miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 9 tattactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaac 68
||||||||||| ||||||||||||||| | | ||||||| | |||||| ||||||| ||
Sbjct: 92 tattactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaat 33
Query: 69 gcttttatatttgtttacagagggagt 95
||| ||||||| |||||||||||||||
Sbjct: 32 gctcttatattagtttacagagggagt 6
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 79.8 bits (40), Expect = 6e-15
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| | |||| ||||||| | | |||||||||||||| | |||||||||| |||
Sbjct: 89 tactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgct 30
Query: 72 tttatatttgtttacagagggagt 95
|||||||| |||||||||||||||
Sbjct: 29 tttatattagtttacagagggagt 6
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||| ||||||||| | |||||| || |||| | |||||||||||| |
Sbjct: 5 tactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgtt 64
Query: 72 tttatatttgtttacagagggagt 95
||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacagagggagt 88
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 62 tctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||||||| |||||| ||||||||
Sbjct: 39 tctaaacgcttttatattagtttacggagggagt 6
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 71.9 bits (36), Expect = 2e-12
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||||| |||| ||||||||| | ||||||| ||||| || |||||||||| |||
Sbjct: 5 tactcccttcataaactaatataaaagcgtttagatcattaa-gtagtgatctaaatgct 63
Query: 72 tttatatttgtttacagagggagt 95
||||||| |||||||||||||||
Sbjct: 64 cttatattagtttacagagggagt 87
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 59 tgatctaaacgcttttatatttgttta 85
||||||||||||||||||||| |||||
Sbjct: 42 tgatctaaacgcttttatattagttta 16
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||| ||||||| | | |||||| || |||| | ||||||||||||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 72 tttatatttgtttacagagggagt 95
||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 gtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgcttttatatttg 81
|||||||||||||| | | ||||||| | | |||| |||||||||||||| ||||||||
Sbjct: 15 gtaaagaaatataagagcgtttagatcactgaagtagtgatctaaacgctcttatatttc 74
Query: 82 tttacagaggg 92
|||||||||||
Sbjct: 75 tttacagaggg 85
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagg 91
|||||||||||||| |||||||| ||||||||||
Sbjct: 43 gtgatctaaacgctcttatatttctttacagagg 10
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 51 taaagttgtgatctaaacgcttttatatttgtttacagag 90
|||||| |||||||||||||| ||||||||||||||||||
Sbjct: 50 taaagtagtgatctaaacgctcttatatttgtttacagag 11
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 71/84 (84%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| ||||| ||||||| | | ||||||||| |||||| ||| |||||| |||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 72 tttatatttgtttacagagggagt 95
|||||||| |||||||| ||||||
Sbjct: 65 tttatattagtttacagggggagt 88
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 61 atctaaacgcttttatatttgtttacagagggagt 95
||||||||||| ||||||| |||||||||||||||
Sbjct: 40 atctaaacgctcttatattagtttacagagggagt 6
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 29 aatataaaaccctttagattattaaagttgtgatctaaacgcttttatatttgtttacag 88
||||||| ||| ||||||| | |||||| |||||||||| | | ||||||| ||||||||
Sbjct: 22 aatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagtttacag 81
Query: 89 agggagt 95
|||||||
Sbjct: 82 agggagt 88
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 41 tttagattattaaagttgtgatctaaacgcttttatatttgtttacagagggagt 95
||||||| |||||| || ||| ||||||||| ||||||| |||||||||||||||
Sbjct: 60 tttagatcattaaaattatgacctaaacgctcttatattagtttacagagggagt 6
Score = 56.0 bits (28), Expect = 9e-08
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||| ||||||| | | ||||||| |||||| | ||||||||||||||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 72 tttatatt 79
|||||||
Sbjct: 74 cttatatt 67
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 41 tttagattattaaagttgtgatctaaacgcttttatatttgtttacagagggagt 95
||||||| | |||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct: 32 tttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagt 86
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 42 ttagattattaaagttgtgatctaaacgcttttatatttgtttacagagggagt 95
|||||| | |||||| ||||||||| |||| ||||||| |||||||||||||||
Sbjct: 59 ttagatcactaaagtagtgatctaagcgctcttatattagtttacagagggagt 6
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
||||||||| |||| ||||||| |||||||||||||||
Sbjct: 51 gtgatctaagcgctcttatattagtttacagagggagt 88
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||| ||||||| |||||||||||||||
Sbjct: 43 gtgatctaaacgctcttatattagtttacagagggagt 6
Score = 48.1 bits (24), Expect = 2e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| ||||| ||||||| | | ||||||| | |||||| ||||||||||||||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 72 tttatatt 79
|||||||
Sbjct: 65 cttatatt 72
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||| |||||||| ||||||||||||||
Sbjct: 45 gtgatctaaacgctcttatatttctttacagagggagt 82
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 59 tgatctaaacgcttttatatttgtttacagagggagt 95
||||||||||||| |||||||| ||||||||||||||
Sbjct: 42 tgatctaaacgctcttatatttctttacagagggagt 6
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 15 tcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgctttt 74
||||| |||||| ||||||| | | |||||| || |||||| ||||||||| ||||||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 75 atatttgtttacagagggagt 95
||||| ||||||| |||||||
Sbjct: 68 atattagtttacaaagggagt 88
>RF00906;MIR1122;AY485644.1/177748-177656 4568:Triticum monococcum
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 15 tcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgctttt 74
|||||| ||||| ||||||| | | || |||| |||||| ||||||||||||| || ||
Sbjct: 8 tccctttgtaaactaatataagagcgttgagatcattaaaattgtgatctaaactctctt 67
Query: 75 atatttgtttacagagggagt 95
||||| |||||| ||||||||
Sbjct: 68 atattagtttacggagggagt 88
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 71/85 (83%)
Strand = Plus / Minus
Query: 11 ttactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgc 70
||||||||| |||||| ||||||| | | ||||||||| || | |||||||||| ||
Sbjct: 90 ttactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgc 31
Query: 71 ttttatatttgtttacagagggagt 95
| ||||||| |||||||||||||||
Sbjct: 30 tcttatattagtttacagagggagt 6
Score = 52.0 bits (26), Expect = 1e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 10 attactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacg 69
|||||||||| ||||| ||||||| | | ||||||| | |||| | || |||||||||
Sbjct: 3 attactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacg 62
Query: 70 cttttatatttgtttacagagggagt 95
|| ||||||| |||||| ||||||||
Sbjct: 63 ctcttatattagtttacggagggagt 88
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| ||||| ||||||||| |||| |||| |||| | ||||||||||| ||
Sbjct: 89 tactccctctgtaaactaatataaaagtttttaaattactaaactagtgatctaaacact 30
Query: 72 tttatatttgtttacagagggagt 95
||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 cttttatatttgtttacagagggagt 95
|||||||||| |||||||||||||||
Sbjct: 63 cttttatattagtttacagagggagt 88
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||||||||||| | | |||||| | |||||| || ||||||| |||
Sbjct: 5 tactccctcggtaaagaaatataagagcgtttagagcactaaagtagttatctaaatgct 64
Query: 72 tttatatttgtttacagagggagt 95
|||||||| |||| |||||||||
Sbjct: 65 cttatatttctttatagagggagt 88
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||| |||||||||| | ||||||| | |||||| || ||||||| | |
Sbjct: 5 tactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaatgat 64
Query: 72 tttatatttgtttacagagggagt 95
|||||||| ||||||||||||||
Sbjct: 65 cttatatttctttacagagggagt 88
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 60 gatctaaacgcttttatatttgtttacagagggagt 95
||||||||||| |||||||||||||||||||||||
Sbjct: 41 gatctaaacgcccttatatttgtttacagagggagt 6
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagaggga 93
|||||||||||||| |||||||| ||||| ||||||
Sbjct: 51 gtgatctaaacgctcttatatttctttactgaggga 86
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 9 tattactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaac 68
||||||||||| |||||| ||||||| | ||||||||| || | ||||||||||
Sbjct: 2 tattactccctccgtaaactaatataagagtgtttagattactactttagtgatctaaat 61
Query: 69 gcttttatatttgtttacagagggagt 95
| ||||||||| |||||||||||||||
Sbjct: 62 gtttttatattagtttacagagggagt 88
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 61 atctaaacgcttttatatttgtttacagagggagt 95
|||||||| |||||||||| |||||||||||||||
Sbjct: 40 atctaaacacttttatattagtttacagagggagt 6
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||| ||||||| |||||| ||||||||
Sbjct: 51 gtgatctaaacgctcttatattagtttactgagggagt 88
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||| | |||||||| ||||||||||||||
Sbjct: 43 gtgatctaaacgatcttatatttctttacagagggagt 6
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||| ||| ||||||| |||||||||||||||
Sbjct: 43 gtgatctaaaagctcttatattagtttacagagggagt 6
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 22 gtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgcttttatatttg 81
|||||||||||||| | | | ||||| | |||||| || |||||||| || ||||||||
Sbjct: 15 gtaaagaaatataagagcgtctagatcactaaagtagttatctaaacactcttatatttc 74
Query: 82 tttacagagggagt 95
||||| ||||||||
Sbjct: 75 tttacggagggagt 88
>RF00906;MIR1122;EU282299.1/528-618 97361:Hordeum murinum
Length = 91
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagg 91
|||||||||| ||||||||||| |||||||||||
Sbjct: 42 gtgatctaaatgcttttatattagtttacagagg 9
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| ||||| ||||||| | | |||| || |||||| | ||||||||||| ||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 72 tttatatttgtttacagagggagt 95
||||||| |||||| ||||||||
Sbjct: 29 cttatattagtttacggagggagt 6
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||| ||||||| | | ||||| | | |||| | |||||||||| |||
Sbjct: 5 tactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgct 64
Query: 72 tttatatttgtttacagagg 91
||||||| |||||||||||
Sbjct: 65 cttatattagtttacagagg 84
>RF00906;MIR1122;EU096089.1/23929-24021 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 64 taaacgcttttatatttgtttacagagggagt 95
|||| ||||||||||| |||||||||||||||
Sbjct: 37 taaatgcttttatattagtttacagagggagt 6
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 12 tactcccttcgtaaagaaatataaaaccctttagattattaaagttgtgatctaaacgct 71
|||||||| |||||| ||||||| | | ||||||||| || | ||||||||||||||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 72 tttatatttgtttacagagggagt 95
||||| | ||||||||| |||||
Sbjct: 65 cttatagtagtttacagacggagt 88
Score = 46.1 bits (23), Expect = 9e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 41 tttagattattaaagttgtgatctaaacgcttttatatttgtttacagagggagt 95
||||||| | |||||| || ||||||||||| ||||||| ||||| ||||||||
Sbjct: 60 tttagatcactaaagtagtaatctaaacgctcttatattaatttacggagggagt 6
>RF00906;MIR1122;EU626553.1/72905-73004 4572:Triticum urartu
Length = 100
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagaggg 92
|||||||||| ||| ||||||| ||||||||||||
Sbjct: 43 gtgatctaaatgctcttatattagtttacagaggg 9
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 65 aaacgcttttatatttgtttacagagggagt 95
||||||| ||||||| |||||||||||||||
Sbjct: 65 aaacgctcttatattagtttacagagggagt 95
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 61 atctaaacgcttttatatttgtttacagagggagt 95
|||||||| || ||||||| |||||||||||||||
Sbjct: 40 atctaaacactcttatattagtttacagagggagt 6
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||| | |||||| || |||||||||||
Sbjct: 43 gtgatctaaacgctctcatatttattcacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||||||| ||||||| |||||| |||||||
Sbjct: 54 gtgatctaaacgctcttatattattttacatagggagt 91
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
||||||||||| || ||||||| ||||| |||||||||
Sbjct: 43 gtgatctaaacactcttatattggtttatagagggagt 6
>RF00906;MIR1122;AF458277.1/188-282 85692:Triticum turgidum subsp.
dicoccoides
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||||||| | | ||||||| |||||||||||||||
Sbjct: 53 gtgatctaaaaggtcttatattagtttacagagggagt 90
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 58 gtgatctaaacgcttttatatttgtttacagagggagt 95
|||||| ||||||| ||||||| ||||||||||||||
Sbjct: 43 gtgatccaaacgctcttatattaatttacagagggagt 6
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 58 gtgatctaaacgcttttatatttgtttacagagg 91
|||||||||||||| ||||||| |||||| ||||
Sbjct: 51 gtgatctaaacgctcttatattagtttacggagg 84
