miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 202 bits (102), Expect = 9e-52
Identities = 111/114 (97%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttagatttgtctaaatacggatgtatcaagtca 64
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttgg 120
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 65 cgttttagtattagatacatccgtatctaggcaaatctaagacaagaattttgg 118
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 80 gatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 58 gatacatccgtatttagacaaatctaagacaagaattttggga 16
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||
Sbjct: 132 atacttcctccgttccaaaattcttgtcttagatttgcctagatacggatgtatc 78
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 200 bits (101), Expect = 4e-51
Identities = 113/117 (96%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtc 65
||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 4 atactccttctgtcccaaaattcttgtcttagatttttctaaatagggatgtatcaactc 63
Query: 66 acgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 acgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 133 aatactccctccgtcccaaaattcttgtcttagatttgtctagatatggatgtatc 78
>RF00906;MIR1122;AM932686.1/57613-57747 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 172 bits (87), Expect = 8e-43
Identities = 121/131 (92%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 5 tactccctcggtcccaaaattcttgtcttagatttgtctagatacggatgtatcaagtca 64
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga-tga 125
| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||| ||
Sbjct: 65 cattttcgtattagatacatctgtatctagacaaatctaagacaagaaatttgggacaga 124
Query: 126 gggagtagttg 136
|||||||||||
Sbjct: 125 gggagtagttg 135
Score = 81.8 bits (41), Expect = 2e-15
Identities = 100/117 (85%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||| |||||||| |||||||||||||||| |||| |||| |||||||| | | |
Sbjct: 131 tactccctctgtcccaaatttcttgtcttagatttgtctagatacagatgtatctaat-a 73
Query: 67 cgttttagt-attagatacatccatatctagacaaatctaagacaagaattttggga 122
|| || | | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 72 cgaaaatgtgacttgatacatccgtatctagacaaatctaagacaagaattttggga 16
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium piliferum
Length = 135
Score = 165 bits (83), Expect = 2e-40
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagt 64
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 3 aatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagt 62
Query: 65 cacgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga 122
|| |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||||||
Sbjct: 63 catgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttggga 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaattcttgtcttagattt 41
||||||||||||||||||||||||| |||||||||||
Sbjct: 133 aatactccctccgtcccaaaattctngtcttagattt 97
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||||| ||| |||||||||||| ||||||||||||||||
Sbjct: 60 tagatacatccgtatttagacaaatctatgacaagaattttggga 16
>RF00906;MIR1122;EF540321.1/52965-52831 4571:Triticum turgidum
Length = 135
Score = 147 bits (74), Expect = 5e-35
Identities = 104/114 (91%)
Strand = Plus / Minus
Query: 11 ccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtcacgtt 70
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||| || ||
Sbjct: 127 ccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagttacatt 68
Query: 71 ttagtattagatacatccatatctagacaaatctaagacaagaattttgggatg 124
||||| ||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 67 ttagtgttagatacatctttatctaaacaaatgtaagacaagaattttgggatg 14
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 76 tagatacatccgtatttagacaaatttaagacaagaattttggga 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 10 tccctccgtcccaaaattcttgtcttagattt 41
||||||| ||||||||||||||||||| ||||
Sbjct: 8 tccctccatcccaaaattcttgtcttacattt 39
>RF00906;MIR1122;EU660895.1/53244-53110 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 145 bits (73), Expect = 2e-34
Identities = 103/113 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
|||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 131 tactccctccatcccaaaattcttgtcttagatttgtctaaatacggatgtatgaagtca 72
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttg 119
||||||||||| |||||| ||||||||||||| ||||||||||||||||
Sbjct: 71 tattttagtattaaatacatatgtatctagacaaatgtaagacaagaattttg 19
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 81 atacatccatatctagacaaatctaagacaagaattttgggat-gagggagtagttg 136
|||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 79 atacatccgtatttagacaaatctaagacaagaattttgggatggagggagtagttg 135
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 139 bits (70), Expect = 1e-32
Identities = 106/118 (89%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||||||||||||||| |||||||| |||| |||||||| |||||||| ||| |
Sbjct: 5 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 64
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttgggatg 124
| ||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 65 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatg 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 10 tccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
||||||| ||||||||||||||||||| |||| | || |||||||||||||
Sbjct: 128 tccctccatcccaaaattcttgtcttacatttgtttagatacggatgtatc 78
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 81 atacatccatatctagacaaatctaagacaagaattttggga 122
|||||||||||| ||||||||| |||||||| ||||||||||
Sbjct: 57 atacatccatatttagacaaatttaagacaacaattttggga 16
>RF00906;MIR1122;AY853252.1/217307-217173 4513:Hordeum vulgare
Length = 135
Score = 137 bits (69), Expect = 4e-32
Identities = 105/117 (89%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtc 65
||||||||||| || ||||||||| |||||| |||| |||||||| ||||||||| ||||
Sbjct: 4 atactccctccatctcaaaattctggtcttaaatttctctaaatatggatgtatctagtc 63
Query: 66 acgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 64 acgttttagtgttagatacatccgtatctagataaatcctagacaagaattttggga 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
|||| ||||||||||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 131 tactacctccgtcccaaaattcttgtctaggatttatctagatacggatgtatc 78
Score = 56.0 bits (28), Expect = 1e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttgggat-gagggagta 132
||||||||||||||| |||| |||| |||||| ||||||||| ||| |||||||||
Sbjct: 60 tagatacatccatatttagagaaatttaagaccagaattttgagatggagggagta 5
>RF00906;MIR1122;EU660901.1/93085-92951 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 135 bits (68), Expect = 2e-31
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||| |||||||| |||||||||||||| |||| |||||| ||| |||||||||||||
Sbjct: 5 tactcgctccgtcctgaaattcttgtcttaaatttgtctaaagacgaatgtatcaagtca 64
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||| ||||||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 65 cgtttttgtattagatacatccgtatctagacaaagctacaacaagaattttggga 120
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
|||||||||||||||||||||||||| ||| ||| |||| |||||||||||||
Sbjct: 131 tactccctccgtcccaaaattcttgttgtagctttgtctagatacggatgtatc 78
>RF00906;MIR1122;DQ145528.1/676-542 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 135
Score = 125 bits (63), Expect = 2e-28
Identities = 98/107 (91%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 17 gtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtcacgttttagta 76
||||||||||||||||||||||||| |||||||| | ||||||| ||||| |||||||||
Sbjct: 15 gtcccaaaattcttgtcttagatttgtctaaatatgaatgtatctagtcatgttttagta 74
Query: 77 -ttagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct: 75 tttagatacatccatttctagac-aatttaagacaagaattttggga 120
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 60 tagatacattcatatttagacaaatctaagacaagaattttggga 16
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtctta 36
||||| ||||||||||||||||||||||||
Sbjct: 131 tactctctccgtcccaaaattcttgtctta 102
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 121 bits (61), Expect = 3e-27
Identities = 104/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
|||||||||||||||||||||||||||||| |||| |||| ||| | ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttacatttgtctagatatgaatgtatctagtca 64
Query: 67 cgttttagta-ttagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||||||| || |||||||| || |||| ||||| |||||||||||||||||||
Sbjct: 65 cgttttagtattttgatacatctatttctaaacaaacttaagacaagaattttggga 121
Score = 77.8 bits (39), Expect = 3e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga-tgagggagtagtt 135
||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 60 tagatacattcatatctagacaaatgtaagacaagaattttgggacggagggagtagtt 2
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 115 bits (58), Expect = 2e-25
Identities = 101/114 (88%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtc 65
||||||||||||| |||||||||||||||||||||| | || ||| | ||||||| |||
Sbjct: 4 atactccctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtt 63
Query: 66 acgttttagta-ttagatacatccatatctagacaaatctaagacaagaatttt 118
| ||||||||| ||||||||||| || |||||||||| ||||||||||||||||
Sbjct: 64 aagttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 117
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttgg 120
||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaagaattttgg 18
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaattcttgtcttagatttttcta 46
|||||||||||||||| |||||||||||||||| ||| ||||
Sbjct: 134 aatactccctccgtcctaaaattcttgtcttagctttgtcta 93
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 113 bits (57), Expect = 6e-25
Identities = 103/117 (88%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||||||||||||||| ||||||||||||| | || ||| | ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaattattgtcttagatttgtttagatatgaatgtatctagtca 64
Query: 67 cgttttagt-attagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||||| |||||||||||| || |||| ||||| |||||||||||||||||||
Sbjct: 65 agttttagtaattagatacatctatttctaaacaaagttaagacaagaattttggga 121
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 60 tagatacattcatatctaaacaaatctaagacaataattttggga 16
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaattcttgtctta 36
|||||||||||| |||||||||||||||||||||
Sbjct: 136 ataatactcccttcgtcccaaaattcttgtctta 103
>RF00906;MIR1122;AF254799.1/46723-46588 4513:Hordeum vulgare
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 101/115 (87%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
|||||| ||||||||||||||||||||||| |||| |||| ||| | ||||||| |||||
Sbjct: 5 tactccttccgtcccaaaattcttgtcttaaatttgtctatatatgaatgtatctagtca 64
Query: 67 cgttttagta-ttagatacatccatatctagacaaatctaagacaagaattttgg 120
| ||||||| |||||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 65 tggtttagtatttagatacatccatgtgtagacaatgctaagacaagaattttgg 119
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttggga 122
||||||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 60 tagatacattcatatatagacaaatttaagacaagaattttggga 16
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaattcttgtcttag 37
|||||||||||||| ||||||||||||||||||
Sbjct: 134 aatactccctccgttccaaaattcttgtcttag 102
>RF00906;MIR1122;DQ890004.1/48-183 4513:Hordeum vulgare
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 100/114 (87%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtc 65
||||| ||||||| |||||||||||||||||||||| | || ||| | ||||||| |||
Sbjct: 133 atactacctccgttccaaaattcttgtcttagatttgtttagatatgaatgtatctagtt 74
Query: 66 acgttttagta-ttagatacatccatatctagacaaatctaagacaagaatttt 118
| ||||||||| ||||||||||| || |||||||||| ||||||||||||||||
Sbjct: 73 aagttttagtatttagatacatcaatttctagacaaagctaagacaagaatttt 20
Score = 69.9 bits (35), Expect = 9e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttgg 120
||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 77 tagatacattcatatctaaacaaatctaagacaagaattttgg 119
Score = 60.0 bits (30), Expect = 8e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaattcttgtcttagatttttcta 46
|||||||||||||||| |||||||||||||||| ||| ||||
Sbjct: 3 aatactccctccgtcctaaaattcttgtcttagctttgtcta 44
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 101 bits (51), Expect = 2e-21
Identities = 108/126 (85%), Gaps = 7/126 (5%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaag 63
||||||||||||||||||||| |||||||||||||||| |||| ||| | |||||| ||
Sbjct: 2 taatactccctccgtcccaaacttcttgtcttagatttgtctagatatgaatgtatgtag 61
Query: 64 tcacgttttagta-ttaga------tacatccatatctagacaaatctaagacaagaatt 116
||||||||| ||| ||||| ||||||||| | |||||||| ||||||||||||||
Sbjct: 62 tcacgttttggtatttagatacacctacatccatttatagacaaacctaagacaagaatt 121
Query: 117 ttggga 122
||||||
Sbjct: 122 ttggga 127
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 81 atacatccatatctagacaaatctaagacaagaattttggga 122
|||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 57 atacattcatatctagacaaatctaagacaagaagtttggga 16
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttcta 46
|||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 139 atactccctccgtcccaaaattcttgtcttaggtttgtcta 99
>RF00906;MIR1122;AY853252.1/33762-33628 4513:Hordeum vulgare
Length = 135
Score = 95.6 bits (48), Expect = 1e-19
Identities = 111/128 (86%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||||||| ||||||||||| |||| |||| | || ||||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaattcttgccttatatttgtttagatacgaatgtatctagtca 64
Query: 67 cgttttagtatt-agatacatccatatctagacaaatctaagacaagaattttgggat-g 124
||| |||||| ||||||||||| |||||||||| |||||||||||||||||| || |
Sbjct: 65 aattt-agtatttagatacatccagttctagacaaagctaagacaagaattttggaatgg 123
Query: 125 agggagta 132
||||||||
Sbjct: 124 agggagta 131
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttcta 46
||||||||||| | |||||||||||||||||| ||| ||||
Sbjct: 132 atactccctccattccaaaattcttgtcttagctttgtcta 92
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttg 119
||||||||| | |||||| |||||| |||| |||||||||||
Sbjct: 60 tagatacattcgtatctaaacaaatataaggcaagaattttg 19
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 91.7 bits (46), Expect = 2e-18
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
|||||||||||| ||||| | |||||||| ||||| |||| ||||||||||||| || |
Sbjct: 131 tactccctccgttccaaattacttgtcttggatttgtctagatacggatgtatctagact 72
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaag 112
| ||||||| |||||| ||| |||||||||||||||||||||||
Sbjct: 71 cattttagtgctagatatctccgtatctagacaaatctaagacaag 26
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tagatacatccatatctagacaaatctaagacaag 112
||||||||||| |||||||||||||| ||||||||
Sbjct: 76 tagatacatccgtatctagacaaatccaagacaag 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacgga 54
|||||||||||| || || | |||||||||||||| |||| |||||||
Sbjct: 5 tactccctccgttccgaattacttgtcttagatttgtctagatacgga 52
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 89.7 bits (45), Expect = 9e-18
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
||||||||||||| ||||||| |||| || |||| |||| ||| ||||||||| ||| |
Sbjct: 5 tactccctccgtctcaaaattattgttttgaatttgtctagatatggatgtatctagtta 64
Query: 67 cgttttagta-ttagatacatccatatctagacaaatctaagacaagaattttggga 122
| |||||||| ||| || |||||||||||| | | ||||||||||||||||||||||
Sbjct: 65 cattttagtatttaaatgcatccatatctaaaaacatctaagacaagaattttggga 121
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatg 56
|||||||||||||||||||||||||||||||||| ||| || ||| |||||
Sbjct: 133 atactccctccgtcccaaaattcttgtcttagatgtttttagatatggatg 83
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaagaattttg 119
||||||||||||||||||||||||| || |||| |||||||
Sbjct: 60 tagatacatccatatctagacaaattcaaaacaataattttg 19
>RF00906;MIR1122;AP009567.1/9225-9090 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 77.8 bits (39), Expect = 3e-14
Identities = 97/115 (84%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagt 64
||||||||||| ||| |||||||||||||||||||| |||| ||| | ||||||| | |
Sbjct: 3 aatactccctctgtcataaaattcttgtcttagatttgtctagatatgaatgtatctaat 62
Query: 65 cacgtttt-agtattagatacatccatatctagacaaatctaagacaagaatttt 118
|||||||| | ||||||||| |||| | |||||||| ||||||||||| ||||
Sbjct: 63 cacgttttgacatttagatacaaccatttttagacaaacctaagacaagattttt 117
Score = 77.8 bits (39), Expect = 3e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 76 attagatacatccatatctagacaaatctaagacaagaatttt 118
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 62 attagatacattcatatctagacaaatctaagacaagaatttt 20
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacgga 54
||||||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagatttatttagatacgga 54
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 83 acatccatatctagacaaatctaagacaagaattttgg 120
|||||| |||||||| ||||||||||||||||||||||
Sbjct: 54 acatccgtatctagataaatctaagacaagaattttgg 17
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 20 ccaaaattcttgtcttagatttttctaaatacggatgt 57
|||||||||||||||||||||| |||| ||||||||||
Sbjct: 17 ccaaaattcttgtcttagatttatctagatacggatgt 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 90 tatctagacaaatctaagacaagaattttggga-tgagggagtagt 134
|||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 58 tatctaaataaatctaagacaagaattttgggacggagggagtagt 103
>RF00906;MIR1122;DJ023121.1/176-54 4513:Hordeum vulgare
Length = 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttcta 46
||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 4 atactccctccgtcctaaaattcttgtcttagatttgtcta 44
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 88 catatctagacaaatctaagacaagaatttt 118
|||||||||||||||||||||||||||||||
Sbjct: 50 catatctagacaaatctaagacaagaatttt 20
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 77 ttagatacatccatatctagacaaatctaagacaagaattttg 119
|||||||||| ||| |||||| ||| |||| ||||||||||||
Sbjct: 63 ttagatacattcatttctagataaacctaatacaagaattttg 105
>RF00906;MIR1122;EU862588.1/607-710 4516:Hordeum bulbosum
Length = 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 70 tttagtattagatacatccatatctagacaaatctaagacaagaattttggga 122
|||||| |||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 37 tttagtgttagatacatccgtatctagataaatctaagacaagctttttggga 89
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 cctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
|||||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 95 cctccgtcccaaaaagcttgtcttagatttatctagatacggatgtatc 47
>RF00906;MIR1122;X73528.1/281-181 4565:Triticum aestivum (bread
wheat)
Length = 101
Score = 60.0 bits (30), Expect = 8e-09
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 90 tatctagacaaatctaagacaagaattttgggat-gagggagtagt 134
||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 54 tatctagacaaatctaagacaagaattttaagatggagggagtagt 99
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaattcttgtcttagattt 41
|||||||||| ||| ||||||||||||||||||||||
Sbjct: 3 aatactcccttcgttccaaaattcttgtcttagattt 39
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 90 tatctagacaaatctaagacaagaattttgg 120
|||| ||||||||||||||||||||||||||
Sbjct: 48 tatcaagacaaatctaagacaagaattttgg 18
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatac 51
|||||||||| || |||||||||||||||||||| |||| ||||
Sbjct: 97 tactccctccatcttaaaattcttgtcttagatttgtctagatac 53
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 60.0 bits (30), Expect = 8e-09
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatcaagtca 66
|||||||||||| | || | ||||||||| |||| |||| ||||||||||||| || |
Sbjct: 5 tactccctccgttctgaattacttgtcttaaatttgtctagatacggatgtatctagact 64
Query: 67 cgttttagtattagatacatccatatctagacaaatctaagacaag 112
| ||||||| |||| | ||| |||||||||||||| ||||||||
Sbjct: 65 cattttagtgctagacatatctgtatctagacaaatcgaagacaag 110
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 78 tagatacatccatatctagacaaatctaagacaag 112
||||||||||| ||||||||||||| |||||||||
Sbjct: 60 tagatacatccgtatctagacaaatttaagacaag 26
>RF00906;MIR1122;EU862571.1/695-592 98113:Hordeum murinum subsp.
glaucum
Length = 104
Score = 54.0 bits (27), Expect = 5e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
||||| ||||||||||| || ||||||| |||||| |||| |||||||||||||
Sbjct: 4 atactacctccgtcccagaaagcttgtctaagatttatctagatacggatgtatc 58
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 77 ttagatacatccatatctagacaaatctaagacaag 112
|||||||||||| |||||||| |||||| |||||||
Sbjct: 61 ttagatacatccgtatctagataaatcttagacaag 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtcttagattt 41
||||||||||||||||||| ||||| ||||||||
Sbjct: 100 tactccctccgtcccaaaaaacttgttttagattt 66
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaattcttgtcttaga 38
|||||||||||||||||||||| |||||| ||||
Sbjct: 3 aatactccctccgtcccaaaatacttgtcgtaga 36
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaattcttgtcttaga 38
||||||||||||||||||||| |||||| ||||
Sbjct: 122 atactccctccgtcccaaaatacttgtcgtaga 90
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 34 ataatactccctccgtcccaaaat 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 88 ataatactccctccgtcccaaaat 65
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaat 24
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaat 24
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 112 ataatactccctccgtcccaaaat 89
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 130 taatactccctccgtcccaaaat 108
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 148 taatactccctccgtcccaaaat 126
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 124 taatactccctccgtcccaaaat 102
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 115 taatactccctccgtcccaaaat 93
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 130 taatactccctccgtcccaaaat 108
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 166 taatactccctccgtcccaaaat 144
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 78 taatactccctccgtcccaaaat 56
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 112 taatactccctccgtcccaaaat 90
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaat 26
|||||||||||||||||||||||
Sbjct: 2 taatactccctccgtcccaaaat 24
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 135 aatactccctccgtcccaaaat 114
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 102 aatactccctccgtcccaaaat 81
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AY465427.2/1983-1848 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 136
Score = 44.1 bits (22), Expect = 5e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaattcttgtcttagatttttctaaatacggatgtatc 60
|||||||||||| ||||||| ||| ||| |||| |||||| |||||||||||
Sbjct: 5 tactccctccgttccaaaatagttgacttgaatttgtctaaacacggatgtatc 58
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 103 aatactccctccgtcccaaaat 82
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaattcttgtctta 36
|||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataattgtctta 72
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 103 aatactccctccgtcccaaaat 82
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaattcttgtcttagattt 41
||||||||||| ||||||||||| ||||||| |||||
Sbjct: 2 taatactccctacgtcccaaaataattgtctttgattt 39
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
Indica Group
Length = 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 160 aatactccctccgtcccaaaat 139
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 110 aatactccctccgtcccaaaat 89
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 94 aatactccctccgtcccaaaat 73
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
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Sbjct: 155 aatactccctccgtcccaaaat 134
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 127 aatactccctccgtcccaaaat 106
>RF00906;MIR1122;AACV01018660.1/8916-9023 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 97 aatactccctccgtcccaaaat 76
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
