miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00005;tRNA;BAAB01082498.1/261-167 :
Length = 95
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgccaagggaa 29
|||||||||||||||||||||||||||||
Sbjct: 67 ggtcgcgggttcgaatcccgccaagggaa 95
>RF00005;tRNA;BAAB01158417.1/1800-1867 :
Length = 68
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgccaag 25
|||||||||||||||||||||||||
Sbjct: 40 ggtcgcgggttcgaatcccgccaag 64
>RF00005;tRNA;ABSR01019593.1/248-175 :
Length = 74
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 gtcgcgggttcgaatcccgccaa 24
|||||||||||||||||||||||
Sbjct: 47 gtcgcgggttcgaatcccgccaa 69
>RF00005;tRNA;AACY020058601.1/122-49 :
Length = 74
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcca 23
|||||||||||||||||||||||
Sbjct: 46 ggtcgcgggttcgaatcccgcca 68
>RF00005;tRNA;AAFX01126065.1/321-393 :
Length = 73
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcca 23
|||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcca 67
>RF00005;tRNA;AP009389.1/2709062-2708991 :
Length = 72
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcca 23
|||||||||||||||||||||||
Sbjct: 44 ggtcgcgggttcgaatcccgcca 66
>RF00005;tRNA;AASC02030884.1/39791-39863 :
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcc 66
>RF00005;tRNA;AAPN01391317.1/4110-4181 :
Length = 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 44 ggtcgcgggttcgaatcccgcc 65
>RF00005;tRNA;ACKY01000137.1/2106-2180 :
Length = 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 47 ggtcgcgggttcgaatcccgcc 68
>RF00005;tRNA;CP001132.1/85796-85868 :
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcc 66
>RF00005;tRNA;CP001173.1/858914-858987 :
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgccaagg 26
||||| ||||||||||||||||||||
Sbjct: 46 ggtcgtgggttcgaatcccgccaagg 71
>RF00005;tRNA;AP009153.1/2447962-2447889 :
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 46 ggtcgcgggttcgaatcccgcc 67
>RF00005;tRNA;CP000804.1/1757243-1757171 :
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcc 66
>RF00005;tRNA;CP001337.1/3258577-3258648 :
Length = 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 44 ggtcgcgggttcgaatcccgcc 65
>RF00005;tRNA;CP000159.1/2247376-2247305 :
Length = 72
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 44 ggtcgcgggttcgaatcccgcc 65
>RF00005;tRNA;CP001230.1/182745-182817 :
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcc 66
>RF00005;tRNA;AAOB01000006.1/84979-85052 :
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 46 ggtcgcgggttcgaatcccgcc 67
>RF00005;tRNA;AE017199.1/327362-327500 :
Length = 139
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 111 ggtcgcgggttcgaatcccgcc 132
>RF00005;tRNA;AJ248288.1/185759-185686 :
Length = 74
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 46 ggtcgcgggttcgaatcccgcc 67
>RF00005;tRNA;L77117.1/138419-138347 :
Length = 73
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 45 ggtcgcgggttcgaatcccgcc 66
>RF00005;tRNA;CP000102.1/288300-288408 :
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 81 ggtcgcgggttcgaatcccgcc 102
>RF00005;tRNA;CP001400.1/1231699-1231788 :
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 62 ggtcgcgggttcgaatcccgcc 83
>RF00005;tRNA;CP001401.1/1844981-1845068 :
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 60 ggtcgcgggttcgaatcccgcc 81
>RF00005;tRNA;BA000002.3/295325-295234 :
Length = 92
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 64 ggtcgcgggttcgaatcccgcc 85
>RF00005;tRNA;BA000002.3/125186-125066 :
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggtcgcgggttcgaatcccgcc 22
||||||||||||||||||||||
Sbjct: 93 ggtcgcgggttcgaatcccgcc 114
