miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00100;7SK;AAKN02013209.1/15290-15606 10141:Cavia porcellus
(domestic guinea pig)
Length = 317
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 55 catgcctttaatcccagcacttgggaagc 83
||||||| |||||||||||||||||||||
Sbjct: 281 catgcctgtaatcccagcacttgggaagc 309
>RF00017;Metazoa_SRP;ABGA01255151.1/8211-7930 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 catgcctttaatcccagcacttggga 80
||||||| ||||||||||||||||||
Sbjct: 17 catgcctgtaatcccagcacttggga 42
>RF00017;Metazoa_SRP;ABGA01288150.1/746-1024 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 catgcctttaatcccagcactt 76
||||||||||||||||||||||
Sbjct: 242 catgcctttaatcccagcactt 263
>RF00017;Metazoa_SRP;AACZ02147783.1/20859-20578 9598:Pan
troglodytes (chimpanzee)
Length = 282
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 catgcctttaatcccagcactt 76
||||||||||||||||||||||
Sbjct: 17 catgcctttaatcccagcactt 38
>RF00017;Metazoa_SRP;CABD01052359.1/621-902 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 catgcctttaatcccagcactt 76
||||||||||||||||||||||
Sbjct: 17 catgcctttaatcccagcactt 38
