |||| |||||| |||||
Sbjct: 5 tactccctccgtctcaaaattcttgccttatatttgtttagatacgaatgtatctagtca 64
Query: 183 cattttaata-ttagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
| |||| || |||||||||||| |||||| ||| |||||||||||||||| | | ||
Sbjct: 65 -aatttagtatttagatacatccagttctagacaaagctaagacaagaattttggaatgg 123
Query: 242 agggagtat 250
|||||||||
Sbjct: 124 agggagtat 132
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| |||||||| | |||| |||| |||||||||| |||||||||||||
Sbjct: 60 tagatacattcgtatctaaacaaatataaggcaagaattttgagacggagggagta 5
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 73.8 bits (37), Expect = 1e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 65 gtagattcactcattttgctttgtatgtagtccatagnggaatctttacacaaacttata 124
||||||||||||||||||||| ||||||||||||||| | ||||| |||| | |||||||
Sbjct: 83 gtagattcactcattttgcttcgtatgtagtccatagtgaaatctctacagagacttata 142
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagt 30
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 161 tactccctccgttcctaaatataagt 136
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 69.9 bits (35), Expect = 2e-11
Identities = 107/130 (82%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
|||||| |||||| |||||||||| ||||| ||||||||| ||| |||||| |||||
Sbjct: 5 tactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatctagtca 64
Query: 183 cattttaatatt-agatacatccgtatctagataaatctaagacaagaattttaggacgg 241
|||| |||| |||||||||| | | |||| || |||||||||||||||| | ||||
Sbjct: 65 tggtttagtatttagatacatccatgtgtagacaatgctaagacaagaattttggaacgg 124
Query: 242 agggagtatt 251
||||||||||
Sbjct: 125 agggagtatt 134
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| | ||| |||| |||| ||||||||||||||| ||||||| ||||||
Sbjct: 60 tagatacattcatatatagacaaatttaagacaagaattttgggacggaaggagta 5
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 197 atacatccgtatctagataaatctaagacaagaattttaggacggagggagtatt 251
|||||| | |||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttgggacggagggagtatt 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 110/136 (80%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 122 atactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtc 181
|||||||||||||| |||| ||||| ||||| ||||||||| ||| |||||| ||||
Sbjct: 4 atactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtatgtagtc 63
Query: 182 acattttaatatt-agataca------tccgtatctagataaatctaagacaagaatttt 234
|| |||| |||| ||||||| ||| | | |||| ||| ||||||||||||||||
Sbjct: 64 acgttttggtatttagatacacctacatccatttatagacaaacctaagacaagaatttt 123
Query: 235 aggacggagggagtat 250
|||||||||||||||
Sbjct: 124 gggacggagggagtat 139
Score = 58.0 bits (29), Expect = 7e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 119 cttatactccctccgtctcaaaattcttctcttanatttgtcta 162
||||||||||||||||| |||||||||| ||||| ||||||||
Sbjct: 142 cttatactccctccgtcccaaaattcttgtcttaggtttgtcta 99
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 69.9 bits (35), Expect = 2e-11
Identities = 96/114 (84%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 137 caaaattcttctcttanatttgtctaaatacagatgtattaagtcacattttaata-tta 195
|||||||||| ||||| ||||||||||||| |||||| ||||| ||||| || |||
Sbjct: 19 caaaattcttgtcttagatttgtctaaatatgaatgtatctagtcatgttttagtattta 78
Query: 196 gatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| | |||||| ||| ||||||||||||||| |||||||| |||||
Sbjct: 79 gatacatccatttctaga-caatttaagacaagaattttgggacggagagagta 131
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggac 239
||||||||| | ||| |||| |||||||||||||||||||| ||||
Sbjct: 60 tagatacattcatatttagacaaatctaagacaagaattttgggac 15
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 67.9 bits (34), Expect = 7e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 193 ttagatacatccgtatctagataaatctaagacaagaattttaggacggagggagtat 250
|||||||||||||||||||||||||||| ||||||| || | ||||||||| |||||
Sbjct: 61 ttagatacatccgtatctagataaatcttagacaagctttctgggacggaggtagtat 4
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 205 gtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct: 53 gtatctagacaaatctaagacaagaattttaagatggagggagta 97
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 206 tatctagataaatctaagacaagaattttaggacggagggagtattt 252
|||| ||| |||||||||||||||||||| | ||| |||||||||||
Sbjct: 48 tatcaagacaaatctaagacaagaattttggaacgaagggagtattt 2
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 63.9 bits (32), Expect = 1e-09
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
|||||||||||| |||| | ||| |||| ||||||||| |||| ||||||| || |
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctagact 72
Query: 183 cattttaatattagatacatccgtatctagataaatctaagacaagaattttaggacgga 242
||||||| | |||||| |||||||||||| |||||||||||||| | || | |||||
Sbjct: 71 cattttagtgctagatatctccgtatctagacaaatctaagacaagtaattcggaacgga 12
Query: 243 gggagta 249
|||||||
Sbjct: 11 gggagta 5
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
|||||||||||||||||||| ||||| |||||||| | ||| | ||||||||||||
Sbjct: 76 tagatacatccgtatctagacaaatccaagacaagtaatttggaacggagggagta 131
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
|||||||||||||||||||| |||| ||||||||| | || || ||||||||||||
Sbjct: 60 tagatacatccgtatctagacaaatttaagacaagtaattcagaacggagggagta 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 148 tcttanatttgtctaaatacagatgtattaagtcacattttaatattagatacatccgta 207
||||| ||||||||| |||| ||||||| || | ||||||| | |||| | ||| |||
Sbjct: 30 tcttaaatttgtctagatacggatgtatctagactcattttagtgctagacatatctgta 89
Query: 208 tctagataaatctaagacaagaattttaggacggagggagta 249
|||||| ||||| |||||||| | ||| | ||||||||||||
Sbjct: 90 tctagacaaatcgaagacaagtaatttggaacggagggagta 131
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 194 tagatacatccgtatctagataaatctaagacaagaattttaggacggagggagta 249
||||||||| | |||||| | ||||||||||||| |||||| ||||||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaataattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 5e-09
Identities = 106/130 (81%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 123 tactccctccgtctcaaaattcttctcttanatttgtctaaatacagatgtattaagtca 182
||||||||||||| ||||||| || ||||| |||||| || ||| |||||| |||||
Sbjct: 5 tactccctccgtcccaaaattattgtcttagatttgtttagatatgaatgtatctagtca 64
Query: 183 cattttaata-ttagatacatccgtatctagataaatctaagacaagaattttaggacgg 241
||||| || ||||||||||| | |||| | ||| ||||||||||||||| |||||
Sbjct: 65 agttttagtaattagatacatctatttctaaacaaagttaagacaagaattttgggacga 124
Query: 242 agggagtatt 251
||||||||||
Sbjct: 125 agggagtatt 134
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 actactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||||
Sbjct: 3 actactccctccgttcctaaatataagt 30
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagt 140
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 aactactccctccgttcctaaatataag 38
||||||||||||||||||||||||||||
Sbjct: 2 aactactccctccgttcctaaatataag 29
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataag 38
|||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataag 142
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 56.0 bits (28), Expect = 3e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 67 agattcactcattttgctttgtatgtagtccatagnggaatct 109
|||||||||||||||||| ||||||||||||||| | |||||
Sbjct: 81 agattcactcattttgctccgtatgtagtccatagtgtaatct 39
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagt 30
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 166
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 aactactccctccgttcctaaatataag 38
||||||||||||||||||||||||||||
Sbjct: 1 aactactccctccgttcctaaatataag 28
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 65 gtagattcactcattttgctttgtatgtagtccata 100
|||||||||||||||||||| ||||||||||||||
Sbjct: 83 gtagattcactcattttgctccgtatgtagtccata 48
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagt 141
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 13 ctactccctccgttcctaaatataagt 39
|||||||||||||||||||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagt 139
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagt 26
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 13 ctactccctccgttcctaaatataagt 39
|||||||||||||||||||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagt 139
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagt 26
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 tagattcactcattttgctttgtatgtagtc 96
||||||||||||||||||| ||||||||||
Sbjct: 86 tagattcactcattttgctccgtatgtagtc 116
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 12 actactccctccgttcctaaatataag 38
|||||||||||||||||||||||||||
Sbjct: 165 actactccctccgttcctaaatataag 139
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ctactccctccgttcctaaatataag 38
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgttcctaaatataag 26
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum
(bread wheat)
Length = 167
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatataagt 27
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagt 30
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 151 tactccctccgttcctaaatataagt 126
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagt 140
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataagt 39
||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagt 113
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ctactccctccgttcctaaatataag 38
||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatataag 29
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 aactactccctccgttcctaaatataagt 39
|||||||||||||||||| ||||||||||
Sbjct: 2 aactactccctccgttccaaaatataagt 30
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataag 38
|||||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataag 25
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 tagattcactcattttgctttgtatgtagtc 96
||||||||||||||||||| ||||||||||
Sbjct: 85 tagattcactcattttgctccgtatgtagtc 115
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatataag 38
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataag 29
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataag 38
|||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
Japonica Group
Length = 121
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 aaactactccctccgttcctaaatataag 38
|||||||| ||||||||||||||||||||
Sbjct: 1 aaactacttcctccgttcctaaatataag 29
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 246 agtatttaggaacggagggagtac 269
||||||||||||||||||||||||
Sbjct: 78 agtatttaggaacggagggagtac 101
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 246 agtatttaggaacggagggagtac 269
||||||||||||||||||||||||
Sbjct: 27 agtatttaggaacggagggagtac 4
>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 aactactccctccgttcctaaatataag 38
||||||||||||||| ||||||||||||
Sbjct: 2 aactactccctccgtccctaaatataag 29
>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 7e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 aactactccctccgttcctaaatataag 38
||||||||||||||| ||||||||||||
Sbjct: 2 aactactccctccgtccctaaatataag 29
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatataa 37
||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92
>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
Japonica Group
Length = 102
Score = 48.1 bits (24), Expect = 7e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 actccctccgttcctaaatataag 38
||||||||||||||||||||||||
Sbjct: 6 actccctccgttcctaaatataag 29
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 46.1 bits (23), Expect = 3e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 218 tctaagacaagaattttaggacggagggagtattt 252
|||| |||||| ||||| |||||||||||||||||
Sbjct: 36 tctacgacaagtattttgggacggagggagtattt 2
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 120 ttatactccctccgtctcaaaat 142
|||||||||||||||||||||||
Sbjct: 104 ttatactccctccgtctcaaaat 82
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 230 attttaggacggagggagtattt 252
|||||||||||||||||||||||
Sbjct: 83 attttaggacggagggagtattt 105
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgttcctaaatata 36
|||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 246 agtatttaggaacggagggagta 268
|||||||||||||||||||||||
Sbjct: 68 agtatttaggaacggagggagta 90
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 246 agtatttaggaacggagggagta 268
|||||||||||||||||||||||
Sbjct: 68 agtatttaggaacggagggagta 90
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
Group
Length = 110
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 actactccctccgttcctaaatataag 38
|||||||||||||| ||||||||||||
Sbjct: 108 actactccctccgtccctaaatataag 82
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 actactccctccgttcctaaatataag 38
|||||||||||||| ||||||||||||
Sbjct: 154 actactccctccgtccctaaatataag 128
>RF00906;MIR1122;AAAA02019740.1/10862-10702 39946:Oryza sativa
Indica Group
Length = 161
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 120 ttatactccctccgtctcaaaat 142
|||||||||||||||||||||||
Sbjct: 160 ttatactccctccgtctcaaaat 138
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 actactccctccgttcctaaatataag 38
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 3e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 actactccctccgttcctaaatataag 38
|||||||||||||| ||||||||||||
Sbjct: 3 actactccctccgtccctaaatataag 29
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 46.1 bits (23), Expect = 3e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgttcctaaatata 36
|||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatata 27
