miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 149 bits (75), Expect = 1e-35
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || ||||| |||||||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||||| |||||||||||||||||| ||||||| || ||||||||||||||||
Sbjct: 65 taaaatacgtctagatacatccatttctatgacaaataattccggacggagggag 119
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatg 66
||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 tactccctccgtccggaattatttgtcatagaaatggatg 82
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 133 bits (67), Expect = 8e-31
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||| ||||| || || ||||||||||||||||| ||||| ||||||||| |||
Sbjct: 121 tactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||
Sbjct: 61 taaaatacatctagatacacccatctcaatgacaagtattttcggacagagggag 7
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 133 bits (67), Expect = 8e-31
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||||||||| |||||| |||||||| |||||||| |||||| |||
Sbjct: 121 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||
Sbjct: 61 taaaatacatctagatacatccattcctatgacaaatatttccggacagagggag 7
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 116 tgacaagtatttccggacggagggag 141
||||||||| ||||||||||||||||
Sbjct: 94 tgacaagtaattccggacggagggag 119
>RF00906;MIR1122;CT009585.1/3980-4094 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
|||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 36 aaatggatgtgtctagaactaaaatacatctagatatatccatttcaatgacaagtattt 95
Query: 128 ccggacggagggag 141
|||||||||||||
Sbjct: 96 tcggacggagggag 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 96 tctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||| |||||||||| |||||||||| ||| ||||||||||||
Sbjct: 52 tctagacacatccattttgatgacaagtaattctggacggagggag 7
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 125
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 80 aaatggatgtatctagaactaaaatacatctagatacatccattcctatgacaagtattt 21
Query: 128 ccggacggagggag 141
|||||||| |||||
Sbjct: 20 ccggacggcgggag 7
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 111 bits (56), Expect = 3e-24
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 26 ttactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaa 85
||||||||||| | |||||||| ||||| |||||| || |||||||||||||||| ||
Sbjct: 122 ttactccctccatgcggaattacttgtcgcaaaaatgaatagaaatggatgtatctataa 63
Query: 86 ctaaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 62 ctaaaatacatctagatacatccattctttggacaagtatttccggacgaagggag 7
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||| || || ||||| | ||||| || ||||||||||||||| |||
Sbjct: 121 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 61 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggag 7
>RF00906;MIR1122;AF325196.1/33744-33620 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||| ||||||||||| ||||| |||||||| ||||||||||||||| ||
Sbjct: 5 tactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatctagaat 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatagattcatttctccgacaagtatttccggacggagggag 119
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 109 bits (55), Expect = 1e-23
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||| || || ||||| | ||||| || ||||||||||||||| |||
Sbjct: 5 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatccattcccccgacaagtatttccggacggagggag 119
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 101 bits (51), Expect = 3e-21
Identities = 100/115 (86%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || ||||| | ||||||||| | |||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcctaaaaatggatatat-tggatgtatctataac 63
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| ||||||||||| ||| || | |||||||||||||||||||||||||
Sbjct: 64 taaaataagtctagatacattcatctctaggacaagtatttccggacggagggag 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 gacaagtatttccggacggagggag 141
|||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggag 7
>RF00906;MIR1122;EU282737.1/1022-902 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 121
Score = 101 bits (51), Expect = 3e-21
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||||||||| |||||| ||||||||| ||||| |||||| || |||
Sbjct: 121 tactccctccgtccggaattacttgtcaccaaaatggaaataaatgaatgtatttagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| | ||||| ||||||||| ||| |||||| ||||||||||||||||
Sbjct: 61 taaaatatgtttagatgcatccatttttatgtcaagtaattccggacggagggag 7
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 26 ttactccctccgtccggaattatttgtcatcaaaatggatg 66
|||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 4 ttactccctccgtccggaattacttgacataaaaatggatg 44
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 116 tgacaagtatttccggacggagggag 141
||||||||| ||||||||||||||||
Sbjct: 94 tgacaagtaattccggacggagggag 119
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| |||||||||||| ||||||| ||| | |||||||| |||
Sbjct: 5 tactccctccgtccggaaatatttgtcatcagaatggataaaaagtggtgtatctagaac 64
Query: 87 taaaatacatctagatacatcc 108
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaa 58
|||||||||||||||||| || ||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaa 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 115 atgacaagtatttccggacggagggag 141
||||||| |||||||||||||||||||
Sbjct: 33 atgacaaatatttccggacggagggag 7
>RF00906;MIR1122;AF022725.1/11631-11507 4513:Hordeum vulgare
Length = 125
Score = 97.6 bits (49), Expect = 4e-20
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||||||||| |||||| ||||| || ||||||||||||||| ||
Sbjct: 5 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaat 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtattt 127
|| ||||||||||||||||| |||| | |||||||||||||
Sbjct: 65 tataatacatctagatacatacattcctatgacaagtattt 105
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 116 tgacaagtatttccggacggagggag 141
||||||||| ||||||||||||||||
Sbjct: 32 tgacaagtaattccggacggagggag 7
>RF00906;MIR1122;AY951945.1/93583-93458 4568:Triticum monococcum
Length = 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 100/116 (86%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || ||||| |||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatctagaac 64
Query: 87 taaaatacatc-tagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||| | |||||||||||| | ||||||||||| |||||||||||||
Sbjct: 65 taaaatacatctttgatacatccattcctcggacaagtattttcggacggagggag 120
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 gacaagtatttccggacggagggag 141
|||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggag 7
>RF00906;MIR1122;AY368673.1/196592-196716 4571:Triticum turgidum
Length = 125
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||| ||| || ||||| ||||| || ||||||||||||||| |||
Sbjct: 5 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||||| ||||| |||||||||| | |||||||||||||||||| |||||||
Sbjct: 65 taaaatacgtctaggtacatccattcctctgacaagtatttccggacagagggag 119
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatt 126
|||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 81 gaaatggatgtatctagaactgaaatacatctagatacatccatttccgcgacaagtatt 22
Query: 127 tccggacggagggag 141
|| |||| |||||||
Sbjct: 21 tcgggacagagggag 7
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 96 tctagatacatccatttcaatgacaagtatttcc 129
|||||||||||||||||| | |||||||| ||||
Sbjct: 64 tctagatacatccatttctacgacaagtaattcc 97
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 93.7 bits (47), Expect = 7e-19
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || |||| |||||||| ||||||||||||||| |||
Sbjct: 121 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||||| |||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 61 taaaatacgtctagatacatccatttctccgacaaataatttcggacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtc 53
||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccgaaattatttgtc 31
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || |||||||||||||||| ||| |||||||| || |||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggacaaaaagggatgtatttagaac 64
Query: 87 taaaatacatctagatacatcc 108
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatg 62
|||||||||||||||||| || ||||||||||||||
Sbjct: 131 tactccctccgtccggaaatacttgtcatcaaaatg 96
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 106 tccatttcaatgacaagtatttccggacggagggag 141
||||||| ||||||||||||| |||||||||||||
Sbjct: 42 tccattttgatgacaagtattttcggacggagggag 7
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 87.7 bits (44), Expect = 4e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 30 tccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaactaa 89
||||||||| || ||||| | |||| ||||||||| |||||||||||||||||| |||
Sbjct: 8 tccctccgttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaa 67
Query: 90 aatacatctagatacatccatttc 113
||||||||||||||||| ||||||
Sbjct: 68 aatacatctagatacattcatttc 91
>RF00906;MIR1122;EF028786.1/1091-968 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 85.7 bits (43), Expect = 2e-16
Identities = 98/115 (85%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||| ||||||||||| |||| | |||||||| ||||| |||||| || |||
Sbjct: 120 tactccctctgtccggaattacttgtgc-cgaaatggattaaaatgaatgtatttagaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
|||||||| |||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct: 61 taaaatacgtctagatacatcaatttctcagacaagtattttcggacggagggag 7
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccattt 112
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 81 gaaatggatgtatctataactaaaatacatctagatacatccattt 36
>RF00906;MIR1122;EU399684.1/4485-4371 4550:Secale cereale (rye)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
|||||||| |||||| ||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 36 aaatggatctatctagaactaaaatacgtctagatacatccatttctgagacaagtaatt 95
Query: 128 ccggacggagggag 141
||| ||||||||||
Sbjct: 96 ccgaacggagggag 109
>RF00906;MIR1122;DJ023136.1/240-116 4513:Hordeum vulgare
Length = 125
Score = 83.8 bits (42), Expect = 7e-16
Identities = 93/110 (84%)
Strand = Plus / Plus
Query: 32 cctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaactaaaa 91
|||||||||||||||| || || ||||||||| |||||| |||||| || ||||||||
Sbjct: 10 cctccgtccggaattacttatcgcaaaaatggatagaaatgaatgtatttagaactaaaa 69
Query: 92 tacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
| |||||||||||||||||| ||||||||||| | |||||||||||
Sbjct: 70 tgcatctagatacatccattctttcgacaagtattttctgacggagggag 119
>RF00906;MIR1122;EU159422.1/10160-10283 37682:Aegilops tauschii
Length = 124
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 57 aaaatggatggaaatggatgtatctacaactaaaatacatctagatacatccatttcaat 116
||||||||| ||||||||||||||| || |||||||| |||||||||||||||||| |
Sbjct: 91 aaaatggataaaaatggatgtatctagaagtaaaatacgtctagatacatccatttctct 32
Query: 117 gacaagtatttccg 130
||||||||| ||||
Sbjct: 31 gacaagtatatccg 18
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||| || || ||||||||||||||||| ||| |||| |||||| |||
Sbjct: 131 tactccctccgtccaaaaataattgtcatcaaaatggataaaaaaggatatatctaaaac 72
Query: 87 taaaatacatctagatacatc 107
||| |||||||||||||||||
Sbjct: 71 taatatacatctagatacatc 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 26 ttactccctccgtccggaattatttgtcatcaaaat 61
||||| ||||||||||||| || |||||||||||||
Sbjct: 4 ttacttcctccgtccggaaatacttgtcatcaaaat 39
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccat 110
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 80 gaaatggatgtatctagaactaaaatacatctagatacatccat 37
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccat 110
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 35 gaaatggatgtatctagaactaaaatacatctagatacatccat 78
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccatttc 113
||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 81 gaaatggatatatctaaaactaaaatacatctagatacatccatttc 35
>RF00906;MIR1122;DQ445241.1/4641-4518 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 77.8 bits (39), Expect = 4e-14
Identities = 97/115 (84%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || ||||||| |||||| || ||||||||||||||| ||
Sbjct: 120 tactccctccgtccggaaatacttgtcataaaaatgtata-aaatggatgtatctataag 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| |||||||||||| | || | ||||||||||| || ||| ||||||
Sbjct: 61 taaaataagtctagatacatctacttttaggacaagtattttcgaacgaagggag 7
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 atgacaagtatttccggacggagggag 141
|||||||||||||||||||||||||||
Sbjct: 92 atgacaagtatttccggacggagggag 118
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||| |||||||||||||| ||||| |||| || ||||| ||||||||| |||
Sbjct: 5 tactccgtccgtccggaattacttgtcgcacaaatatataaaaatgaatgtatctagaac 64
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| |||||||||||| |||| | ||| ||||||||| |||| ||||||||
Sbjct: 65 taaaatatatctagatacatacattcctatgccaagtattttcggatggagggag 119
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
|||| |||||||||| ||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 36 aaatagatgtatctagaactaaaatacgtctagatacatccattttcgcgacaagtaatt 95
Query: 128 ccggacggagggag 141
||| ||||||||||
Sbjct: 96 ccgaacggagggag 109
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttc 113
||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 36 aaatggatgtatctataactaaaatacatctagatacattcatttc 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 98 tagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||||||||||| |||||||||| ||||| ||||||||||
Sbjct: 50 tagatacatccatttttatgacaagtaattccgaacggagggag 7
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||| || || || ||||||||||||||||| || ||||||||| |||
Sbjct: 5 tactccctccgttcgaaaatacttgtcatcaaaatggataataagaaatgtatctagaac 64
Query: 87 taaaatacatctagatacatcc 108
||||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatcc 86
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 24 agttactccctccgtccggaattatttgtcatcaaaatggat 65
||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 135 agttactccctccgtccggaaatacttgtcaccaaaatggat 94
>RF00906;MIR1122;AM932682.1/94335-94221 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
||||||||||||||| |||| ||| | |||||||||||||||||| | |||||||| ||
Sbjct: 80 aaatggatgtatctagaactgaaaaatgtctagatacatccatttctacgacaagtaatt 21
Query: 128 ccggacggaggga 140
||| |||||||||
Sbjct: 20 ccgaacggaggga 8
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 73 gatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttccgga 132
|||||||||| |||||||||| ||||||||||| ||||| | |||||||||||||| |
Sbjct: 50 gatgtatctataactaaaataagtctagatacattcatttttaggacaagtatttccgaa 109
Query: 133 cggagggag 141
|||||||||
Sbjct: 110 cggagggag 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 108 catttcaatgacaagtatttccggacggagggag 141
|||||| | |||||||||||| ||||||||||||
Sbjct: 40 catttctaggacaagtatttctggacggagggag 7
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||| || |||||| || || ||||||||||||||||| ||| | ||||||||| ||
Sbjct: 5 tactcgcttcgtccgaaaatacttgtcatcaaaatggataaaaaagaatgtatctagaat 64
Query: 87 taaaatacatctagatacatc 107
|||||||||||||||||||||
Sbjct: 65 taaaatacatctagatacatc 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggat 65
||||| |||||||| ||| || |||||||||||||||||
Sbjct: 131 tactctctccgtccagaaatacttgtcatcaaaatggat 93
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 70 atggatgtatctacaactaaaatacatctagatacatccatttc 113
||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 38 atggatgtatctagaactaaaatacatctagatacattcatttc 81
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccat 110
||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 36 aaatggatgtatctagaactaaaatacatcttgatacatccat 78
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 36 aaatggatgtatctagaactaaaatatgtctagatacatccattttttcgacaagtaatt 95
Query: 128 ccggacggagggag 141
| | ||||||||||
Sbjct: 96 cagaacggagggag 109
>RF00906;MIR1122;AY533103.1/332-199 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || |||||||||||||| | ||| ||| |||||| |||
Sbjct: 130 tactccctccgtccgaaaatacttgtcatcaaaatgaacaaaaagagatatatctagaac 71
Query: 87 taaaatacatctagatacatcc 108
||||||||||||| ||||||||
Sbjct: 70 taaaatacatctaaatacatcc 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 atgacaagtatttccggacggagggag 141
||||||||||||| |||||||||||||
Sbjct: 102 atgacaagtattttcggacggagggag 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 32 cctccgtccggaattatttgtcatcaaaat 61
||||||||||||| || |||||||||||||
Sbjct: 9 cctccgtccggaaatacttgtcatcaaaat 38
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || |||||||||| ||| | ||| ||||||| || |||
Sbjct: 142 tactccctccgtccgaaaatacttgtcatcaatatgaacaaaaagagatgtatgtagaac 83
Query: 87 taaaatacatctagatacatcc 108
||||||||||||||||||||||
Sbjct: 82 taaaatacatctagatacatcc 61
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 atgacaagtatttccggacggagggag 141
||||||||||||| |||||||||||||
Sbjct: 114 atgacaagtattttcggacggagggag 140
>RF00906;MIR1122;AF521177.1/9890-9767 4513:Hordeum vulgare
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 69 aatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttc 128
||||||||||||||||| || |||| ||||||||||| ||| | | ||||||||||||
Sbjct: 46 aatggatgtatctacaattagaataagtctagatacattcatctgtaggacaagtatttc 105
Query: 129 cggacggagg 138
||||||||||
Sbjct: 106 cggacggagg 115
>RF00906;MIR1122;AY137517.1/112-234 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 73 gatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttccgga 132
||||||| || |||||||||| ||||||||||| |||||| | |||| |||||||||||
Sbjct: 49 gatgtatgtataactaaaataagtctagatacattcatttcgaagacaggtatttccgga 108
Query: 133 cggagggag 141
||| |||||
Sbjct: 109 cggggggag 117
>RF00906;MIR1122;AF474373.1/14703-14580 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 69 aatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttc 128
|||||||||||| | |||||||||| || ||||||||| ||| | | ||||||||||||
Sbjct: 46 aatggatgtatccataactaaaataaatttagatacattcatctttaggacaagtatttc 105
Query: 129 cggacggagggag 141
||||||| |||||
Sbjct: 106 cggacggggggag 118
>RF00906;MIR1122;AY853252.1/156228-156351 4513:Hordeum vulgare
Length = 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 69 aatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttc 128
|||||||||||||| |||||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 79 aatggatgtatctataactaaaataagtctagattcatccatttttaggacaagtatttt 20
Query: 129 cggacggagggag 141
|||||||||||
Sbjct: 19 tagacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 caagtatttccggacggagggag 141
|||||||||||||||||||||||
Sbjct: 96 caagtatttccggacggagggag 118
>RF00906;MIR1122;BT009083.1/864-988 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 31 ccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaactaaa 90
|||||| |||||||||| ||||| | |||||| | ||||| ||||||||| |||||||
Sbjct: 8 ccctccatccggaattacttgtcgtagaaatgggtaaaaatgaatgtatctagaactaaa 67
Query: 91 a-tacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
| ||| | |||||||||| ||||| |||| ||||||||||| ||||||||
Sbjct: 68 aatacgtttagatacatctatttctccgacaggtatttccggatggagggag 119
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatcta 82
|||||||||||||||||| || ||||||||||||||||| || |||||||||||
Sbjct: 5 tactccctccgtccggaaatacttgtcatcaaaatggataaaaggggatgtatcta 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || ||||||||||| || | ||| |||||||||| |||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaagtgactaaaaagagatgtatctagaac 72
Query: 87 taaaatacatctagatacatcc 108
||||||| |||||||||||||
Sbjct: 71 taaaatatgtctagatacatcc 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 atgacaagtatttccggacggagggag 141
||||||||||||| |||||||||||||
Sbjct: 103 atgacaagtattttcggacggagggag 129
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacatccatttc 113
|||||| ||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 81 gaaatgaatgtatctagaactaaaatacaactagatacatctatttc 35
>RF00906;MIR1122;AY663392.1/94965-94831 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 36 cgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaactaaaataca 95
|||||| || || ||||||||||||||||| ||| |||||| ||| ||||||||||||
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaaatgatgtacctagaactaaaataca 73
Query: 96 tctagatacat 106
|||| ||||||
Sbjct: 74 tctatatacat 84
>RF00906;MIR1122;AM932683.1/23310-23434 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 61.9 bits (31), Expect = 2e-09
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||| | ||| || ||||| |||||| || ||||||||| ||||| |||
Sbjct: 121 tactccctccgttcagaaatacttgtcgcaaaaatgaatataaatggatgcatctaaaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| |||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 61 taaaatatgtctaaatacatccattctttcgacaagtatttccggacggaaggag 7
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 36 cgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaactaaaataca 95
|||||| || || ||||||||||||||||| ||| |||||| ||| |||||||||| |
Sbjct: 14 cgtccgaaaatacttgtcatcaaaatggataaaaagagatgtacctagaactaaaatata 73
Query: 96 tctagatacat 106
|||||||||||
Sbjct: 74 tctagatacat 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 atgacaagtatttccggacggagggag 141
||||||||||||| |||||||||||||
Sbjct: 103 atgacaagtattttcggacggagggag 129
>RF00906;MIR1122;EU835980.1/752-629 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 61.9 bits (31), Expect = 2e-09
Identities = 95/115 (82%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || ||||| | ||||| || |||| |||||||||| |||
Sbjct: 5 tactccctccgtccgcaaatacttgtcctagaaatgaata-aaattgatgtatctataac 63
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagggag 141
||||||| |||| ||||| ||||||| | | ||||||||| | |||||||||||
Sbjct: 64 taaaataagtctacatacaaccatttctagggcaagtattttcagacggagggag 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 108 catttcaatgacaagtatttccggacggagggag 141
|||||| | ||||||||||| |||||||||||||
Sbjct: 40 catttctaggacaagtatttgcggacggagggag 7
>RF00906;MIR1122;CT009586.1/21808-21942 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
||||||||||||||| || || ||||||||||||||||| |||| |||||| || |||
Sbjct: 131 tactccctccgtccgaaaatacttgtcatcaaaatggataaaaataaatgtatttagaac 72
Query: 87 taaaata 93
|||||||
Sbjct: 71 taaaata 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 105 atccatttcaatgacaagtatttccggacggagggag 141
|||||||| ||||||||||||| |||||||||||||
Sbjct: 93 atccattttgatgacaagtattttcggacggagggag 129
>RF00906;MIR1122;AK249975.1/2279-2156 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
|||||| ||||| || |||||||||| |||| ||||||| |||| | |||||||||||
Sbjct: 80 aaatgggtgtatttataactaaaataattctacatacatctatttttaagacaagtattt 21
Query: 128 ccggacggagggag 141
||||| ||||||||
Sbjct: 20 ccggatggagggag 7
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 74 atgtatctacaactaaaatacatctagatacat 106
||||||||| |||||||||||||||||||||||
Sbjct: 47 atgtatctagaactaaaatacatctagatacat 79
>RF00906;MIR1122;DQ445236.1/8526-8403 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 69 aatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttc 128
|||||||||||||| |||||||||| |||||||| || ||| | |||||||||||
Sbjct: 46 aatggatgtatctataactaaaataagtctagatatattcatccttagaacaagtatttc 105
Query: 129 cggacggagggag 141
|||||||||||||
Sbjct: 106 cggacggagggag 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 117 gacaagtatttccggacggagggag 141
|||||||||||||||||||||||||
Sbjct: 31 gacaagtatttccggacggagggag 7
>RF00906;MIR1122;AY485644.1/203741-203618 4568:Triticum monococcum
Length = 124
Score = 56.0 bits (28), Expect = 2e-07
Identities = 92/112 (82%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggatggaaatggatgtatctacaac 86
|||||||||||||||||| || |||| ||||||||| ||||| |||| | || |||
Sbjct: 120 tactccctccgtccggaaatacttgtggg-aaaatggataaaaatgaatgtgtataaaac 62
Query: 87 taaaatacatctagatacatccatttcaatgacaagtatttccggacggagg 138
|||| || ||||||| |||||||||| ||||||||||||| ||||||||
Sbjct: 61 taaagcacgtctagatgcatccatttctccgacaagtatttccagacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 acaagtatttccggacggagggag 141
||||||||||||||||||||||||
Sbjct: 95 acaagtatttccggacggagggag 118
>RF00906;MIR1122;AK250831.1/1328-1188 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 84 aactaaaatacatctagatacatccatttcaatgacaagtattt 127
|||||||||| ||||||||||||| ||||| | |||||||||||
Sbjct: 64 aactaaaataaatctagatacatctatttctaggacaagtattt 21
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 acaagtatttccggacggagggag 141
||||||||||||||||||||||||
Sbjct: 112 acaagtatttccggacggagggag 135
>RF00906;MIR1122;DQ245819.1/394-508 4577:Zea mays
Length = 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 66 ggaaatggatgtatctacaactaaaatacatctagatacatccattt 112
||||||||| |||| || |||||||||||||||||||| ||| ||||
Sbjct: 34 ggaaatggacgtatttagaactaaaatacatctagatatatctattt 80
>RF00906;MIR1122;DQ889708.1/343-221 4565:Triticum aestivum (bread
wheat)
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccatttcaatgacaagtattt 127
||||| ||||||||| |||||||| | |||||||||||||||||| |||||||| ||
Sbjct: 88 aaatgaatgtatctagaactaaaactcgtctagatacatccatttctgcgacaagtaatt 29
Query: 128 ccg 130
|||
Sbjct: 28 ccg 26
>RF00906;MIR1122;FJ427399.1/11963-11864 4571:Triticum turgidum
Length = 100
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggat 65
||||||||||||||| || || |||||||||||||||||
Sbjct: 5 tactccctccgtccgaaaatacttgtcatcaaaatggat 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 105 atccatttcaatgacaagtatttccggacggagggag 141
|||||||| ||||||||||||| |||||||||||||
Sbjct: 43 atccattttgatgacaagtattttcggacggagggag 7
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 27 tactccctccgtccggaattatttgtcatcaaaatggat 65
|||| |||||||||| || || |||||||||||||||||
Sbjct: 96 tacttcctccgtccgaaaatacttgtcatcaaaatggat 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 105 atccatttcaatgacaagtatttccggacggagg 138
|||||||| ||||||||||||| ||||||||||
Sbjct: 58 atccattttgatgacaagtattttcggacggagg 91
>RF00906;MIR1122;AY641411.1/11483-11599 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 117
Score = 54.0 bits (27), Expect = 6e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 67 gaaatggatgtatctacaact-aaaatacatctagatacatccattt 112
|||||||||||||||| |||| ||||| | |||||||||||||||||
Sbjct: 36 gaaatggatgtatctagaactaaaaatgcgtctagatacatccattt 82
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 76 gtatctacaactaaaatacatctagatacatccatttcaatgacaagtatttccggacgg 135
||||||| || ||||||| |||||||||||| ||| || | ||||||||||||| ||||
Sbjct: 72 gtatctataattaaaataaatctagatacattcatctctaaaacaagtatttccgaacgg 13
Query: 136 agg 138
|||
Sbjct: 12 agg 10
>RF00906;MIR1122;AB095006.1/1949-2072 4565:Triticum aestivum (bread
wheat)
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacatccattt 112
|||||||||||| || ||||||||||| |||| |||||| |||||
Sbjct: 46 aaatggatgtatgtagaactaaaatacgtctaaatacattcattt 90
>RF00906;MIR1122;AY146587.2/148630-148744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 67 gaaatggatgtatctacaactaaaatacatctagatacat 106
|||||| ||||||||| || ||||||| ||||||||||||
Sbjct: 35 gaaatgaatgtatctagaattaaaataaatctagatacat 74
>RF00906;MIR1122;DQ355219.1/57-171 4588:Lophopyrum elongatum
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 68 aaatggatgtatctacaactaaaatacatctagatacat 106
||||||||||||||| ||| |||||| |||||||||||
Sbjct: 36 aaatggatgtatctagcactgaaatacgtctagatacat 74
>RF00906;MIR1122;AY951949.1/1544-1411 4568:Triticum monococcum
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 108 catttcaatgacaagtatttccggacggag 137
||||| |||||||||||||| |||||||||
Sbjct: 40 cattttaatgacaagtattttcggacggag 11
