miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 55 ttaaaaactgtcttacattttgggactgagggagtact 92
||||||| ||||||||||| |||||| |||||||||||
Sbjct: 55 ttaaaaaatgtcttacattatgggacggagggagtact 92
>RF00906;MIR1122;FJ436986.1/65183-65072 37682:Aegilops tauschii
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 57 aaaaactgtcttacattttgggactgagggagta 90
||||| |||||||||||||| ||| |||||||||
Sbjct: 38 aaaaaatgtcttacattttgagacagagggagta 5
>RF00906;MIR1122;AP008207.1/29270032-29270129 39947:Oryza sativa
Japonica Group
Length = 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 agtactctctctgtcccaaaat 42
||||||||||||||||||||||
Sbjct: 3 agtactctctctgtcccaaaat 24
