miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY491681.1/88752-88866 4568:Triticum monococcum
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatccgtatc 92
|||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 74 atgtatctagatgtattttagttctagatacatccatatc 35
>RF00906;MIR1122;EF540321.1/236564-236678 4571:Triticum turgidum
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 41 gatgtatctagatgtattttagttatagatacatcc 76
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 77 tagatacatccgtatctagaaaaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| ||| || ||||| || || |||||||||||||||
Sbjct: 60 tagatacatccgtatctagacaaatttaagacaagtaattcagaacggagggagta 5
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 40 gatgtatctagatgtattttagttctagatacatcc 75
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 41 gatgtatctagatgtattttagttctagatacatcc 76
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 85 gatgtatctagatgtattttagttctagatacatcc 50
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 105 agacacttattttagaacggagggagtagcat 136
||||||||||||| ||||||||||||||||||
Sbjct: 32 agacacttattttggaacggagggagtagcat 1
>RF00906;MIR1122;L41869.1/3010-3134 4513:Hordeum vulgare
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 41 gatgtatctagatgtattttagttatagatacatcc 76
>RF00906;MIR1122;EU282650.1/1397-1273 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 41 gatgtatctagatgtattttagttctagatacatcc 76
>RF00906;MIR1122;AY013754.1/1932-2046 37682:Aegilops tauschii
Length = 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||||||||
Sbjct: 75 gatgtatctagatgtattttagttctagatacatcc 40
>RF00906;MIR1122;BT009606.1/1324-1200 4565:Triticum aestivum
(bread wheat)
Length = 125
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatcc 87
|||||||||||| ||||||| ||||||||||||||
Sbjct: 84 atgtatctagatgtattttaattgtagatacatcc 50
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 102 ttgagacacttattttagaacggagggagta 132
|||||||||||||||||||||||| ||||||
Sbjct: 35 ttgagacacttattttagaacggaaggagta 5
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 102 ttgagacacttattttagaacggagggagta 132
|||||||||||||||| ||||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| | ||||||||||||
Sbjct: 67 aaagttgagacacttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 102 ttgagacacttattttagaacggagggagta 132
|||||||||||||||| | ||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;CT009625.1/8885-8999 37682:Aegilops tauschii
Length = 115
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatcc 87
|||||||||||| |||||||||| |||||||||||
Sbjct: 74 atgtatctagatgtattttagttatagatacatcc 40
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 103 tgagacacttattttagaacggagggagta 132
||||||||||||||| ||||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagta 130
>RF00906;MIR1122;DQ145552.1/668-803 4573:Aegilops speltoides
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacat 85
||||||||||||| |||||||||| |||||||||
Sbjct: 85 gatgtatctagatgtattttagttctagatacat 52
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 98 aaagttgagacacttattttagaacggagggag 130
|||||||||||||||||||| | ||||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 98 aaagttgagacacttattttagaacggagggag 130
|||||||||||||||||||| | ||||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagggag 7
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 99 aagttgagacacttattttagaacggagggagta 132
||||||||||||||||||| | ||||||| ||||
Sbjct: 56 aagttgagacacttattttgggacggaggaagta 89
>RF00906;MIR1122;AB298185.1/18759-18893 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagataca 84
||||||||||||| |||||||||| ||||||||
Sbjct: 85 gatgtatctagatgtattttagttctagataca 53
>RF00906;MIR1122;FJ225151.1/115-1 4565:Triticum aestivum (bread
wheat)
Length = 115
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacat 85
|||||||||||| |||||||||| |||||||||
Sbjct: 79 atgtatctagatgtattttagttctagatacat 47
>RF00906;MIR1122;EU812563.1/59152-59276 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacat 85
|||||||||||| |||||||||| |||||||||
Sbjct: 84 atgtatctagatatattttagttctagatacat 52
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 101 gttgagacacttattttagaacggagggagta 132
||||||||||||||||| | ||||||||||||
Sbjct: 70 gttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;BT009295.1/1923-1809 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
|||||||| |||| |||||||||| |||||||||||
Sbjct: 75 gatgtatcaagatgtattttagttctagatacatcc 40
>RF00906;MIR1122;AY146587.2/110938-111052 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
|||||||||||| |||||||||| |||||||||||
Sbjct: 75 gatgtatctagacatattttagttctagatacatcc 40
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 101 gttgagacacttattttagaacggagggagta 132
||||||||||||||||| | ||||||||||||
Sbjct: 36 gttgagacacttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 103 tgagacacttattttagaacggagggagta 132
||||||||||||||| | ||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;EU117148.1/1866-1980 4571:Triticum turgidum
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||| ||||
Sbjct: 41 gatgtatctagatgtattttagttttagatatatcc 76
>RF00906;MIR1122;AB238931.1/2749-2883 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| || ||||||||
Sbjct: 85 gatgtatctagatgtattttagttctaaatacatcc 50
>RF00906;MIR1122;AY951945.1/36609-36485 4568:Triticum monococcum
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 54 tgtatctagatctattttagttgtagatacat 85
||||||||||| |||||||||| |||||||||
Sbjct: 43 tgtatctagatgtattttagttctagatacat 74
>RF00906;MIR1122;AF474373.1/52258-52134 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| |||||||||| |||||| ||||
Sbjct: 41 gatgtatctagatgtattttagttctagatatatcc 76
>RF00906;MIR1122;EU282564.1/350-463 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
||||||||||||| ||||| |||| |||||||||||
Sbjct: 41 gatgtatctagatgtatttcagttctagatacatcc 76
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 105 agacacttattttagaacggagggagta 132
||||||||||||| ||||||||||||||
Sbjct: 32 agacacttattttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||| ||||||| | ||||||||||||
Sbjct: 67 aaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagtag 133
|||||||||||| ||||||| ||||||||||||||
Sbjct: 67 aaagttgagacatttattttgaaacggagggagtag 102
>RF00906;MIR1122;AF459085.1/1867-1743 4513:Hordeum vulgare
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
|||||||||||| |||||||||| |||||||||||
Sbjct: 85 gatgtatctagacgtattttagttctagatacatcc 50
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagtag 133
|||||||||||| ||||||| | |||||||||||||
Sbjct: 67 aaagttgagacatttattttgggacggagggagtag 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 102 ttgagacacttattttagaacggagggagta 132
|||||||||||||||| | ||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagtag 133
|||||||||||| ||||||| | |||||||||||||
Sbjct: 67 aaagttgagacatttattttgggacggagggagtag 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 102 ttgagacacttattttagaacggagggagta 132
|||||||||||||||| | ||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagtag 133
||||||||| || ||||||||||||||||||||||
Sbjct: 67 aaagttgagtcatctattttagaacggagggagtag 102
>RF00906;MIR1122;AF548379.1/5968-6092 37682:Aegilops tauschii
Length = 125
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatcc 87
|||||||||||| |||||||||| |||||||||||
Sbjct: 41 gatgtatctagacgtattttagttctagatacatcc 76
>RF00906;MIR1122;X13580.1/135-24 4565:Triticum aestivum (bread
wheat)
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 agatgtatctagatctattttagttgtagatacat 85
|||||||||||| | |||||||||| |||||||||
Sbjct: 40 agatgtatctagttgtattttagttctagatacat 74
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| | | ||||||||||
Sbjct: 67 aaagttgagacacttattttgggatggagggagta 101
>RF00906;MIR1122;DQ904440.1/75385-75530 52163:Triticum monococcum
subsp. aegilopoides
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatc 86
||||||||||||| |||||||||| || |||||||
Sbjct: 62 gatgtatctagatgtattttagttctacatacatc 96
>RF00906;MIR1122;AY963808.1/10854-10720 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 gatgtatctagatctattttagttgtagatacatc 86
|||||||||||| |||||||||| ||||||||||
Sbjct: 51 gatgtatctagacatattttagttctagatacatc 85
>RF00906;MIR1122;AM932686.1/4713-4599 4565:Triticum aestivum
(bread wheat)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 52 gatgtatctagatctattttagttgtagatacatc 86
|||||||||||| |||||||||| ||||||||||
Sbjct: 75 gatgtatctagacgtattttagttctagatacatc 41
>RF00906;MIR1122;EU096089.1/6299-6422 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatcc 87
||||||||||| |||||||||| |||||||||||
Sbjct: 83 atgtatctagacttattttagttatagatacatcc 49
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 106 gacacttattttagaacggagggagta 132
|||||||||||||| ||||||||||||
Sbjct: 76 gacacttattttaggacggagggagta 102
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
||||||||| |||||||||| | ||||||||||||
Sbjct: 66 aaagttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| | ||||| ||||||
Sbjct: 39 aaagttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||| ||||||| | ||||||||||||
Sbjct: 67 aaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| ||| |||||||||
Sbjct: 67 aaagttgagacacttattttggaagagagggagta 101
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||| ||||||| | ||||||||||||
Sbjct: 67 aaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||||||||||||||||| | | ||||||||||
Sbjct: 74 aaagttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;AF532104.1/14817-14951 37682:Aegilops tauschii
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 51 agatgtatctagatctattttagttgtagatacat 85
|||||||||||||| ||||||| || |||||||||
Sbjct: 86 agatgtatctagatgtattttaattctagatacat 52
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
||||||||| |||||||||| | ||||||||||||
Sbjct: 39 aaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 98 aaagttgagacacttattttagaacggagggagta 132
|||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aaagttaagacacttattttgggacggagggagta 101
>RF00906;MIR1122;AY951945.1/37511-37377 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatc 86
|||||||||||| |||||||||| ||| ||||||
Sbjct: 84 atgtatctagatatattttagttctaggtacatc 51
>RF00906;MIR1122;AY643843.1/31186-31309 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 124
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 53 atgtatctagatctattttagttgtagatacatc 86
||||||||||| |||||||||| ||||||||||
Sbjct: 83 atgtatctagacttattttagttatagatacatc 50
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 104 gagacacttattttagaacggagggagtag 133
|||||||||||||| | |||||||||||||
Sbjct: 33 gagacacttattttgggacggagggagtag 4
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 tattttagaacggagggagtag 133
||||||||||||||||||||||
Sbjct: 25 tattttagaacggagggagtag 4
>RF00906;MIR1122;AACV01007827.1/8284-8145 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 111 ttattttagaacggagggagta 132
||||||||||||||||||||||
Sbjct: 26 ttattttagaacggagggagta 5
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 108 cacttattttagaacggagggagtag 133
|||||||||| |||||||||||||||
Sbjct: 61 cacttattttggaacggagggagtag 86
>RF00906;MIR1122;AAAA02006989.1/4212-4341 39946:Oryza sativa Indica
Group
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 tattttagaacggagggagtag 133
||||||||||||||||||||||
Sbjct: 25 tattttagaacggagggagtag 4
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 tattttagaacggagggagtag 133
||||||||||||||||||||||
Sbjct: 25 tattttagaacggagggagtag 4
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tattttagaacggagggagtag 133
||||||||||||||||||||||
Sbjct: 76 tattttagaacggagggagtag 97
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 tattttagaacggagggagtag 133
||||||||||||||||||||||
Sbjct: 25 tattttagaacggagggagtag 4
