miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00638;MIR159;ABEU01002787.1/15883-15704 145481:Physcomitrella
           patens subsp. patens
          Length = 180

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 164 tctcttggactgaagggagctcc 186
           |||||||||||||||||||||||
Sbjct: 145 tctcttggactgaagggagctcc 167




>RF00638;MIR159;ABEU01011353.1/55901-55718 145481:Physcomitrella
           patens subsp. patens
          Length = 184

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 164 tctcttggactgaagggagctcc 186
           |||||||||||||||||||||||
Sbjct: 149 tctcttggactgaagggagctcc 171




>RF00638;MIR159;ABEU01012145.1/27473-27654 145481:Physcomitrella
           patens subsp. patens
          Length = 182

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 164 tctcttggactgaagggagctcc 186
           |||||||||||||||||||||||
Sbjct: 147 tctcttggactgaagggagctcc 169




>RF00638;MIR159;ABEU01006795.1/68509-68689 145481:Physcomitrella
           patens subsp. patens
          Length = 181

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 165 ctcttggactgaagggagctcc 186
           ||||||||||||||||||||||
Sbjct: 147 ctcttggactgaagggagctcc 168