miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 attttggaacggagggagtatat 92
|||||||||||||||||||||||
Sbjct: 99 attttggaacggagggagtatat 121
>RF00906;MIR1122;ABXC01000529.1/263619-263734 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 71 ttttggaacggagggagtatat 92
||||||||||||||||||||||
Sbjct: 23 ttttggaacggagggagtatat 2
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 attttggaacggagggagtata 91
||||||||||||||||||||||
Sbjct: 45 attttggaacggagggagtata 66
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 70 attttggaacggagggagtata 91
||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtata 3
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 attttggaacggagggagtata 91
||||||||||||||||||||||
Sbjct: 144 attttggaacggagggagtata 165
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 70 attttggaacggagggagtata 91
||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtata 3
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 70 attttggaacggagggagtata 91
||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtata 3
