miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 143 bits (72), Expect = 7e-34
Identities = 100/108 (92%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggatgtatctagaactaaaatacat 76
|||| |||||||||| || |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtccagaattacttgtcatcaaaatggatgtgtctagaactaaaatacat 64
Query: 77 ctatgatacatctatttcaatgacaagtatttccggacggagggagta 124
||| |||| ||| ||||||||||||||||||| |||||||||||||||
Sbjct: 65 cta-gatatatccatttcaatgacaagtattttcggacggagggagta 111
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggatgtatctaga 64
|||| ||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 111 tactccctccgtccgaaaatacttgtcattgaaatggatatatctaga 64
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 107 bits (54), Expect = 4e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 81 aaaatggatgtatctagaactaaaatacatcta-gatacatccattcctatgacaagtat 23
Query: 107 ttccggacggagggagta 124
|||||||||| |||||||
Sbjct: 22 ttccggacggcgggagta 5
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 81 aaaatggatgtatctagaactaaaatacatcta-gatacatccattcccccgacaagtat 23
Query: 107 ttccggacggagggagta 124
||||||||||||||||||
Sbjct: 22 ttccggacggagggagta 5
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 45 aaaatggatgtatctagaactaaaatacatcta-gatacatccattcccccgacaagtat 103
Query: 107 ttccggacggagggagta 124
||||||||||||||||||
Sbjct: 104 ttccggacggagggagta 121
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||
Sbjct: 46 aaatggatgtatctagaactaaaatacatctttgatacatccattcctcggacaagtatt 105
Query: 108 tccggacggagggagta 124
| |||||||||||||||
Sbjct: 106 ttcggacggagggagta 122
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||| || |
Sbjct: 46 aaatggatgtatctagaactaaaatacgtcta-gatacatccatttctatgacaaataat 104
Query: 108 tccggacggagggagta 124
|||||||||||||||||
Sbjct: 105 tccggacggagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||| ||||||||||||||||||
Sbjct: 31 gacaagtacttccggacggagggagta 5
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||| |||||||||||||||||||||||||| |||||| | || ||||||||||||||
Sbjct: 81 aaaatgaatgtatctagaactaaaatacatcta-gatacacccatctcaatgacaagtat 23
Query: 107 ttccggacggagggagta 124
|| ||||| |||||||||
Sbjct: 22 tttcggacagagggagta 5
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 91.7 bits (46), Expect = 2e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||| ||||||||||||||||||||||| |||||||| ||| | ||||||| |||
Sbjct: 81 aaaatggatatatctagaactaaaatacatcta-gatacatccattcctatgacaaatat 23
Query: 107 ttccggacggagggagta 124
|||||||| |||||||||
Sbjct: 22 ttccggacagagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 tgacaagtatttccggacggagggagta 124
||||||||| ||||||||||||||||||
Sbjct: 94 tgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 83.8 bits (42), Expect = 6e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||||||||||||||| |||| | |||||| ||| | ||||||||||
Sbjct: 45 aaaatggatgtatctagaactaaaatacgtcta-ggtacatccattcctctgacaagtat 103
Query: 107 ttccggacggagggagta 124
|||||||| |||||||||
Sbjct: 104 ttccggacagagggagta 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtatttcaggacggagggagta 5
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 83.8 bits (42), Expect = 6e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||| ||||||||||||| |||| || ||||| |||||||||
Sbjct: 45 aaaatggatgtatctagaattaaaatacatcta-gatagattcatttctccgacaagtat 103
Query: 107 ttccggacggagggagta 124
||||||||||||||||||
Sbjct: 104 ttccggacggagggagta 121
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 81.8 bits (41), Expect = 2e-15
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
|||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||
Sbjct: 80 aaatggatgtatctagaactgaaatacatcta-gatacatccatttccgcgacaagtatt 22
Query: 108 tccggacggagggagta 124
|| |||| |||||||||
Sbjct: 21 tcgggacagagggagta 5
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||| |||||| |||||||||||||| |||| |||||||| ||||| |||||||||
Sbjct: 81 aaaatgaatgtatttagaactaaaatacgtcta-gatacatcaatttctcagacaagtat 23
Query: 107 ttccggacggagggagta 124
|| |||||||||||||||
Sbjct: 22 tttcggacggagggagta 5
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||| |||||||||||||||||| |||| |||||||| ||||| ||||||||
Sbjct: 35 aaaatggatctatctagaactaaaatacgtcta-gatacatccatttctgagacaagtaa 93
Query: 107 ttccggacggagggagta 124
||||| ||||||||||||
Sbjct: 94 ttccgaacggagggagta 111
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 75.8 bits (38), Expect = 1e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||||||||||||||| |||| |||||||| ||||| ||||| ||
Sbjct: 81 aaaatggatgtatctagaactaaaatacgtcta-gatacatccatttctccgacaaataa 23
Query: 107 ttccggacggagggagta 124
|| |||||||||||||||
Sbjct: 22 tttcggacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 acaagtatttccggacggagggagta 124
||||||| ||||||||||||||||||
Sbjct: 96 acaagtagttccggacggagggagta 121
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 73.8 bits (37), Expect = 5e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 80 aaatggatgtatctataactaaaatacatcta-gatacatccattctttggacaagtatt 22
Query: 108 tccggacggagggagta 124
|||||||| ||||||||
Sbjct: 21 tccggacgaagggagta 5
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 36 tacttgtcatcaaaatggatgtatctagaactaaaatacatcta 79
|||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 24 tacttgtcataaaaatggatgtatctataactaaaatacatcta 67
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 81 gatacatctatttcaatgacaagtatttccggacggagggagta 124
|||||||| |||| |||||||||| ||||| ||||||||||||
Sbjct: 48 gatacatccatttttatgacaagtaattccgaacggagggagta 5
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 96 tacttcctccgtccgaaaatacttgtcatcaaaatggat 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggat 43
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 33 atgacaagtattttcggacggagggagta 5
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatc 88
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 35 aaaatggatgtatctagaactaaaatacatct-tgatacatc 75
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 67.9 bits (34), Expect = 3e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||| |||||||||||||||||||||| |||| |||||||| |||| ||||||||
Sbjct: 35 aaaatagatgtatctagaactaaaatacgtcta-gatacatccattttcgcgacaagtaa 93
Query: 107 ttccggacggagggagta 124
||||| ||||||||||||
Sbjct: 94 ttccgaacggagggagta 111
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 67.9 bits (34), Expect = 3e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 51 tggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatttcc 110
|||||||||||| |||||||||| |||| ||||||| || || | |||||||||||||
Sbjct: 48 tggatgtatctataactaaaataagtcta-gatacattcatctctaggacaagtatttcc 106
Query: 111 ggacggagggagta 124
||||||||||||||
Sbjct: 107 ggacggagggagta 120
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 67.9 bits (34), Expect = 3e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||| |||||||||||||||||||| ||||| ||||||| ||| | ||| |||||||
Sbjct: 45 aaaatgaatgtatctagaactaaaatatatcta-gatacatacattcctatgccaagtat 103
Query: 107 ttccggacggagggagta 124
|| |||| ||||||||||
Sbjct: 104 tttcggatggagggagta 121
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 67.9 bits (34), Expect = 3e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||| |||||||| |||| |||||||| ||||| ||||||||||
Sbjct: 81 aaaatggatgtatctagaagtaaaatacgtcta-gatacatccatttctctgacaagtat 23
Query: 107 ttccggacggagggagta 124
|||| ||| ||| ||||
Sbjct: 22 atccgaacgtaggcagta 5
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 65.9 bits (33), Expect = 1e-10
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatc 88
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 79 aaatggatgtatctagaactaaaatacatcta-gatacatc 40
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatc 88
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 36 aaatggatgtatctagaactaaaatacatcta-gatacatc 75
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttc 94
||||| |||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 80 aaatgaatgtatctagaactaaaatacaacta-gatacatctatttc 35
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaa-tacatctatgatacatctatttcaatgacaagta 105
|||||| |||||||||||||||||| ||| | || |||||||||||||| |||| |||
Sbjct: 44 aaaatgaatgtatctagaactaaaaatacgttta-gatacatctatttctccgacaggta 102
Query: 106 tttccggacggagggagta 124
|||||||| ||||||||||
Sbjct: 103 tttccggatggagggagta 121
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||
Sbjct: 35 aaaatggatgtatctagaactaaaatatgtcta-gatacatccattttttcgacaagtaa 93
Query: 107 ttccggacggagggagtaa 125
||| | |||||||||||||
Sbjct: 94 ttcagaacggagggagtaa 112
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 50 atggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatttc 109
|||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |||
Sbjct: 38 atggatgtatctagaactaaaatacatcta-gatacattcatttctgcgacaagtaattc 96
Query: 110 cggacggagggagta 124
| ||||| ||||||
Sbjct: 97 caaacggatggagta 111
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||| |||||||||||||||| |||||||||||||||||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggat 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 16 ttacttcctccgtccaaaaatacttgtcatcaaaat 51
||||||||||||||| |||||||||||||||||||
Sbjct: 4 ttacttcctccgtccggaaatacttgtcatcaaaat 39
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagtaa 125
|||||||||||||||||||||||| |||||
Sbjct: 33 atgacaagtatttccggacggaggaagtaa 4
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggat 93
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 103 atgacaagtattttcggacggagggagta 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaat 51
|||| ||| ||||| ||||||||||||||||||||
Sbjct: 5 tactcccttcgtccgaaaatacttgtcatcaaaat 39
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
|||||||||||||||||||| ||| | |||| |||||||| ||||| | |||||||| |
Sbjct: 80 aaatggatgtatctagaactgaaaaatgtcta-gatacatccatttctacgacaagtaat 22
Query: 108 tccggacggaggga 121
|||| |||||||||
Sbjct: 21 tccgaacggaggga 8
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 60.0 bits (30), Expect = 8e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctattt 93
||||||||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 80 aaatggatgtatctataactaaaatacatcta-gatacatccattt 36
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatgga 54
|||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatgga 42
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||||
Sbjct: 103 atgacaagtatttccggacggagggagta 131
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 33 atgacaagtattttcggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatg 52
|||| ||||||||| ||||||||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaaaatg 96
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 60.0 bits (30), Expect = 8e-09
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||| ||||| || |||||||||| |||| |||||||||||| | |||||||||
Sbjct: 81 aaaatgggtgtatttataactaaaataattctac-atacatctatttttaagacaagtat 23
Query: 107 ttccggacggagggagta 124
||||||| ||||||||||
Sbjct: 22 ttccggatggagggagta 5
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 60.0 bits (30), Expect = 8e-09
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||||||||||||||||| || |||||||||| ||||||| ||| | |||||||||||
Sbjct: 45 aaaatggatgtatctagaattataatacatcta-gatacatacattcctatgacaagtat 103
Query: 107 tt 108
||
Sbjct: 104 tt 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 97 tgacaagtatttccggacggagggagta 124
||||||||| ||||||||||||||||||
Sbjct: 32 tgacaagtaattccggacggagggagta 5
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||||
Sbjct: 103 atgacaagtatttccggacggagggagta 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 55 tgtatctagaactaaaatacatctatgatacatc 88
||||||||||||||||||||||||| ||||||||
Sbjct: 53 tgtatctagaactaaaatacatcta-gatacatc 85
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||| |||||||||||||||||||||
Sbjct: 33 atgacaaatatttccggacggagggagta 5
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 58.0 bits (29), Expect = 3e-08
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
|||||||| |||||| |||||||||||||||| |||||||| ||||| ||| |||| |
Sbjct: 80 aaatggatatatctaaaactaaaatacatcta-gatacatccatttctgcgacgagtaat 22
Query: 108 tccggacggagggagta 124
|| | ||||||||||||
Sbjct: 21 tcagaacggagggagta 5
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||||
Sbjct: 33 atgacaagtatttccggacggagggagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||| ||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggat 43
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaa 49
|||| ||||||||| ||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaa 99
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 103 atgacaagtattttcggacggagggagta 131
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||||
Sbjct: 92 atgacaagtatttccggacggagggagta 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||| || ||||||| |||| |||||||||| || | |||||||||
Sbjct: 81 aaaatggatgtatctataagtaaaataagtcta-gatacatctacttttaggacaagtat 23
Query: 107 ttccggacggagggagta 124
|| || ||| ||||||||
Sbjct: 22 tttcgaacgaagggagta 5
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 23 ctccgtccaaaaatacttgtcatcaaaatggat 55
||||||||| |||||||||||||||||||||||
Sbjct: 125 ctccgtccagaaatacttgtcatcaaaatggat 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 26 cgtccaaaaatacttgtcatcaaaatggat 55
||||| ||||||||||||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggat 43
Score = 48.1 bits (24), Expect = 3e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 54 atgtatctagaactaaaatacatctatgatacatct 89
|||||||||||| ||||||||||||| |||||||||
Sbjct: 52 atgtatctagaattaaaatacatcta-gatacatct 86
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 97 tgacaagtatttccggacggagggagtaa 125
|||||||||||||||||||||||||||||
Sbjct: 105 tgacaagtatttccggacggagggagtaa 133
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
|||| ||||||| | ||||||||||||||||||||||||
Sbjct: 5 tactccctccgttcgaaaatacttgtcatcaaaatggat 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 54 atgtatctagaactaaaatacatctatgatacatc 88
|||||||||||||||||||||||||| ||||||||
Sbjct: 52 atgtatctagaactaaaatacatcta-gatacatc 85
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 16 ttacttcctccgtccaaaaatacttgtcatcaaaatggat 55
||||| ||||||||| |||||||||||| ||||||||||
Sbjct: 133 ttactccctccgtccggaaatacttgtcaccaaaatggat 94
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatg 52
|||| ||||||||| |||||||||||||||||||||
Sbjct: 130 tactccctccgtccgaaaatacttgtcatcaaaatg 95
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 102 atgacaagtattttcggacggagggagta 130
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagg 119
||||||||||||||||||||||||
Sbjct: 32 atgacaagtatttccggacggagg 9
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 tcctccgtccaaaaatacttgtcatcaaaat 51
|||||||||| |||||||||||||||||||
Sbjct: 8 tcctccgtccggaaatacttgtcatcaaaat 38
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggatgtatctaga 64
|||| |||||||| ||||||||||||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtctaaaaatacttgtcctaaaaatggatgaatctaga 52
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 100 caagtatttccggacggagggagta 124
|||||||||||||||||||||||||
Sbjct: 96 caagtatttccggacggagggagta 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 49 aatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtattt 108
|||||||||||||| |||||||||| |||| ||| |||| |||| | |||||||||||
Sbjct: 79 aatggatgtatctataactaaaataagtcta-gattcatccatttttaggacaagtattt 21
Query: 109 ccggacggagggagta 124
|||||||||||||
Sbjct: 20 ttagacggagggagta 5
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 53 gatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatttccgg 112
|||||||||| |||||||||| |||| ||||||| |||| | ||||||||||||||
Sbjct: 50 gatgtatctataactaaaataagtcta-gatacattcatttttaggacaagtatttccga 108
Query: 113 acggagggagta 124
||||||||||||
Sbjct: 109 acggagggagta 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||| ||||||||||||||
Sbjct: 31 gacaagtatttctggacggagggagta 5
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggat 55
||||| || ||||| ||||||||||||||||||||||||
Sbjct: 5 tactttcttcgtccgaaaatacttgtcatcaaaatggat 43
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 53 gatgtatctagaactaaaatacatctat 80
|||||| |||||||||||||||||||||
Sbjct: 51 gatgtacctagaactaaaatacatctat 78
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 acaagtatttccggacggagggagta 124
||||||||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctattt 93
||||||| |||| ||||||||||||||||||| |||| ||||||||
Sbjct: 36 aaatggacgtatttagaactaaaatacatcta-gatatatctattt 80
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||| || ||||||||||||| ||||||| ||||| ||| ||||
Sbjct: 45 aaaatggatgtatctacaattaaaatacatcta-gatacattcatttcttggacgagtaa 103
Query: 107 ttccggacggagggagta 124
||| | ||||||||||||
Sbjct: 104 ttctgaacggagggagta 121
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 acaagtatttccggacggagggagta 124
||||||||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggagta 120
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 atgtatctagaactaaaatacatcta 79
||||||||||||||||||||||||||
Sbjct: 47 atgtatctagaactaaaatacatcta 72
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagt 123
|||||||||||||| |||||||||||
Sbjct: 26 gacaagtatttccgaacggagggagt 1
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 26 cgtccaaaaatacttgtcatcaaaatggat 55
||||| ||||||||||||||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggat 43
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaa 49
|||| ||||||||| ||||||||||||||||||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaa 99
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 103 atgacaagtattttcggacggagggagta 131
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 57/65 (87%), Gaps = 3/65 (4%)
Strand = Plus / Minus
Query: 46 caaaatggatgtatct--agaactaaaatacatctatgatacatctatttcaatgacaag 103
||||||||| |||||| | |||||||||| ||||| |||||||||||||| | ||||||
Sbjct: 84 caaaatggacgtatctccataactaaaataaatcta-gatacatctatttctaggacaag 26
Query: 104 tattt 108
|||||
Sbjct: 25 tattt 21
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 acaagtatttccggacggagggagta 124
||||||||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggagta 137
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
||||| |||||| ||||||||||||| | || ||| |||| |||| ||| |||||| |
Sbjct: 80 aaatgaatgtatttagaactaaaatatgttta-gatgcatccatttttatgtcaagtaat 22
Query: 108 tccggacggagggagtaa 125
||||||||||||||||||
Sbjct: 21 tccggacggagggagtaa 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 97 tgacaagtatttccggacggagggagta 124
||||||||| ||||||||||||||||||
Sbjct: 94 tgacaagtaattccggacggagggagta 121
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum
(bread wheat)
Length = 124
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatcta 79
||||||||||||| |||||||||||||| ||||
Sbjct: 45 aaaatggatgtatgtagaactaaaatacgtcta 77
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 114 atgacaagtattttcggacggagggagta 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 53 gatgtatctagaactaaaatacatctatgatacatc 88
||||||| ||||||||||||||||||| ||||||||
Sbjct: 96 gatgtatgtagaactaaaatacatcta-gatacatc 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaa 48
|||| ||||||||| |||||||||||||||||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaa 111
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatt 107
||||| |||||| |||||||||||| |||||| |||||||| ||| ||||||||||
Sbjct: 46 aaatgaatgtatttagaactaaaatgcatcta-gatacatccattctttcgacaagtatt 104
Query: 108 tccggacggagggagta 124
| | |||||||||||||
Sbjct: 105 ttctgacggagggagta 121
>RF00906;MIR1122;AF254799.1/60623-60744 4513:Hordeum vulgare
Length = 122
Score = 50.1 bits (25), Expect = 8e-06
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatggatgtatctagaactaaaata 73
|||| |||| |||||||| ||||||| ||||||||||||||| ||||||||||||
Sbjct: 5 tactccctctgtccaaaattacttgttgccaaaatggatgtatc-agaactaaaata 60
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 48.1 bits (24), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 53 gatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatttccgg 112
||||||| || |||||||||| |||| ||||||| ||||| | |||| ||||||||||
Sbjct: 49 gatgtatgtataactaaaataagtcta-gatacattcatttcgaagacaggtatttccgg 107
Query: 113 acggagggagta 124
|||| |||||||
Sbjct: 108 acggggggagta 119
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 aaatggatgtatctagaactaaaa 71
||||||||||||||||||||||||
Sbjct: 37 aaatggatgtatctagaactaaaa 60
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 49 aatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtattt 108
|||||||||||| | |||||||||| || || ||||||| || | | |||||||||||
Sbjct: 46 aatggatgtatccataactaaaataaattta-gatacattcatctttaggacaagtattt 104
Query: 109 ccggacggagggagta 124
|||||||| |||||||
Sbjct: 105 ccggacggggggagta 120
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 gacaagtatttccggacggagggagtaa 125
|||||||||||||||||||||| |||||
Sbjct: 94 gacaagtatttccggacggaggtagtaa 121
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 90 atttcaatgacaagtatttccggacggagggagta 124
|||| |||||||||||||| ||||||||| |||||
Sbjct: 39 attttaatgacaagtattttcggacggagagagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 ctccgtccaaaaatacttgtcatcaaaatg 52
|||||||| |||||||||||||| ||||||
Sbjct: 11 ctccgtccgaaaatacttgtcattaaaatg 40
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
|||||||||||||||||||| ||||||
Sbjct: 31 gacaagtatttccggacggaaggagta 5
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 98 gacaagtatttccggacggagggagta 124
||||||||||| |||||||||||||||
Sbjct: 31 gacaagtatttgcggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
||||| |||||||||| |||||||||| |||| ||||| | ||||| | | |||||||
Sbjct: 44 aaaattgatgtatctataactaaaataagtctac-atacaaccatttctagggcaagtat 102
Query: 107 ttccggacggagggagtaa 125
|| | ||||||||||||||
Sbjct: 103 tttcagacggagggagtaa 121
>RF00906;MIR1122;EF104384.1/242-122 4567:Triticum turgidum subsp.
durum (durum wheat)
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 gacaagtatttccggacggagggagta 124
||||||| |||||||||||||||||||
Sbjct: 92 gacaagtttttccggacggagggagta 118
