miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00870;mir-423;AAIY01635034.1/442-362 9371:Echinops telfairi
           (small Madagascar hedgehog)
          Length = 81

 Score =  161 bits (81), Expect = 3e-39
 Identities = 81/81 (100%)
 Strand = Plus / Minus

                                                                       
Query: 30  aggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctc 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  aggaagcaagactgaggggcctcagaccgagcttttggaaaatagaaaagtctcgctctc 22

                                
Query: 90  tgcccctcagcctaacttcct 110
           |||||||||||||||||||||
Sbjct: 21  tgcccctcagcctaacttcct 1




>RF00870;mir-423;AAGU02429216.1/1470-1554 9785:Loxodonta africana
           (African savanna elephant)
          Length = 85

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 75  aaaagtctcgctctctgcccctcagcctaact 106
           |||||||||||||||||||||||| |||||||
Sbjct: 36  aaaagtctcgctctctgcccctcaccctaact 5