miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00749;mir-208;ABRQ01358819.1/2881-2802 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 129 bits (65), Expect = 7e-30
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 11 tctcctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaaca 70
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1 tctcctctcagggaagctttttgctcgcgttatgtttcttatttgaatataagacgaaca 60
Query: 71 aaaggtttgtctgaggg 87
|||||||||||||||||
Sbjct: 61 aaaggtttgtctgaggg 77
>RF00749;mir-208;AAKN02019132.1/109134-109213 10141:Cavia
porcellus (domestic guinea pig)
Length = 80
Score = 119 bits (60), Expect = 7e-27
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 12 ctcctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaa 71
||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 2 ctcctctcaggaaagctttttgctcgaattatgtttctcatccaaatataagacgaacaa 61
Query: 72 aaggtttgtctgaggg 87
||||||||||||||||
Sbjct: 62 aaggtttgtctgaggg 77
>RF00749;mir-208;ABRT010337019.1/103-26 9478:Tarsius syrichta
(Philippine tarsier)
Length = 78
Score = 97.6 bits (49), Expect = 3e-20
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 11 tctcctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaaca 70
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct: 1 tctcctctcagggaagctttttgctcgaattatgtttctcattcgaatataagacgacca 60
Query: 71 aaaggtttgtctgagg 86
|| ||||||||||||
Sbjct: 61 aa--gtttgtctgagg 74
