miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU730895.1/43836-43713 15368:Brachypodium
distachyon
Length = 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 59 tggatgtatctatacactaaatagcatctagatacat 95
||||||||||||||| ||||| |||||||||||||||
Sbjct: 48 tggatgtatctatac-ctaaaaagcatctagatacat 83
>RF00906;MIR1122;EU730897.1/94709-94844 15368:Brachypodium
distachyon
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 64 gtatctatacactaaatagcatctagatacatctaaattttg 105
||||||||||||||| | |||||||||||||||||||||
Sbjct: 83 gtatctatacactaagtcatgtctagatacatctaaattttg 42
>RF00906;MIR1122;AC084282.6/14827-14672 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 atatactccctccgtcccatga 34
||||||||||||||||||||||
Sbjct: 155 atatactccctccgtcccatga 134
