miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 157 bits (79), Expect = 8e-38
Identities = 146/167 (87%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 22 tctactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatac 81
|||||||||||||||||||||||| |||||| |||||||||| | ||||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 107
Query: 82 ggagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggtaat 141
||||||||||||||||||||| ||||||||||||||||||||||||||| |||| || |
Sbjct: 106 ggagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagt-ct 48
Query: 142 ccatttgaaacctctaaaaagacaaatatttaggaacggaggtagta 188
| |||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 47 actagtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttca 65
|||||||||||||||||||||| |||||| ||||| |||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttca 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 148 gaaacctctaaaaagacaaatatttaggaacggaggtagtag 189
|||| |||||||||||| ||||||||||||||||| |||||
Sbjct: 124 gaaatctctaaaaagacttatatttaggaacggagggagtag 165
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 135 bits (68), Expect = 3e-31
Identities = 144/166 (86%), Gaps = 5/166 (3%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
||||||||| |||||||||||| |||||| |||||||| || | | ||||||||||||
Sbjct: 5 tactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacgg 63
Query: 84 agcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggtaatcc 143
||||||||||||||||||||| ||||||||| |||||||| ||||||||||| || ||
Sbjct: 64 agcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagt---cc 120
Query: 144 at-ttgaaacctctaaaaagacaaatatttaggaacggaggtagta 188
|| || ||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 121 atattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||||| ||||||||| || | | ||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaatatg-gactacatacgg 108
Query: 84 a 84
|
Sbjct: 107 a 107
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 125 bits (63), Expect = 3e-28
Identities = 143/168 (85%), Gaps = 5/168 (2%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||||| || ||||||| | || ||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 84 agcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggtaatcc 143
|||||||||| ||||| |||| |||||| ||||||||||||||||||||||| || ||
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagt---cc 117
Query: 144 att--tgaaacctctaaaaagacaaatatttaggaacggaggtagtag 189
||| ||||| ||||| |||||| ||||||||||||||||| |||||
Sbjct: 118 attagtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacg 82
||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
Query: 83 ga 84
||
Sbjct: 105 ga 104
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 105 bits (53), Expect = 2e-22
Identities = 139/165 (84%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||| | |||||| |||||||||| ||| | ||||||| ||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 84 agcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggtaatcc 143
|||||||||||||||||| | ||| || ||||||||||||||||||||||| || ||
Sbjct: 63 agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagt-cccc 120
Query: 144 atttgaaacctctaaaaagacaaatatttaggaacggaggtagta 188
|||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 121 tagtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||||| |||| ||||| | | ||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106
Query: 84 a 84
|
Sbjct: 105 a 105
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 72 gactacatacggagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgt 131
||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct: 115 gactacatacggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgt 56
Query: 132 atgt 135
||||
Sbjct: 55 atgt 52
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatat 22
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 72 gactacatacggagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgt 131
||||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||
Sbjct: 118 gactacatacggagcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgt 59
Query: 132 atgt 135
||||
Sbjct: 58 atgt 55
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 3 ctactccctccgttcctaaatat 25
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 91.7 bits (46), Expect = 4e-18
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||| | ||||||||||| | | |||||||||||
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacatacga 103
Query: 84 agcaaaatgagtgaatctacattctaaaat 113
||||||||||||||||||||| ||||||||
Sbjct: 102 agcaaaatgagtgaatctacactctaaaat 73
Score = 54.0 bits (27), Expect = 8e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatt 62
|||||||||||||||||||||| |||||| ||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagatt 43
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 97/113 (85%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacg 82
||||||||||||||||||||||| | | || || | |||||| | | |||||||||||
Sbjct: 164 ctactccctccgttcctaaatataagaccttttacaaatttca-ctatagactacatacg 106
Query: 83 gagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgt 135
||||||||||||||||| ||||| | |||||||| ||| ||||||||||||||
Sbjct: 105 gagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgt 53
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 1 ctactccctccgttcctaaatat 23
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 87.7 bits (44), Expect = 6e-17
Identities = 100/116 (86%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacg 82
||||||||||||||||||||||| |||||| ||||||||| || | ||| |||||||
Sbjct: 4 ctactccctccgttcctaaatataagtctttggagagatttc-actatagaccacatacg 62
Query: 83 gagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggt 138
||| |||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 63 gagaaaaatgagtgaatctaca-cataaaatgcatctatatacatccgtatgtggt 117
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatat 144
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 83.8 bits (42), Expect = 9e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||||| |||||||| || | | ||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 84 agcaaaatgagtgaatct 101
||||||||||||||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 153 ctctaaaaagacaaatatttaggaacggaggtagta 188
|||||||||||| ||||||||||||||||| ||||
Sbjct: 40 ctctaaaaagacttatatttaggaacggagggagta 5
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 79.8 bits (40), Expect = 1e-14
Identities = 137/166 (82%), Gaps = 5/166 (3%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||||||||||||| |||||| | |||||||| | | ||| ||||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 84 agcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggtaatcc 143
|| |||||||||||| ||| | |||||||| |||| |||||||||||||||| |||
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtgg---tcc 117
Query: 144 at-ttgaaacctctaaaaagacaaatatttaggaacggaggtagta 188
|| ||||| ||||| |||||| ||||||||||| ||||| ||||
Sbjct: 118 atagtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttca 65
|||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttca 122
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 67.9 bits (34), Expect = 5e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaa 69
||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 100 tactccctccgttcctaaatacttgtctttctaggcatttcaacaa 55
Score = 54.0 bits (27), Expect = 8e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaa 66
|||||||||| || |||||||||||||||||||| |||||||
Sbjct: 5 tactccctccatttttaaatatttgtctttctagacatttcaa 47
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 159 aaagacaaatatttaggaacggaggtagta 188
|||||||| |||||||||||||||| ||||
Sbjct: 71 aaagacaagtatttaggaacggagggagta 100
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 58.0 bits (29), Expect = 5e-08
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagt-gactacatacg 82
|||||||||||||||||||||| |||||| ||| |||||| | ||| | |||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttca-ctagtagtctacatacg 93
Query: 83 gagcaaaatgagt 95
|||||||||||||
Sbjct: 92 gagcaaaatgagt 80
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatat 26
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 107 ctaaaatatgtctatatacatccgtatgt 135
|||||||||||||||||||||||||||||
Sbjct: 87 ctaaaatatgtctatatacatccgtatgt 115
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatat 145
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttca 65
|||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttca 46
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 21 ttctactccctccgttcctaaatatttgtc 50
|||||||||||||||||||||||| |||||
Sbjct: 93 ttctactccctccgttcctaaatacttgtc 64
>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
Group
Length = 249
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttg 48
|||||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatatttg 224
>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
Japonica Group
Length = 239
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttg 48
|||||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatatttg 214
>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttg 48
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatatttg 26
>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttg 48
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatatttg 216
>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
Length = 238
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttg 48
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatatttg 26
>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
Group
Length = 224
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatattt 47
||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatattt 25
>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
Group
Length = 244
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatattt 47
||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatattt 25
>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
Japonica Group
Length = 247
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatattt 47
||||||||||||||||||||||||
Sbjct: 2 tactccctccgttcctaaatattt 25
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 48.1 bits (24), Expect = 5e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
|||||||||||| | ||||||| |||||| ||| |||||| | ||| ||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 84 agcaaaat 91
||||||||
Sbjct: 65 agcaaaat 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtctttc 54
|||||||||||||||||||||| |||||||
Sbjct: 138 tactccctccgttcctaaatataagtctttc 108
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa
Indica Group
Length = 240
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 actccctccgttcctaaatattt 47
|||||||||||||||||||||||
Sbjct: 3 actccctccgttcctaaatattt 25
>RF01058;MIR806;AAAA02001246.1/1874-2105 39946:Oryza sativa Indica
Group
Length = 232
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtc 50
|||||||||||| ||||||||||||||
Sbjct: 231 tactccctccgtccctaaatatttgtc 205
>RF01058;MIR806;AP008218.1/4987696-4987454 39947:Oryza sativa
Japonica Group
Length = 243
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtc 50
||||||||||||| |||||||||||||
Sbjct: 2 tactccctccgtttctaaatatttgtc 28
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgtc 50
||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgttcctaaatacttgtc 31
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatatttgtc 50
||||||||||||||||||||| |||||
Sbjct: 90 tactccctccgttcctaaatacttgtc 64
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatat 45
|||||||||||||||||||||||
Sbjct: 4 ctactccctccgttcctaaatat 26
>RF01058;MIR806;AAAA02001528.1/33342-33103 39946:Oryza sativa
Indica Group
Length = 240
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtttctaaatatttg 26
>RF01058;MIR806;AL606460.3/33605-33845 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 164 caaatatttaggaacggaggtagtag 189
||||||||||| ||||||||||||||
Sbjct: 26 caaatatttagaaacggaggtagtag 1
>RF01058;MIR806;AP008210.1/13174748-13174507 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 242 ctactccctccgtttctaaatatttg 217
>RF01058;MIR806;AP006856.2/2894-3132 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 239 ctactccctccgtttctaaatatttg 214
>RF01058;MIR806;AAAA02029671.1/2843-3067 39946:Oryza sativa Indica
Group
Length = 225
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtccctaaatatttg 26
>RF01058;MIR806;BX255875.3/110133-110364 4530:Oryza sativa (rice)
Length = 232
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtttctaaatatttg 26
>RF01058;MIR806;AP004691.2/82989-82746 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||| |||||||||||||||
Sbjct: 244 ctactccctcagttcctaaatatttg 219
>RF01058;MIR806;AACV01025401.1/24499-24738 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 240 ctactccctccgtttctaaatatttg 215
>RF01058;MIR806;AC136218.2/6294-6056 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
||||||||||| ||||||||||||||
Sbjct: 239 ctactccctcctttcctaaatatttg 214
>RF01058;MIR806;AAAA02022467.1/24859-24623 39946:Oryza sativa Indica
Group
Length = 237
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 164 caaatatttaggaacggaggtagtag 189
|||||||| |||||||||||||||||
Sbjct: 26 caaatattcaggaacggaggtagtag 1
>RF01058;MIR806;AP008215.1/21100314-21100058 39947:Oryza sativa
Japonica Group
Length = 257
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtttctaaatatttg 26
>RF01058;MIR806;AP008214.1/20372442-20372205 39947:Oryza sativa
Japonica Group
Length = 238
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
||||||||||| ||||||||||||||
Sbjct: 238 ctactccctcctttcctaaatatttg 213
>RF01058;MIR806;AACV01003462.1/3109-2870 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtttctaaatatttg 26
>RF01058;MIR806;CR855115.1/69132-69372 4530:Oryza sativa (rice)
Length = 241
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtttctaaatatttg 26
>RF01058;MIR806;AAAA02015256.1/6210-6451 39946:Oryza sativa Indica
Group
Length = 242
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
||||||||||||||||||||| ||||
Sbjct: 242 ctactccctccgttcctaaatgtttg 217
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 242 ctactccctccgtttctaaatatttg 217
>RF01058;MIR806;AACV01003404.1/46592-46354 39947:Oryza sativa
Japonica Group
Length = 239
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 ctactccctccgttcctaaatatttg 48
||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtccctaaatatttg 26
>RF01058;MIR806;AAAA02030120.1/47083-46895 39946:Oryza sativa Indica
Group
Length = 189
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 189 ctactccctccgtttctaaatatttg 164
>RF01058;MIR806;AP008211.1/4711397-4711161 39947:Oryza sativa
Japonica Group
Length = 237
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 ctactccctccgttcctaaatatttg 48
|||||||||||||| |||||||||||
Sbjct: 237 ctactccctccgtttctaaatatttg 212
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatat 68
>RF00906;MIR1122;AK248235.1/1048-956 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatatttgt 49
||||||||| ||||||||||||||||
Sbjct: 5 tactccctctgttcctaaatatttgt 30
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatat 26
>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatat 94
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatat 55
>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 tactccctccgttcctaaatat 45
||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatat 26
