miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01927;MIR1222;ABEU01010965.1/39082-39214 145481:Physcomitrella
patens subsp. patens
Length = 133
Score = 210 bits (106), Expect = 3e-54
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 ctggttgttgtgggcattcttgtgctagtaaactccttcatgcagaagtgcgcttctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ctggttgttgtgggcattcttgtgctagtaaactccttcatgcagaagtgcgcttctagc 71
Query: 61 acctgcttgaaggagttcattggtatataaatgcccacaacatgat 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 acctgcttgaaggagttcattggtatataaatgcccacaacatgat 117
>RF01927;MIR1222;ABEU01005809.1/86770-86904 145481:Physcomitrella
patens subsp. patens
Length = 135
Score = 56.0 bits (28), Expect = 9e-08
Identities = 72/86 (83%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 12 gggcattcttgtgctagtaaactccttcatgcagaagtgcg---cttctagcacctgctt 68
|||||||| |||||| || |||||||||||||| ||||||| |||| ||||| ||||
Sbjct: 25 gggcattcgtgtgctggtgaactccttcatgcacaagtgcggctcttcgcgcaccagctt 84
Query: 69 gaaggagttcattggtatataaatgc 94
|||| ||||| |||||||| |||||
Sbjct: 85 taaggggttcactggtatatgaatgc 110
