miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00015;U4;AABR04001466.1/25624-25464 10116:Rattus norvegicus
(Norway rat)
Length = 161
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 118 gctggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 81 gctggagagatggctcagtggttaagagcactgactgctcttccaaaggtcc 132
>RF00100;7SK;AC160411.8/123410-123103 10090:Mus musculus (house
mouse)
Length = 308
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 118 gctggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 252 gctggagagatggctcagtggttaagaacactgactgctcttccaaaggtcc 303
>RF00005;tRNA;CAAA01157167.1/12447-12514 :
Length = 68
Score = 83.8 bits (42), Expect = 7e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tggctcagtggttaagagcactgactgctcttccagaggtcc 44
>RF00005;tRNA;CU424437.12/31929-31863 :
Length = 67
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagagg 166
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ggagagatggcttagtggttaagagcactgactgctcttccagagg 46
>RF00005;tRNA;AAHX01077052.1/11963-12029 :
Length = 67
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1 ggagagatggctcagcgattaagagcactgactgctcttccagaggtcc 49
>RF00005;tRNA;AAHX01040457.1/18418-18351 :
Length = 68
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 127 atggctcagtggttaagagcactgactgctcttccagaggt 167
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggctcagtggttaagagcactgactgctcttccagaggt 44
>RF00005;tRNA;AAHX01051651.1/13700-13764 :
Length = 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gatggctcagtggttaagagcactgactgcttttccagaggtcc 44
>RF00005;tRNA;AAHX01071409.1/49491-49423 :
Length = 69
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagagg 166
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggctcagtggttaagagcactgactgctcttccagagg 42
>RF00005;tRNA;AC154566.2/36961-37027 :
Length = 67
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 123 agagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 3 agagatggctcagcggttaagagcactggctgctcttccagaggtcc 49
>RF00005;tRNA;AAHX01072941.1/6810-6743 :
Length = 68
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 1 agatggctcagtggttaagagcattgactgttcttccagaggtcc 45
>RF00005;tRNA;AAHX01020796.1/12734-12668 :
Length = 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 agatggctcagtggttaagagcactggctactcttccagaggtcc 45
>RF00005;tRNA;AAHX01461018.1/251-185 :
Length = 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||||||||||||||| |||||| ||||| |||||||||
Sbjct: 1 ggagagatggctcagtggttaagagcgctgacttctctttcagaggtcc 49
>RF00005;tRNA;AAHX01020593.1/30733-30667 :
Length = 67
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagagg 166
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatgactcagtggttaagagcactgactgctcttccagagg 42
>RF00005;tRNA;AABR04001160.1/34663-34728 :
Length = 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 123 agagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 3 agagatggctcagtggtta-gagcactgactgcgcttccagaggtcc 48
>RF00005;tRNA;AABR04057490.1/5367-5433 :
Length = 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagagg 166
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 4 tggctcagtgattaagagcactgactgctcttccagagg 42
>RF00005;tRNA;AAHX01066260.1/1828-1900 :
Length = 73
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 8 tggctcacttgttaagagcactgactgctcttccagaggtcc 49
>RF00005;tRNA;AAHX01050080.1/11400-11334 :
Length = 67
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagagg 166
|||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 1 agatggctcagtagttaagagcactgacttctcttccagagg 42
>RF00005;tRNA;AAHX01092426.1/27349-27280 :
Length = 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 124 gagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct: 1 gagatggctcagtggtaaagagcactgattgcttttccagaggtcc 46
>RF00005;tRNA;AABR04065012.1/6558-6493 :
Length = 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 127 atggctcagtggttaagagcactgactgctcttccagaggtc 168
||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 1 atggctcagcggttaagagcactgactgttcttccagaggtc 42
>RF00005;tRNA;AAHX01082141.1/280-344 :
Length = 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggt 167
|||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1 gatggctcagaggtttagagcactgactgctcttccagaggt 42
>RF00005;tRNA;AAHX01065836.1/37524-37594 :
Length = 71
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagag 165
|||||| | |||||||||||||||||||||||| |||||||||||
Sbjct: 1 ggagagtttgctcagtggttaagagcactgactcctcttccagag 45
>RF00005;tRNA;AABR04006582.1/17507-17438 :
Length = 70
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||| ||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 1 ggagcgatggctcagtggttaagagcactggttgctcttgcagaggtcc 49
>RF00005;tRNA;AAHX01060451.1/27100-27034 :
Length = 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||| ||||||||||||||| |||||||||||| |||||||
Sbjct: 1 agatggcttagtggttaagagcacagactgctcttcctgaggtcc 45
>RF00005;tRNA;CU468273.1/88736-88670 :
Length = 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 1 agatggcttagtggttaagagtactgactgcccttccagaggtcc 45
>RF00005;tRNA;CAAA01123304.1/6479-6413 :
Length = 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||| |||||| |||||||||||||| |||||||||||||||||
Sbjct: 1 ggagagatagctcagaggttaagagcactggatgctcttccagaggtcc 49
>RF00005;tRNA;AABR04183477.1/149-216 :
Length = 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagag 165
||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gatggctcaaaggttaagagcactgactgctcttccagag 40
>RF00005;tRNA;AAHX01018568.1/4575-4641 :
Length = 67
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 123 agagatggctcagtggttaagagcactgactgctcttccagagg 166
||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 3 agagatggctcagtgtttaagagcattggctgctcttccagagg 46
>RF00005;tRNA;AABR04096067.1/1552-1485 :
Length = 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 1 gatggctcagcggttaagagcactgactactcctccagaggtcc 44
>RF00005;tRNA;AABR04010613.1/44090-44153 :
Length = 64
Score = 63.9 bits (32), Expect = 7e-10
Identities = 42/44 (95%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 127 atggctcagtggttaagagcactg-actgctcttccagaggtcc 169
|||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1 atggctcagtggttaagagcactgtactgctctaccagaggtcc 44
>RF00005;tRNA;AABR04062805.1/12294-12230 :
Length = 65
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1 gatggttcagtggttaagaacactggctgctcttccagaggtcc 44
>RF00005;tRNA;AAHY01107243.1/6262-6192 :
Length = 71
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgct 156
|||||||||||||||||||||||||||||| |||||
Sbjct: 1 ggagagatggctcagtggttaagagcactggctgct 36
>RF00005;tRNA;AAHX01072537.1/1332-1402 :
Length = 71
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagagg 166
|||||||| |||||| |||||||||||||||||||||||
Sbjct: 8 tggctcagcggttaatagcactgactgctcttccagagg 46
>RF00005;tRNA;AAHX01000534.1/20089-20159 :
Length = 71
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggt 167
|||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 1 ggagagatagctcagtggttaagagccctgggtgctcttccagaggt 47
>RF00005;tRNA;AABR04022455.1/27193-27126 :
Length = 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 124 gagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||||||| ||||||||||||||| ||||| |||||
Sbjct: 1 gagatggctcagtggtta-gagcactgactgctcgtccaggggtcc 45
>RF00005;tRNA;AAHY01047864.1/7110-7179 :
Length = 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgc 155
||||||||||||||||||||||||||||||
Sbjct: 6 gatggctcagtggttaagagcactgactgc 35
>RF00005;tRNA;AAHX01083707.1/3286-3216 :
Length = 71
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagag 165
|||| ||||||||||||||||||||||||||| || |||||
Sbjct: 5 agatagctcagtggttaagagcactgactgcttttgcagag 45
>RF00005;tRNA;AABR04003731.1/2218-2146 :
Length = 73
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||||||| ||||||||||||| ||||| ||| ||||||||
Sbjct: 1 ggagagatggctcagcagttaagagcactggctgcttttctagaggtcc 49
>RF00005;tRNA;AC107098.6/23604-23671 :
Length = 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||| ||||||| ||||||||||||| | ||||||||||||
Sbjct: 1 gatggcttagtggttcagagcactgactgtttttccagaggtcc 44
>RF00005;tRNA;AC156274.8/156513-156578 :
Length = 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttc 160
|||||||| |||||||||||| ||||||||||||||||||
Sbjct: 1 ggagagatagctcagtggtta-gagcactgactgctcttc 39
>RF00100;7SK;CAAA01021056.1/19018-18771 10090:Mus musculus (house
mouse)
Length = 248
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 118 gctggagagatggctcagtggttaagagcactgactgctcttcc 161
||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 205 gctggtgagatggctcagcaggtaagagcactgactgctcttcc 248
>RF00005;tRNA;AABR04050065.1/4525-4597 :
Length = 73
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 136 tggttaagagcactgactgctcttccagagg 166
||||||||||||||| |||||||||||||||
Sbjct: 16 tggttaagagcactggctgctcttccagagg 46
>RF00005;tRNA;AAHX01091105.1/26950-27024 :
Length = 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttcca 162
|||||||| |||||||||||||||||||||||||
Sbjct: 10 tggctcagcagttaagagcactgactgctcttcca 44
>RF00005;tRNA;CAAA01161095.1/30959-30884 :
Length = 76
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 120 tggagagatggctcagtggttaagagcactgactgctcttccagagg 166
||||| ||| |||||||||| | |||||||| |||||||||||||||
Sbjct: 3 tggagtgatagctcagtggtcaggagcactggctgctcttccagagg 49
>RF00005;tRNA;AABR04129097.1/3038-2974 :
Length = 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||| |||||||| || |||||||||| ||||
Sbjct: 3 tggctcagtggttaggagcactggcttctcttccagaagtcc 44
>RF00005;tRNA;AAHX01041629.1/25633-25698 :
Length = 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 124 gagatggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||| |||||||||||||| |||| ||| ||||||||
Sbjct: 1 gagatggctcagcagttaagagcactgagtgcttttcaagaggtcc 46
>RF00005;tRNA;AC123644.8/131622-131556 :
Length = 67
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactg 150
||||||||||||||||||||||||||
Sbjct: 1 agatggctcagtggttaagagcactg 26
>RF00005;tRNA;AC160051.2/110174-110104 :
Length = 71
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagagg 166
|||||||| ||||||||||||||||| ||| ||||| |||||
Sbjct: 3 agatggcttagtggttaagagcactggctgttcttctagagg 44
>RF00005;tRNA;AAHX01071249.1/12167-12094 :
Length = 74
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcact 149
|||| ||||||||||||||||||||||||
Sbjct: 1 ggagggatggctcagtggttaagagcact 29
>RF00005;tRNA;AABR04027838.1/3056-3128 :
Length = 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 138 gttaagagcactgactgctcttccagagg 166
||||||||||||| |||||||||||||||
Sbjct: 18 gttaagagcactggctgctcttccagagg 46
>RF00005;tRNA;AABR04139188.1/2146-2043 :
Length = 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 141 aagagcactgactgctcttccagaggtcc 169
|||||||||||| ||||||||||||||||
Sbjct: 52 aagagcactgacagctcttccagaggtcc 80
>RF00005;tRNA;AAHX01336191.1/758-657 :
Length = 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 141 aagagcactgactgctcttccagaggtcc 169
|||||||||||| ||||||||||||||||
Sbjct: 50 aagagcactgacagctcttccagaggtcc 78
>RF00005;tRNA;AC167565.1/86156-86227 :
Length = 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 122 gagagatggctcagtggttaagagcactg 150
||||||||||||| |||||||||||||||
Sbjct: 1 gagagatggctcaatggttaagagcactg 29
>RF00005;tRNA;AAHY01012534.1/7486-7416 :
Length = 71
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 121 ggagagatggctcagtggttaagagcactgactgctcttccagaggtc 168
||||||| ||||||||||||||| ||||| || |||||||||||||
Sbjct: 1 ggagagacagctcagtggttaagaacactggatgatcttccagaggtc 48
>RF00005;tRNA;AC098570.7/112246-112313 :
Length = 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 126 gatggctcagtggttaagagcactgactgctcttccagaggtcc 169
||||||||||| |||||| |||||| ||||| ||| ||||||||
Sbjct: 1 gatggctcagtagttaagggcactggctgcttttcgagaggtcc 44
>RF00005;tRNA;AABR04000916.1/30716-30786 :
Length = 71
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 123 agagatggctcagtggttaagagcact 149
|||||||||| ||||||||||||||||
Sbjct: 1 agagatggcttagtggttaagagcact 27
>RF00005;tRNA;AAHY01115322.1/22235-22303 :
Length = 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 124 gagatggctcagtggttaagagcactgactg 154
||||||||| ||||||| |||||||||||||
Sbjct: 3 gagatggcttagtggttgagagcactgactg 33
>RF00005;tRNA;AC164303.2/12456-12522 :
Length = 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagagg 166
|||||||||||| |||||||| |||||||||| |||||
Sbjct: 4 tggctcagtggtcaagagcaccaactgctcttctagagg 42
>RF00005;tRNA;AC111033.11/26664-26733 :
Length = 70
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 124 gagatggctcagtggttaagagcactg 150
||||||||||||||||||||| |||||
Sbjct: 4 gagatggctcagtggttaagaacactg 30
>RF00005;tRNA;AC094784.13/2484-2551 :
Length = 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactg 150
||||||||||| ||||||||||||||
Sbjct: 5 agatggctcagcggttaagagcactg 30
>RF00005;tRNA;AAHX01065387.1/15568-15637 :
Length = 70
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 125 agatggctcagtggttaagagcactgactgctcttccagagg 166
|||| |||||||||| | |||||||| ||| |||||||||||
Sbjct: 6 agatagctcagtggtcaggagcactggctgatcttccagagg 47
>RF00005;tRNA;AAHX01018532.1/1996-2068 :
Length = 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 128 tggctcagtggttaagagcactgactgctcttccagaggtcc 169
|||||||||||||||| |||| |||| ||||| ||||||||
Sbjct: 8 tggctcagtggttaagggcaccaactgttcttctagaggtcc 49
>RF00005;tRNA;AAHY01098092.1/717-789 :
Length = 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 127 atggctcagtggttaagagcactgactgctcttc 160
||||||||| || ||||||||||| |||||||||
Sbjct: 7 atggctcagaggctaagagcactggctgctcttc 40
>RF00005;tRNA;AC166074.3/78354-78296 :
Length = 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ggttaagagcactgactgctcttccagagg 166
|||||| ||||||||||||| |||||||||
Sbjct: 9 ggttaaaagcactgactgctattccagagg 38
>RF00100;7SK;AABR04045625.1/13448-13703 10116:Rattus norvegicus
(Norway rat)
Length = 256
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 129 ggctcagtggttaagagcactgactgctcttcca 162
||||||| |||||| |||||||||||||| ||||
Sbjct: 163 ggctcagcggttaaaagcactgactgctcgtcca 196
>RF00100;7SK;AC093346.7/95903-96190 10090:Mus musculus (house mouse)
Length = 288
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 118 gctggagagatggctcagtggttaag 143
|||| |||||||||||||||||||||
Sbjct: 225 gctgaagagatggctcagtggttaag 250
