miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 186 bits (94), Expect = 6e-47
Identities = 120/129 (93%)
Strand = Plus / Plus
Query: 20 agtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctaga 79
|||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 3 agtactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttaga 62
Query: 80 actaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacg 139
|||||||||||||||||||||||| ||||||| | |||||||||||||||||||| |||
Sbjct: 63 actaaaatacatctagatacatccccttttattcattttgatgacaagtatttccggacg 122
Query: 140 gagggagta 148
|||||||||
Sbjct: 123 gagggagta 131
Score = 97.6 bits (49), Expect = 4e-20
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 132 gtactccctccgtccggaaatacttgtcatcaaaatgaataaaaggggatgtatctagat 73
Query: 81 ctaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgg 140
|| || |||| |||||||| |||| || | ||||||||||||||||| || ||||
Sbjct: 72 gtattttagttctaaatacatccctttttgtccattttgatgacaagtattttcggacgg 13
Query: 141 agggagta 148
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 176 bits (89), Expect = 6e-44
Identities = 118/128 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
||||||| ||||||||||||| |||||||| | |||||||||||||||||||| |||||
Sbjct: 71 taaaatatgtctagatacatccccttttatccattttgatgacaagtatttccggacgga 12
Query: 142 gggagtat 149
||||||||
Sbjct: 11 gggagtat 4
Score = 97.6 bits (49), Expect = 4e-20
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatctagaca 64
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|| || |||||||||||| ||||| | ||||||||||||||||| || |||||
Sbjct: 65 tattttagttctagatacatctctttttagtcactttgatgacaagtattttcggacgga 124
Query: 142 gggagtat 149
||||||||
Sbjct: 125 gggagtat 132
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 170 bits (86), Expect = 4e-42
Identities = 119/129 (92%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
||||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 4 gtactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatgtatctagaa 63
Query: 81 ctaaaatacatctagatacat-ccncttttatctagtttgatgacaagtatttccgaacg 139
||||||||||||||||||||| || |||||||| | |||| ||||||||||||||| |||
Sbjct: 64 ctaaaatacatctagatacatcccccttttatccattttggtgacaagtatttccggacg 123
Query: 140 gagggagta 148
|||||||||
Sbjct: 124 gagggagta 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 107/128 (83%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaa-agagatgtatctagaa 80
|||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 132 tactccctccgtccggaaatacttgtcaccaaaatggataaaagggggatgtatctagat 73
Query: 81 ctaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgg 140
|| || ||||||||||| | ||||| | ||||||||||||||||| |||||||
Sbjct: 72 gtattttagttctagatacatttcttattatccattttgatgacaagtattttcgaacgg 13
Query: 141 agggagta 148
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 167 bits (84), Expect = 6e-41
Identities = 113/123 (91%)
Strand = Plus / Minus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||||
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaa 72
Query: 81 ctaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgg 140
|||||||||||||| |||||||| |||||| || |||||||||||||||||||| ||||
Sbjct: 71 ctaaaatacatctaaatacatcccgttttatttattttgatgacaagtatttccggacgg 12
Query: 141 agg 143
|||
Sbjct: 11 agg 9
Score = 54.0 bits (27), Expect = 6e-07
Identities = 98/122 (80%)
Strand = Plus / Plus
Query: 27 cctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaaaa 86
||||||||| ||||||||||||||||||| |||||| | ||||||| |||| ||
Sbjct: 9 cctccgtccggaaatacttgtcatcaaaataaataaaacgggatgtatttagatgtattt 68
Query: 87 tacatctagatacatccncttttatctagtttgatgacaagtatttccgaacggagggag 146
|| |||||||| ||| |||| | | ||||||||||||||||| || ||||||||||
Sbjct: 69 tagttctagatatatctctttttgttcattttgatgacaagtattttcggacggagggag 128
Query: 147 ta 148
||
Sbjct: 129 ta 130
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 165 bits (83), Expect = 2e-40
Identities = 112/122 (91%)
Strand = Plus / Plus
Query: 31 cgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaaaataca 90
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaagagatgtacctagaactaaaatata 73
Query: 91 tctagatacatccncttttatctagtttgatgacaagtatttccgaacggagggagtata 150
||||||||||| | |||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 74 tctagatacattcttttttatttactttgatgacaagtattttcggacggagggagtata 133
Query: 151 ta 152
||
Sbjct: 134 ta 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| |||||||||||||||||| | ||||||| |||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtaaataaaaaagaatgtatctagata 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtattt 132
|| || ||||| |||||| ||||||| | |||||||||||||||||
Sbjct: 71 tattttagttctaggtacatctctttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 163 bits (82), Expect = 9e-40
Identities = 117/129 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||| ||||||||| ||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtgtatctagaac 64
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|||||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||
Sbjct: 65 taaaatacatctagatacatccccttttattcatcttgatgacaagtatttccggacgga 124
Query: 142 gggagtata 150
|||||||||
Sbjct: 125 gggagtata 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 106/128 (82%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| |||||||||||||||| ||| |||||| | ||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaagatgaataaaaggggatgtatctagatg 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|| || |||||||||| | ||||||| | | ||||||||| |||||||| |||||
Sbjct: 71 tattttagttctagatacaccactttttatccattctgatgacaaatatttccggacgga 12
Query: 142 gggagtat 149
||||||||
Sbjct: 11 gggagtat 4
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 159 bits (80), Expect = 1e-38
Identities = 115/127 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
||| ||||||||||||||||| ||||||| || |||||||||||||||||||| |||||
Sbjct: 71 taatatacatctagatacatctccttttatttattttgatgacaagtatttccggacgga 12
Query: 142 gggagta 148
|| ||||
Sbjct: 11 ggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 106/128 (82%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 5 tacttcctccgtccggaaatacttgtcatcaaaataaataaaaggagatgtatctagatg 64
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|| | || | |||||| |||| ||||||| | ||||||||||| ||||| | |||||
Sbjct: 65 tatattagttttagatatatccttttttatccattttgatgacaattatttttggacgga 124
Query: 142 gggagtat 149
||||||||
Sbjct: 125 gggagtat 132
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 145 bits (73), Expect = 2e-34
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
|||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaagaatgtatctagaa 63
Query: 81 ctaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgg 140
||||||||||||||||||||| |||||||| | |||||||||||||||||| | ||||
Sbjct: 64 ttaaaatacatctagatacatcttcttttatccattttgatgacaagtatttctggacgg 123
Query: 141 agggagta 148
|| |||||
Sbjct: 124 agagagta 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 131 tactctctccgtccagaaatacttgtcatcaaaatggataaaagaagatgtatctagatg 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtattt 132
|| || ||||||||||| | ||||||| | |||||||||||||||||
Sbjct: 71 tattttaattctagatacattcttttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 137 bits (69), Expect = 5e-32
Identities = 113/128 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
||||||| | || |||||||| ||| ||| || ||||||||||||||||| || ||| |
Sbjct: 71 taaaatatgtttaaatacatcctcttatatttattttgatgacaagtattttcggacgaa 12
Query: 142 gggagtat 149
||||||||
Sbjct: 11 gggagtat 4
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 106 ttttatctagtttgatgacaagtatttccgaacggagggagtatat 151
||||||| | ||||||||||||||||| || |||||||||||||||
Sbjct: 89 ttttatccattttgatgacaagtattttcggacggagggagtatat 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaat 56
|||||||| ||||| ||||||||||||||||||||
Sbjct: 5 tactcccttcgtccgaaaatacttgtcatcaaaat 39
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 131 bits (66), Expect = 3e-30
Identities = 95/105 (90%)
Strand = Plus / Plus
Query: 31 cgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaaaataca 90
||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatgatgtacctagaactaaaataca 73
Query: 91 tctagatacatccncttttatctagtttgatgacaagtatttccg 135
|||| |||||| | ||||||| | ||||||||||||||||||||
Sbjct: 74 tctatatacattcccttttattcattttgatgacaagtatttccg 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 38 aaatacttgtcatcaaaatggataaaaagagatgtatctagaactaaaatacatctagat 97
|||||||||||||||||||| |||||| | |||||| |||| || || ||||| |
Sbjct: 115 aaatacttgtcatcaaaatgaataaaagggaatgtatatagatgtattttagttctaggt 56
Query: 98 acatccncttttatctagtttgatgacaagtattt 132
||||| ||||||| | |||||||||||||||||
Sbjct: 55 acatcattttttatccattttgatgacaagtattt 21
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 125 bits (63), Expect = 2e-28
Identities = 83/90 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||||||||| ||| | |||||||||||||| ||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 82 taaaatacatctagatacatccncttttat 111
|||||||||||||||||||||| ||||||
Sbjct: 82 taaaatacatctagatacatccttttttat 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 117 ttgatgacaagtatttccgaacggagggagtat 149
|||||||||||||||| || |||||||||||||
Sbjct: 111 ttgatgacaagtattttcggacggagggagtat 143
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 121 bits (61), Expect = 3e-27
Identities = 76/81 (93%)
Strand = Plus / Minus
Query: 20 agtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctaga 79
||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 agtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctaga 64
Query: 80 actaaaatacatctagataca 100
|||||||||||||||||||||
Sbjct: 63 actaaaatacatctagataca 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 91 tctagatacatccncttttatctagtttgatgacaagtatttccgaacggagggagta 148
||||||||||| | ||||||| | ||||||||||||||||| || || |||||||||
Sbjct: 64 tctagatacattcatttttatccattttgatgacaagtattttcggacagagggagta 121
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| |||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 82 taaaatacatctagatacatcc 103
||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 107 bits (54), Expect = 4e-23
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| |||||||||||| | ||||| ||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 82 taaaatacatctagatacatcc 103
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| || ||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 82 taaaatacatctagatacatcc 103
||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatcc 40
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| || |||||||| |||||||||| | ||| ||||||||||||||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 82 taaaatacatctagatacatcc 103
|||||||| |||||||||||||
Sbjct: 65 taaaatacgtctagatacatcc 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 91 tctagatacatccncttttatctagtttgatgacaagtatttccgaacggagggagtat 149
||||||||||||| || | || | ||||| |||||||| ||||| |||||||||||||
Sbjct: 62 tctagatacatccatttctttccattttgacgacaagtacttccggacggagggagtat 4
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtccaaaaatacttgtcatcaaaatggataaaa 64
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2 aagtactccctccgtccgaaaatacttgtcatcaaaatggataaaa 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaa 64
|||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 96 tacttcctccgtccgaaaatacttgtcatcaaaatggataaaa 54
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 105 cttttatctagtttgatgacaagtatttccgaacggagggagta 148
|||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 48 cttttatccattttgatgacaagtattttcggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 105 cttttatctagtttgatgacaagtatttccgaacggagggagta 148
|||||||| | ||||||||||||||||| || ||||||| ||||
Sbjct: 53 cttttatccattttgatgacaagtattttcggacggaggaagta 96
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 83.8 bits (42), Expect = 6e-16
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||| ||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 120 tactccctccatccaaaaatacttgttgg-aaaatggataaaaatggatgtatctagaag 62
Query: 82 taaaatacatctagatacatcc 103
|||||||| |||||||||||||
Sbjct: 61 taaaatacgtctagatacatcc 40
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 110/132 (83%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 18 taagtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatcta 77
||||||||| |||||||| |||||||||||||| |||||| | ||||| | || ||| ||
Sbjct: 1 taagtactctctccgtccgaaaatacttgtcattaaaatgaacaaaaa-aaatatattta 59
Query: 78 gaactaaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaa 137
||||||||||||| ||||||||| ||||| || ||||||||||||||||| || |
Sbjct: 60 aaactaaaatacatttagatacatttttatttatttattttgatgacaagtattttcgga 119
Query: 138 cggagggagtat 149
||||||||||
Sbjct: 120 tagagggagtat 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatcta 77
||||||||| ||| |||||||||||||||||||| ||||| | | |||||||||
Sbjct: 130 tactccctctatccgaaaatacttgtcatcaaaataaataaataaaaatgtatcta 75
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 23 actccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaact 82
|||||||| ||||| || |||||||| |||| |||||||| |||||||||||||||
Sbjct: 120 actccctctgtccagaattacttgtcgcataaattgataaaaatggatgtatctagaact 61
Query: 83 aaaatacatctagatacatcc 103
|||||||||||||||||||||
Sbjct: 60 aaaatacatctagatacatcc 40
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 20 agtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctaga 79
|||||||||||||||| ||||||||||||| |||||| |||||| | |||||||||| |
Sbjct: 122 agtactccctccgtccggaaatacttgtcataaaaatgtataaaatg-gatgtatctata 64
Query: 80 actaaaatacatctagatacatccnctttta 110
| ||||||| |||||||||||| ||||||
Sbjct: 63 agtaaaataagtctagatacatctactttta 33
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 120 atgacaagtatttccgaacggagggagta 148
|||||||||||||||| ||||||||||||
Sbjct: 92 atgacaagtatttccggacggagggagta 120
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 53 aaatggataaaaagagatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 90 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatcc 40
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 20 agtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctaga 79
|||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 3 agtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctaga 62
Query: 80 actaaaatacatct 93
||||||||||||||
Sbjct: 63 actaaaatacatct 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 20 agtactccctccgtccaaaaatacttgtc 48
|||||||||||||||| ||||||||||||
Sbjct: 124 agtactccctccgtccgaaaatacttgtc 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||||||||| ||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 82 taaaatacatctagatacatcc 103
|||||||| ||||| |||||||
Sbjct: 65 taaaatacgtctaggtacatcc 86
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 25 tccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaactaa 84
||||||||| | ||| |||| |||| |||||||||||||| |||||||||| || |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 85 aatacatctagatacat 101
|||||||||||||||||
Sbjct: 68 aatacatctagatacat 84
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||||||||||||||||||||||||||
Sbjct: 74 gatgtatctagaactaaaatacatctagatacatcc 39
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| || ||||||||| ||||| ||||||| |||||||||||||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 82 taaaatacatctagatacat 101
|| |||||||||||||||||
Sbjct: 65 tataatacatctagatacat 84
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||||||||||||||||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacatctagatacatcc 76
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 23 actccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaact 82
||||||||||| | ||||||||||| ||||| |||||| | ||||||||||||||
Sbjct: 1 actccctccgttcggaaatacttgtcggagaaatgcctaaaaataaatgtatctagaact 60
Query: 83 aaaatacatctagatacat 101
|||||||||||||||||||
Sbjct: 61 aaaatacatctagatacat 79
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagt 147
||||||||||||||||||||||||||
Sbjct: 26 gacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacat 101
||||||||||||||||||||||||||||||||||
Sbjct: 41 gatgtatctagaactaaaatacatctagatacat 74
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 53 aaatggataaaaagagatgtatctagaactaaaatacatctagata 98
||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 36 aaatggataaaaatggatgtatctagaattaaaatacatctagata 81
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagtatat 151
|||||||||||||| |||||||||||||||
Sbjct: 95 gacaagtatttccggacggagggagtatat 124
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 62 aaaagagatgtatctagaactaaaatacatctagatacatcc 103
|||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtctagatacatcc 76
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
|||||||||||||||||||||||||| |||||||||
Sbjct: 41 gatgtatctagaactaaaatacatcttgatacatcc 76
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
|||||||||| |||||||||||||||||||||||||
Sbjct: 75 gatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||| | |||||||||| | | |||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggatatattg-gatgtatctataac 63
Query: 82 taaaatacatctagatacat 101
||||||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagtat 149
|||||||||||||| |||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagtat 4
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
|||||||||| |||||||||||||||||||||||||
Sbjct: 75 gatgtatctataactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||||| ||||||||||||||||||||
Sbjct: 75 gatgtatctagaactgaaatacatctagatacatcc 40
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
||||||||||||||| ||||||||||| | ||||| || | || ||||||||||| |||
Sbjct: 5 tactccctccgtccagaaatacttgtcctagaaatgaat-ataatagatgtatctataac 63
Query: 82 taaaatacatctagatacat 101
||||||| |||||||||||
Sbjct: 64 taaaataagtctagatacat 83
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggat 60
||||||||||||||| || ||||||||||||||||||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggat 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggata 61
|||||||||||||| |||||||||||||| |||||||||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggata 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 116 tttgatgacaagtatttccgaacggagggagtat 149
|||||||||||||| ||| | |||||||||||||
Sbjct: 37 tttgatgacaagtaattctggacggagggagtat 4
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 59 ataaaaagagatgtatctagaactaaaatacatctagatacat 101
||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 32 ataaaaatggatgtatctataactaaaatacatctagatacat 74
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 120 atgacaagtatttccgaacggagggagta 148
|||||||||| ||||||||||||||||||
Sbjct: 33 atgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 69 atgtatctagaactaaaatacatctagatacatc 102
|||||||||||||||||||||| |||||||||||
Sbjct: 74 atgtatctagaactaaaatacaactagatacatc 41
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 69 atgtatctagaactaaaatacatctagatacat 101
|||||||||||||||||||| ||||||||||||
Sbjct: 52 atgtatctagaactaaaatatatctagatacat 84
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||||||||||| |||||||||||||
Sbjct: 41 gatgtatctagaactaaaatatgtctagatacatcc 76
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 72 tatctagaactaaaatacatctagatacatcc 103
|||||| |||||||||||||||||||||||||
Sbjct: 71 tatctaaaactaaaatacatctagatacatcc 40
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 72 tatctagaactaaaatacatctagatacatcc 103
|||||||||||||||||| |||||||||||||
Sbjct: 45 tatctagaactaaaatacgtctagatacatcc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtaattccgaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||| ||||||||||||||||||
Sbjct: 85 gacaagtaattccgaacggagggagta 111
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 52 aaaatggataaaaagagatgtatctagaactaaaatacatctagatacatcc 103
|||||||||| ||| |||||| |||||||||||| |||||||||||||||
Sbjct: 35 aaaatggatagaaatgaatgtatttagaactaaaatgcatctagatacatcc 86
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggat 60
||||||||||||| ||||||||||||| | |||||||||
Sbjct: 5 tactccctccgtctaaaaatacttgtcctaaaaatggat 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
||||||||||||||| ||||||||| | | ||||| ||| || | |||||||||| ||
Sbjct: 121 gtactccctccgtccggaaatacttgacctaaaaataaatataatg-gatgtatctataa 63
Query: 81 ctaaaatacatctagatacatcc 103
|||||||| ||||||| |||||
Sbjct: 62 ctaaaataagtctagattcatcc 40
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| || ||||||||| ||||||||| | ||| |||||| ||||||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 82 taaaata 88
|||||||
Sbjct: 61 taaaata 55
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 69 atgtatctagaactaaaatacatctagatacatc 102
|||||| |||||||||||||| ||||||||||||
Sbjct: 74 atgtatttagaactaaaatacgtctagatacatc 41
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 21 gtactccctccgtccaaaaatacttgtc 48
||||||||||||||| ||||||||||||
Sbjct: 4 gtactccctccgtccgaaaatacttgtc 31
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||| || ||||||||||| |||||| ||| ||| |||| ||||| |||
Sbjct: 121 tactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaaaac 62
Query: 82 taaaatacatctagatacatcc 103
||||||| |||| ||||||||
Sbjct: 61 taaaatatgtctaaatacatcc 40
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||||||| ||||||||||||||
Sbjct: 95 gacaagtatttctgaacggagggagta 121
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 69 atgtatctagaactaaaatacatctagatacat 101
|||||||||||| ||||||| ||||||||||||
Sbjct: 42 atgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 57 ggataaaaagagatgtatctagaactaaaatacatctagatacat 101
||||||||| ||||||| |||||||||||||| |||| ||||||
Sbjct: 40 ggataaaaatggatgtatgtagaactaaaatacgtctaaatacat 84
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 gtatctagaactaaaatacatctagata 98
|||| |||||||||||||||||||||||
Sbjct: 44 gtatttagaactaaaatacatctagata 71
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 21 gtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaa 80
||||||||||||||| ||||||||||| | ||||| || |||| |||||||||| ||
Sbjct: 4 gtactccctccgtccgcaaatacttgtcctagaaatgaat-aaaattgatgtatctataa 62
Query: 81 ctaaaata 88
||||||||
Sbjct: 63 ctaaaata 70
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 67/80 (83%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 19 aagtactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctag 78
||||||||||||||||| ||||||||||| ||||| ||| || | ||||||||||
Sbjct: 2 aagtactccctccgtccggaaatacttgtcccagaaatgaatataatg-gatgtatctat 60
Query: 79 aactaaaatacatctagata 98
|||||||||| ||||||||
Sbjct: 61 aactaaaataagtctagata 80
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||||||||| ||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 123 acaagtatttccgaacggagggagta 148
||||||||||||| ||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 atgtatctagaactaaaatacatctagatacatcc 103
|||||||||||||||||| | |||||||||||||
Sbjct: 82 atgtatctagaactaaaactcgtctagatacatcc 48
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 122 gacaagtatttccgaacggagggagtatata 152
|||||||||||||| | ||||||||||||||
Sbjct: 31 gacaagtatttccggatggagggagtatata 1
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagtatata 152
|||||||||||||| |||| |||||||||||
Sbjct: 94 gacaagtatttccggacggggggagtatata 124
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 123 acaagtatttccgaacggagggagtat 149
||||||||||||||||||||| |||||
Sbjct: 30 acaagtatttccgaacggaggtagtat 4
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagtatata 152
||||||||||| ||||||||||||||||||
Sbjct: 64 gacaagtatttaggaacggagggagtatata 94
>RF00906;MIR1122;AL732333.2/10670-10758 4530:Oryza sativa (rice)
Length = 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 agtactccctccgtccaaaaata 42
|||||||||||||||||||||||
Sbjct: 87 agtactccctccgtccaaaaata 65
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 123 acaagtatttccgaacggagggagta 148
||||||||||||| ||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacat 101
||||||||||| ||| |||||| |||||||||||
Sbjct: 41 gatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 123 acaagtatttccgaacggagggagta 148
||||||||||||| ||||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
>RF00906;MIR1122;AP008213.1/24848104-24848218 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 gtactccctccgtccaaaaata 42
||||||||||||||||||||||
Sbjct: 112 gtactccctccgtccaaaaata 91
