miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU730895.1/46100-45965 15368:Brachypodium
distachyon
Length = 136
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 267 tactccctccgtgcaacaaaagatgtctca 296
|||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccaacaaaagatgtctca 34
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 266 atactccctccgtgcaacaaaagatgtctca 296
||||||||||||| ||||||| |||||||||
Sbjct: 133 atactccctccgtccaacaaaggatgtctca 103
>RF00906;MIR1122;EU730900.1/33277-33412 15368:Brachypodium
distachyon
Length = 136
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 267 tactccctccgtgcaacaaaagatgtctca 296
|||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccaacaaaagatgtctca 34
>RF00906;MIR1122;EU730898.1/64006-63871 15368:Brachypodium
distachyon
Length = 136
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 267 tactccctccgtgcaacaaaagatgtctca 296
|||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtccaacaaaagatgtctca 34
>RF00906;MIR1122;EU730897.1/94709-94844 15368:Brachypodium
distachyon
Length = 136
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 267 tactccctccgtgcaacaaaagatgtctca 296
|||||||||||| |||||||||||||||||
Sbjct: 132 tactccctccgtccaacaaaagatgtctca 103
>RF00906;MIR1122;EU730894.1/75460-75595 15368:Brachypodium
distachyon
Length = 136
Score = 46.1 bits (23), Expect = 3e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 266 atactccctccgtgcaacaaaagatgtctca 296
||||||||| ||| |||||||||||||||||
Sbjct: 4 atactcccttcgtccaacaaaagatgtctca 34
