miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01043;MIR1023;ABEU01004783.1/104781-104949 145481:Physcomitrella
           patens subsp. patens
          Length = 169

 Score =  143 bits (72), Expect = 7e-34
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                       
Query: 61  ggagcgattggaccaccttgcagtttcatggcacactctctccatttctctaccgttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggagcgattggaccaccttgcagtttcatggcacactctctccatttctctaccgttcat 60

                       
Query: 121 gcagcggttgat 132
           ||||||||||||
Sbjct: 61  gcagcggttgat 72




>RF01043;MIR1023;ABEU01011925.1/25350-25179 145481:Physcomitrella
           patens subsp. patens
          Length = 172

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 77  cttgcagtttcatggcacactctctccatttctct 111
           |||||| ||||||| ||||||||||||||||||||
Sbjct: 18  cttgcaatttcatgacacactctctccatttctct 52