miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
           Group
          Length = 160

 Score =  180 bits (91), Expect = 4e-45
 Identities = 139/154 (90%), Gaps = 2/154 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||| ||| ||||||||||||||||||| || |||| | ||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98

                                                                       
Query: 65  aatgaatctggacgtatt--tatctagattcattaacaactatgtgaatatggaaaatgc 122
           ||||||||||||| |||   |||||||||||||||||| | || ||||| ||| ||||||
Sbjct: 97  aatgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgc 38

                                             
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||
Sbjct: 37  tagaatgacttacattgtgaaacggagggagtac 4



 Score =  129 bits (65), Expect = 1e-29
 Identities = 131/152 (86%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |  | | || | || ||||||||||||| | || | ||  ||| |||||||
Sbjct: 65  atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           ||||||||||| ||||||||||||||| ||||
Sbjct: 125 agaatgacttatattgtgaaacggaggaagta 156




>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
           Japonica Group
          Length = 153

 Score =  178 bits (90), Expect = 2e-44
 Identities = 135/150 (90%), Gaps = 5/150 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||| |     |||||||||||||||| | || ||||| ||| |||||||||
Sbjct: 65  atgaatctagacat-----tctagattcattaacatcaatatgaatgtgggaaatgctag 119

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||
Sbjct: 120 aatgacttacattgtgaaacggagggagta 149



 Score =  155 bits (78), Expect = 2e-37
 Identities = 132/150 (88%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||      | |||||||||||||||| | || ||||| ||| |||||||||
Sbjct: 89  atgaatctaga-----atgtctagattcattaacatcaatatgaatgtgggaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  178 bits (90), Expect = 2e-44
 Identities = 139/155 (89%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttatct----agattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || ||| |    ||||||||||||| | || |||||||||||||||
Sbjct: 98  atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagtac 4



 Score =  153 bits (77), Expect = 9e-37
 Identities = 135/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  || |||    ||||||||||||||||||| | || ||||| ||| |||||
Sbjct: 65  atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158




>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  174 bits (88), Expect = 2e-43
 Identities = 140/157 (89%), Gaps = 4/157 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 160 tatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgt 101

                                                                       
Query: 64  taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
           |||||||||| |||     ||| |||||||||||||||||| | || || || |||||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaa 41

                                                
Query: 120 tgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 40  tgctagaatgacttacattgtgaaacggaggaagtac 4



 Score =  153 bits (77), Expect = 9e-37
 Identities = 135/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||| |||||| ||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || |||    ||||||||||||||||| || ||||| ||| |||| 
Sbjct: 65  atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
           Japonica Group
          Length = 161

 Score =  165 bits (83), Expect = 2e-40
 Identities = 138/154 (89%), Gaps = 3/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatct-ggacgt--atttatctagattcattaacaactatgtgaatatggaaaatgc 122
           |||||||| | || |  || | | |||||||||||||| | || ||||| ||| ||||||
Sbjct: 65  atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124

                                             
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagtac 158



 Score =  165 bits (83), Expect = 2e-40
 Identities = 136/153 (88%), Gaps = 3/153 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98

                                                                       
Query: 66  atgaatctggacgtatttat---ctagattcattaacaactatgtgaatatggaaaatgc 122
           ||||||||  || ||| |||   ||||||||||||||| | || ||||| ||| ||||||
Sbjct: 97  atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||| ||||
Sbjct: 37  tagaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  163 bits (82), Expect = 9e-40
 Identities = 137/155 (88%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| ||||||||||| |||||||||
Sbjct: 5   tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||    |||| ||| |||||||||||||| |||| || ||||||| ||||
Sbjct: 65  atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||| | ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 127/154 (82%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | ||||||||||  ||| || ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  |  |||  |    ||||||||||||||||||||  ||||| |||  ||||
Sbjct: 98  atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||| ||||
Sbjct: 38  ctagaaagtcttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  163 bits (82), Expect = 9e-40
 Identities = 131/147 (89%), Gaps = 4/147 (2%)
 Strand = Plus / Plus

                                                                       
Query: 13  tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
           |||||| || ||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 12  tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71

                                                                       
Query: 73  tggacgtattta----tctagattcattaacaactatgtgaatatggaaaatgctagaat 128
           | ||  ||| ||    |||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 72  tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131

                                      
Query: 129 gacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158



 Score =  153 bits (77), Expect = 9e-37
 Identities = 135/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||||||||||||| |||| ||||| ||| |||||
Sbjct: 98  atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||||||| || |||||| ||||||
Sbjct: 38  ttagaatgacttacattatggaacggaaggagta 5




>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
           Japonica Group
          Length = 156

 Score =  163 bits (82), Expect = 9e-40
 Identities = 136/153 (88%), Gaps = 2/153 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||
Sbjct: 2   ttatacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatg 61

                                                                       
Query: 63  ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
           | ||||||||| |||  || | |||||||||||| ||| | || ||||| ||| ||||||
Sbjct: 62  tcaatgaatctagac--atctgtctagattcattgacatcaatatgaatgtgggaaatgc 119

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||| ||||||||||||||||
Sbjct: 120 tagaatgacttacattatgaaacggagggagta 152



 Score =  133 bits (67), Expect = 8e-31
 Identities = 130/150 (86%), Gaps = 2/150 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||||||||||||||||| | ||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| |||  |  | |||||||||||| ||| | || ||||| ||| ||||| |||
Sbjct: 92  atgaatctagac--agatgtctagattcattgacatcaatatgaatgtgggaaatgatag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
           Japonica Group
          Length = 160

 Score =  161 bits (81), Expect = 4e-39
 Identities = 138/156 (88%), Gaps = 2/156 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||  ||| ||| |||   |||||||||||||| |||| ||||| || ||||||||
Sbjct: 65  atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124

                                               
Query: 124 agaatgacttacattgtgaaacggagggagtacgtt 159
           | |||||||| |||| ||||||||||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagtacgtt 160



 Score =  113 bits (57), Expect = 7e-25
 Identities = 129/152 (84%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||| || ||||| ||||||||  ||||||||||||| |||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97

                                                                       
Query: 66  atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
           ||||||||   | ||| |||  || |||||||||||| |||  ||||| ||| |||||||
Sbjct: 96  atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           | ||||||||||||||||||||||||| ||||
Sbjct: 36  aaaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
           Group
          Length = 162

 Score =  161 bits (81), Expect = 4e-39
 Identities = 136/154 (88%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||  |||||||||||||  |||||||||||||| || ||
Sbjct: 5   tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| | | ||| |||    ||||||||||||||| | || ||||| |||||||||
Sbjct: 65  atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158



 Score =  155 bits (78), Expect = 2e-37
 Identities = 136/155 (87%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| |||    |||||||||||| || |||| ||||| |||| ||||
Sbjct: 98  atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| |||||||||||||||||| |||||
Sbjct: 38  ctagaatgacatacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
          Length = 162

 Score =  161 bits (81), Expect = 4e-39
 Identities = 136/154 (88%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||  ||||||||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | |||     ||| |||||||||||||||||| | || ||||| ||| |||||
Sbjct: 98  atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagta 5



 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | |||| ||||||||||| | || ||||| ||| |||| 
Sbjct: 65  atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||||||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158




>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
           Group
          Length = 162

 Score =  161 bits (81), Expect = 4e-39
 Identities = 136/154 (88%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||  | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||||||||| | | || ||||| |||||||||
Sbjct: 65  atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158



 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| ||||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99

                                                                       
Query: 66  atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||     ||  ||| | |||||||||||||||| |  | ||||| ||| |||||
Sbjct: 98  atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
           Group
          Length = 150

 Score =  159 bits (80), Expect = 1e-38
 Identities = 134/153 (87%), Gaps = 8/153 (5%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||
Sbjct: 149 ttatacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatg 90

                                                                       
Query: 63  ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
           |||||| ||||         ||||||||| |||||||| | || ||||| ||||||||||
Sbjct: 89  ttaatgtatcta--------tatctagatacattaacatcaatatgaatgtggaaaatgc 38

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||
Sbjct: 37  tagaatgacttacattgtgaaacggagggagta 5



 Score =  117 bits (59), Expect = 5e-26
 Identities = 128/152 (84%), Gaps = 8/152 (5%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||
Sbjct: 3   tatactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           ||||| |||| |        || ||||| |||||||| | || ||||| ||| |||||||
Sbjct: 63  taatgtatctag--------atatagatacattaacatcaatatgaatgtgggaaatgct 114

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| |||||||| ||||
Sbjct: 115 agaatgacttacattgtggaacggaggaagta 146




>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
           Group
          Length = 160

 Score =  159 bits (80), Expect = 1e-38
 Identities = 137/155 (88%), Gaps = 2/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           ||||||||||||||| |||||||||| |||||||||||||| | |||||||||| | |||
Sbjct: 3   tatacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgt 62

                                                                       
Query: 64  taatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| | ||| ||| |||  ||||||||||||||| | || ||||| ||| |||||
Sbjct: 63  taatgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||| ||||||||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagtac 157



 Score =  153 bits (77), Expect = 9e-37
 Identities = 134/152 (88%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97

                                                                       
Query: 66  atgaatctggacgtattta--tctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| ||| ||| ||  |||| ||||||||||| | || ||||| | |||||||||
Sbjct: 96  atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| |||||||| ||||
Sbjct: 36  agaatgacttacattgtggaacggaggaagta 5




>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
           Group
          Length = 156

 Score =  157 bits (79), Expect = 6e-38
 Identities = 133/150 (88%), Gaps = 2/150 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||  ||| | ||||||||||||| || | || ||||| | | |||||||||
Sbjct: 65  atgaatctaga--tatatgtctagattcattagcatcaatatgaatgtaggaaatgctag 122

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||| ||||||||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152



 Score =  151 bits (76), Expect = 3e-36
 Identities = 133/151 (88%), Gaps = 2/151 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| |||||||||||||||| |||||||||| | || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||| |||  |||||||||||||| || | || ||||| ||| |||||||||
Sbjct: 92  atgaatctagacatat--atctagattcattagcatcaatatgaatgtgggaaatgctag 35

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||| |||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
           Group
          Length = 162

 Score =  155 bits (78), Expect = 2e-37
 Identities = 136/155 (87%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||| |||||||||||   |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||||||||||| | || |||||||||  ||||
Sbjct: 98  atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||| |||||
Sbjct: 38  ctagaatgacttacattgtgaaacggaggaagtac 4



 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||| |||| |||||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    ||||  ||| | ||||||||||||||||   || ||||| ||  |||||
Sbjct: 65  atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
           Japonica Group
          Length = 166

 Score =  151 bits (76), Expect = 3e-36
 Identities = 140/159 (88%), Gaps = 8/159 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||  | |||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaaca--actatg--tgaatatggaa 117
           |||||||| |||     ||| ||||||||||||||||||  ||||||  ||||||||  |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||| |||||
Sbjct: 42  aatgctagaatgacttacattgtgaaacggaggaagtac 4



 Score =  125 bits (63), Expect = 2e-28
 Identities = 136/158 (86%), Gaps = 8/158 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcata--tagt--t 61
           |||||||||||||||||||||||| ||||||||||||||| || |||||||  ||||  |
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64

                                                                       
Query: 62  gttaatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaa 117
           |||||||||||| ||   || |||    ||||||||||||||| |  | ||||| ||| |
Sbjct: 65  gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162




>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  149 bits (75), Expect = 1e-35
 Identities = 136/156 (87%), Gaps = 4/156 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||
Sbjct: 159 atacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtt 100

                                                                       
Query: 65  aatgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||    | ||  ||| | |||||||||||||| | | || ||||| ||| ||||
Sbjct: 99  aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40

                                               
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
           | ||||||||||||||||||||||||||||||||||
Sbjct: 39  gatagaatgacttacattgtgaaacggagggagtac 4



 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| |||||||||||||||||| | | |||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| ||||||||||||||||| | ||| ||||| ||  |||||
Sbjct: 65  atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158




>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  147 bits (74), Expect = 5e-35
 Identities = 135/155 (87%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| || |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100

                                                                       
Query: 65  aatgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaat 120
           ||||||| |  || ||| |||     ||||||||||| || |||| ||||||| ||||||
Sbjct: 99  aatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaat 40

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           | |||||||||||||||||||||||||||||||||
Sbjct: 39  gttagaatgacttacattgtgaaacggagggagta 5



 Score =  131 bits (66), Expect = 3e-30
 Identities = 133/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| |||||||| ||||| | | |||||||||| || |
Sbjct: 4   atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63

                                                                       
Query: 65  aatgaatctggacgtatttatct----agattcattaacaactatgtgaatatggaaaat 120
           |||||||||  ||| || ||| |    | |||||||| || |||| ||||| ||||||||
Sbjct: 64  aatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaat 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
           Indica Group
          Length = 150

 Score =  147 bits (74), Expect = 5e-35
 Identities = 131/151 (86%), Gaps = 8/151 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||
Sbjct: 4   atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| |        || |||||||||||| | | || | ||||||||||||||||
Sbjct: 64  aatgaatctag--------atgtagattcattaatatcaatataaatatggaaaatgcta 115

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||
Sbjct: 116 gaatgacttacattgtgaaacggagggagta 146



 Score =  109 bits (55), Expect = 1e-23
 Identities = 123/145 (84%), Gaps = 8/145 (5%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| |||||||||||||| ||| ||| |||| | | |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatat 89

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           ||||||||||  ||      ||||||||||||||||| | || ||||| ||  |||||||
Sbjct: 88  taatgaatct--ac------atctagattcattaacatcaatatgaatgtgagaaatgct 37

                                    
Query: 124 agaatgacttacattgtgaaacgga 148
           |||||||||||||||||||||||||
Sbjct: 36  agaatgacttacattgtgaaacgga 12




>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  147 bits (74), Expect = 5e-35
 Identities = 129/147 (87%), Gaps = 4/147 (2%)
 Strand = Plus / Minus

                                                                       
Query: 13  tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
           ||||||||| ||||||| |||||| | |||||||||||||||||| | || |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92

                                                                       
Query: 73  tggac----gtatttatctagattcattaacaactatgtgaatatggaaaatgctagaat 128
           | |||     ||| |||||||||||||||||||| || ||||| ||| ||||||||||||
Sbjct: 91  tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32

                                      
Query: 129 gacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||
Sbjct: 31  gacttacattgtgaaacggagggagta 5



 Score =  131 bits (66), Expect = 3e-30
 Identities = 133/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 4   atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63

                                                                       
Query: 65  aatgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||    | ||  ||| | ||||||||||||| || | || ||||| ||| ||||
Sbjct: 64  aatgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaat 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           | | |||||||||||||| ||||||||| ||||||
Sbjct: 124 ggtggaatgacttacattatgaaacggaaggagta 158




>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  147 bits (74), Expect = 5e-35
 Identities = 135/155 (87%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||||||||| |||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||||||||| | | || ||||| || ||||||
Sbjct: 65  atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||| |||||| ||||||||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagtac 159



 Score =  113 bits (57), Expect = 7e-25
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||| |||||| ||| ||||||||||||||  ||||||||||| | | |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99

                                                                       
Query: 66  atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||     ||  ||| | |||||||||||||||| | || | ||| ||| |||||
Sbjct: 98  atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
           Indica Group
          Length = 152

 Score =  147 bits (74), Expect = 5e-35
 Identities = 133/153 (86%), Gaps = 6/153 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||||||||||||||||||| |||||||||||||||||||||| ||||   |||
Sbjct: 3   tatacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgt 62

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||||| |||      || || ||||||||||| | || ||||| ||| |||||||
Sbjct: 63  taatgaatctagac------atatatattcattaacatcaatatgaatgtgggaaatgct 116

                                            
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||| ||||||||
Sbjct: 117 agaatgacttacattgtgaaacggggggagtac 149



 Score =  125 bits (63), Expect = 2e-28
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Minus

                                                                       
Query: 14  ccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatct 73
           |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||  
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83

                                                                       
Query: 74  ggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
                ||| | ||||||||||||||||   || | ||| ||| |||||||||||||||||
Sbjct: 82  ----atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgactt 27

                                 
Query: 134 acattgtgaaacggagggagta 155
           ||||||||||||||||| ||||
Sbjct: 26  acattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
           Japonica Group
          Length = 149

 Score =  145 bits (73), Expect = 2e-34
 Identities = 129/149 (86%), Gaps = 9/149 (6%)
 Strand = Plus / Plus

                                                                       
Query: 7   acttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaa 66
           ||||||||||||||| ||||||| ||||||||||||||| |||||| |||| | ||||||
Sbjct: 6   acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65

                                                                       
Query: 67  tgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctaga 126
           | ||||| |         |||||||||||||||| | || ||||||||||||||||||||
Sbjct: 66  taaatctag---------tctagattcattaacatcaatatgaatatggaaaatgctaga 116

                                        
Query: 127 atgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 120/145 (82%), Gaps = 9/145 (6%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||         ||||||| ||||||| | || | ||| ||  |||||||||
Sbjct: 85  atgaatctaga---------ctagatttattaacatcaatataaatgtgagaaatgctag 35

                                    
Query: 126 aatgacttacattgtgaaacggagg 150
           ||||||||||||| |||||||||||
Sbjct: 34  aatgacttacattatgaaacggagg 10




>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| | |||||||||||||| |||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||||||||||| | | || ||||| ||| |||||
Sbjct: 65  atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||| ||||||||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158



 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||| ||||||||||| ||||||||||||||||||||||||||| | | |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | |||||||||||||||| | || | ||| ||| |||||
Sbjct: 98  atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           | | ||||||||||||||||||||||||| |||||
Sbjct: 38  caaaaatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||| |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | ||  ||    | | |||||||||||||||| |||| |||||||||  ||||
Sbjct: 65  atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158



 Score =  127 bits (64), Expect = 5e-29
 Identities = 134/157 (85%), Gaps = 4/157 (2%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||| ||||||| ||||||||||||| |||| |||||||||| ||
Sbjct: 161 ttatactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatg 102

                                                                       
Query: 63  ttaatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaa 118
           ||||||||||| |    || | | |||||| ||||||||||| |||| || || |||  |
Sbjct: 101 ttaatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggca 42

                                                
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||| ||||||||||| ||||
Sbjct: 41  atgctagaatgacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     |||||| ||| ||| ||||| |   || ||||| |||||||||
Sbjct: 98  atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| ||||||||||||||||||||||||||||||
Sbjct: 38  ctataatgacttacattgtgaaacggagggagta 5



 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||   | ||
Sbjct: 4   atactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatt 63

                                                                       
Query: 65  aatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||| ||| | |    |  ||| | |||||||||||||||| | || ||||| ||| ||||
Sbjct: 64  aataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaat 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| |||||||||||||||||| | | |||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||||||||||| | | || ||||| || ||||| 
Sbjct: 65  atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158



 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||| ||||  ||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || |||    ||||||||||||| | | || ||||| ||| |||||
Sbjct: 98  atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
            ||||||||||||||||||||||||||||||||||
Sbjct: 38  ttagaatgacttacattgtgaaacggagggagtac 4




>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||| ||||| ||||| || |||||| ||||||||||||| |||||
Sbjct: 5   tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| |    || ||| ||||||||| |||| |||| ||||| ||| |||||
Sbjct: 65  atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158



 Score =  143 bits (72), Expect = 8e-34
 Identities = 136/157 (86%), Gaps = 4/157 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100

                                                                       
Query: 65  aatgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaat 120
            ||||||||  |  ||| ||    |||||||||||||||| |||| ||||| ||  ||||
Sbjct: 99  gatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaat 40

                                                
Query: 121 gctagaatgacttacattgtgaaacggagggagtacg 157
           | || ||||||||||| ||||||||||||||||||||
Sbjct: 39  gataaaatgacttacaatgtgaaacggagggagtacg 3




>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  145 bits (73), Expect = 2e-34
 Identities = 134/154 (87%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| |||||||||||||||||||||   |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | ||||||||||||||||   || ||||| |||| ||||
Sbjct: 65  atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158



 Score =  131 bits (66), Expect = 3e-30
 Identities = 133/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||  ||||||||||||   |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| ||||||||||||||||||   || ||||| ||| |||||
Sbjct: 98  atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||| ||||||||||||||||||||||||| |||||
Sbjct: 38  ctaaaatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
           Group
          Length = 161

 Score =  143 bits (72), Expect = 8e-34
 Identities = 134/154 (87%), Gaps = 3/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           |||||||||||||||| |||||||| ||||||||||||||| ||||||||||| | || |
Sbjct: 4   atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63

                                                                       
Query: 65  aatgaatctgga---cgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||| ||     ||| ||||||||||||||||||   || | ||||||| |||||
Sbjct: 64  aatgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatg 123

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157



 Score =  109 bits (55), Expect = 1e-23
 Identities = 129/153 (84%), Gaps = 3/153 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| ||||||||| ||| ||||   |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98

                                                                       
Query: 66  atgaatctggacgtattt---atctagattcattaacaactatgtgaatatggaaaatgc 122
           |||||||| ||  ||| |   |||||||||||||| || | || ||||| ||  ||||||
Sbjct: 97  atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| |||||||||| ||||
Sbjct: 37  tagaatgacttacattgcgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
           Indica Group
          Length = 160

 Score =  141 bits (71), Expect = 3e-33
 Identities = 134/154 (87%), Gaps = 2/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    ||||
Sbjct: 4   atacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtt 63

                                                                       
Query: 65  aatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgc 122
           ||||||| | ||| ||| |||  |||||||||||||||    | ||||| || |||||||
Sbjct: 64  aatgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgc 123

                                             
Query: 123 tagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||
Sbjct: 124 tagaatgacttacattgtgaaacggagggagtac 157



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 127/152 (83%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||  ||||||||||    |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97

                                                                       
Query: 66  atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| ||  ||| |||  ||| |||||||||||    | ||||| ||| |||||| 
Sbjct: 96  atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           ||||||||||| ||||||||||||||| ||||
Sbjct: 36  agaatgacttatattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  139 bits (70), Expect = 1e-32
 Identities = 134/155 (86%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||||||| |||||||||||||| |||||||| ||| | ||||
Sbjct: 4   atacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtt 63

                                                                       
Query: 65  aatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaat 120
           ||||| ||| ||   || |||    |||||||||||| || | || ||||||| ||||||
Sbjct: 64  aatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaat 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||| ||||||||||||||||||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagta 158



 Score =  121 bits (61), Expect = 3e-27
 Identities = 131/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| |||||||||||||| | | |||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||| ||||||||| | ||  |||| |||||||||
Sbjct: 98  atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||| ||||
Sbjct: 38  ctagaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
           Japonica Group
          Length = 150

 Score =  139 bits (70), Expect = 1e-32
 Identities = 130/151 (86%), Gaps = 8/151 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||
Sbjct: 4   atacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 63

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| |        || |||||||||||| | | || | ||||||||||||||||
Sbjct: 64  aatgaatctag--------atgtagattcattaatatcaatataaatatggaaaatgcta 115

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
            ||||||||||||||||||||||||||||||
Sbjct: 116 taatgacttacattgtgaaacggagggagta 146



 Score =  101 bits (51), Expect = 3e-21
 Identities = 122/145 (84%), Gaps = 8/145 (5%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| ||||| |||||||| ||| ||| |||| | | |
Sbjct: 148 tatactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatat 89

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           ||||||||||  ||      ||||||||||||||||| | || ||||| ||  |||||||
Sbjct: 88  taatgaatct--ac------atctagattcattaacatcaatatgaatgtgagaaatgct 37

                                    
Query: 124 agaatgacttacattgtgaaacgga 148
           |||||||||||||||||||||||||
Sbjct: 36  agaatgacttacattgtgaaacgga 12




>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  139 bits (70), Expect = 1e-32
 Identities = 134/155 (86%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| |||||||||||| | || ||||||||| | ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtt 100

                                                                       
Query: 65  aatgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||| | ||| |    || |||||||||||||||||| | || ||||||| | ||||
Sbjct: 99  aatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaat 40

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||| ||||
Sbjct: 39  gctagaatgacttacattgtgaaacggaggaagta 5



 Score =  137 bits (69), Expect = 5e-32
 Identities = 133/154 (86%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||| | |||||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || ||    |||| ||||||||||| | || |||||  |||| |||
Sbjct: 65  atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  137 bits (69), Expect = 5e-32
 Identities = 133/154 (86%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64

                                                                       
Query: 66  atgaatctggacgtattt----atctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  ||| |    ||||||||||||||||| |||| ||||||| |  ||||
Sbjct: 65  atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158



 Score =  105 bits (53), Expect = 2e-22
 Identities = 129/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||| || | |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  |    || |||||||||||||||||| | || ||||| ||   | ||
Sbjct: 98  atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 38  ctagaatgacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
           Indica Group
          Length = 144

 Score =  137 bits (69), Expect = 5e-32
 Identities = 129/152 (84%), Gaps = 14/152 (9%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| ||||||| |||||||||||||||||| |||||||| | ||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           |||||||||              ||||||||||||| | || ||||||||| ||||||||
Sbjct: 81  aatgaatct--------------agattcattaacatcaatatgaatatgggaaatgcta 36

                                           
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||
Sbjct: 35  gaatgacttacattgtgaaacggagggagtac 4



 Score =  117 bits (59), Expect = 5e-26
 Identities = 125/150 (83%), Gaps = 14/150 (9%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||              ||||||||||||||||| | || ||||||||| |||||||||
Sbjct: 65  atga--------------atctagattcattaacatcaatatgaatatgggaaatgctag 110

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 111 aatgacttacattatgaaacggaggaagta 140




>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  137 bits (69), Expect = 5e-32
 Identities = 133/154 (86%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| || |||||| ||| ||||||||||||||| |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||    |||||||||||||||| |||| ||||||||   ||||
Sbjct: 65  atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | |||||||||| | || |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||  || |||    ||||||||||||||| |||| ||||| |||  ||| 
Sbjct: 98  atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| |||||||||| ||||||||||| ||||
Sbjct: 38  ctagaaagacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
          Length = 162

 Score =  135 bits (68), Expect = 2e-31
 Identities = 135/157 (85%), Gaps = 4/157 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    | 
Sbjct: 2   ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttata 61

                                                                       
Query: 63  ttaatgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaa 118
           ||||||||||| ||||    ||| | ||||||||||||| || | || || || ||  ||
Sbjct: 62  ttaatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaa 121

                                                
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
           |||||| ||||||||||||||||||||||||||||||
Sbjct: 122 atgctaaaatgacttacattgtgaaacggagggagta 158



 Score =  113 bits (57), Expect = 7e-25
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||| ||||||||| ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||||||||| |    | ||||| ||| |||||
Sbjct: 98  atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||| ||||
Sbjct: 38  ctagaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  135 bits (68), Expect = 2e-31
 Identities = 129/149 (86%), Gaps = 4/149 (2%)
 Strand = Plus / Minus

                                                                       
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
           ||||||||||| ||||||| ||||||||||||||||||||||||||| |  |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94

                                                                       
Query: 71  tctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatgctaga 126
           ||| ||| ||| ||||    |||||||| ||||  |||| ||||||| | ||||||||||
Sbjct: 93  tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34

                                        
Query: 127 atgacttacattgtgaaacggagggagta 155
           |||||||||||| ||||||||||||||||
Sbjct: 33  atgacttacattatgaaacggagggagta 5



 Score =  103 bits (52), Expect = 7e-22
 Identities = 128/153 (83%), Gaps = 4/153 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| |||||||||||||||| | ||||||||||  ||||
Sbjct: 5   tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64

                                                                       
Query: 66  atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
            |||||||     ||  ||| | |||||||||| ||||  | || ||||| ||| |||||
Sbjct: 65  gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124

                                            
Query: 122 ctagaatgacttacattgtgaaacggagggagt 154
           ||||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157




>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
           Japonica Group
          Length = 160

 Score =  131 bits (66), Expect = 3e-30
 Identities = 133/154 (86%), Gaps = 6/154 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||| ||||||| | || | ||| ||  |||||
Sbjct: 65  atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156



 Score =  123 bits (62), Expect = 8e-28
 Identities = 132/154 (85%), Gaps = 6/154 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||  ||||| |||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99

                                                                       
Query: 66  atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           || |||||     ||  ||| | |||||||||||||||| | || ||||||||| |||||
Sbjct: 98  ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           || |||||||||||||||||||||||||||||||
Sbjct: 38  cttgaatgacttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
           Japonica Group
          Length = 160

 Score =  131 bits (66), Expect = 3e-30
 Identities = 133/154 (86%), Gaps = 6/154 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||| ||||||||||| |||||||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97

                                                                       
Query: 66  atgaatctggacgtatttatc----tagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||||    |||||| ||||||| | || | ||| ||  |||||
Sbjct: 96  atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagta 5



 Score =  123 bits (62), Expect = 8e-28
 Identities = 132/154 (85%), Gaps = 6/154 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||  ||||| |||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62

                                                                       
Query: 66  atgaatctg----gacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           || |||||     ||  ||| | |||||||||||||||| | || ||||||||| |||||
Sbjct: 63  ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           || |||||||||||||||||||||||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156




>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
           Group
          Length = 160

 Score =  131 bits (66), Expect = 3e-30
 Identities = 129/149 (86%), Gaps = 2/149 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   ttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatg 68
           ||||||||||||| ||| ||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 8   ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67

                                                                       
Query: 69  aatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgctaga 126
           ||||||||| ||| | |  ||||||||||||  | ||||  |||| |||  ||| |||||
Sbjct: 68  aatctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127

                                        
Query: 127 atgacttacattgtgaaacggagggagta 155
           |||||||| ||||||||||||||||||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156



 Score =  103 bits (52), Expect = 7e-22
 Identities = 124/147 (84%), Gaps = 2/147 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| ||||||||| ||| ||||||||| ||||| |  ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97

                                                                       
Query: 66  atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |  || ||| | || ||||||||||||| |||| ||||| |||  ||||||
Sbjct: 96  atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37

                                      
Query: 124 agaatgacttacattgtgaaacggagg 150
           ||||||||||| ||| |||||||||||
Sbjct: 36  agaatgacttatattatgaaacggagg 10




>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
           Japonica Group
          Length = 143

 Score =  129 bits (65), Expect = 1e-29
 Identities = 129/152 (84%), Gaps = 15/152 (9%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| ||||||| |||||||||||||||||| ||||||      |||
Sbjct: 4   atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtt 57

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| |         |||||||||||||||| | || ||||||||| ||||||||
Sbjct: 58  aatgaatcttg---------tctagattcattaacatcaatatgaatatgggaaatgcta 108

                                           
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||
Sbjct: 109 gaatgacttacattgtgaaacggagggagtac 140



 Score =  109 bits (55), Expect = 1e-23
 Identities = 125/150 (83%), Gaps = 15/150 (10%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||         | |||||||||||||      ||||||||| |||||||||
Sbjct: 79  atgaatctaga---------caagattcattaaca------tgaatatgggaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 34  aatgacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| ||||||||||||||||||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99

                                                                       
Query: 66  atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |    |  ||||||||||||||||||||||   || ||||| ||||||| |
Sbjct: 98  atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||| ||||||||||||||| ||||
Sbjct: 38  ttagaatgacttatattgtgaaacggaggaagta 5



 Score =  123 bits (62), Expect = 8e-28
 Identities = 132/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| |||||||| | ||| ||||||||||||   |||||
Sbjct: 5   tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||      ||| |||||||||||||||| | | || ||||| ||| |||||
Sbjct: 65  atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||| |||||||||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtac 159




>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
           Japonica Group
          Length = 150

 Score =  129 bits (65), Expect = 1e-29
 Identities = 128/150 (85%), Gaps = 8/150 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||| || ||| ||        |||||||||||| | || ||||| |||||||||||||
Sbjct: 86  atgaaactagacata--------gattcattaacatcaatatgaatgtggaaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 34  aatgacttacattatgaaacggaggaagta 5



 Score =  129 bits (65), Expect = 1e-29
 Identities = 128/150 (85%), Gaps = 8/150 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||        | | ||||| |||||||||| | || ||||| ||| |||||||||
Sbjct: 65  atgaatc--------tatgtctagtttcattaacatcaatatgaatgtgggaaatgctag 116

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||| |||||||||
Sbjct: 117 aatgacttacattgtgaaaccgagggagta 146




>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
           Japonica Group
          Length = 143

 Score =  129 bits (65), Expect = 1e-29
 Identities = 129/152 (84%), Gaps = 15/152 (9%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| ||||||| |||||||||||||||||| ||||||      |||
Sbjct: 140 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtt 87

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| |         |||||||||||||||| | || ||||||||| ||||||||
Sbjct: 86  aatgaatcttg---------tctagattcattaacatcaatatgaatatgggaaatgcta 36

                                           
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||
Sbjct: 35  gaatgacttacattgtgaaacggagggagtac 4



 Score =  109 bits (55), Expect = 1e-23
 Identities = 125/150 (83%), Gaps = 15/150 (10%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||||||| |||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||         | |||||||||||||      ||||||||| |||||||||
Sbjct: 65  atgaatctaga---------caagattcattaaca------tgaatatgggaaatgctag 109

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 110 aatgacttacattatgaaacggaggaagta 139




>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||| | | ||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  ||| | |    ||||||||||||||| |||| ||||||| |  ||||
Sbjct: 98  atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||||||||
Sbjct: 38  ctagaatgacttacattatgaaacggagggagta 5



 Score =  113 bits (57), Expect = 7e-25
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||| || | |||||||||| |||||
Sbjct: 5   tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| |    || |||||||||||||||||| | || ||||| ||   | ||
Sbjct: 65  atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158




>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||| |||||||||||||||||||||   |||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | |||||||||||||||| | || ||||| |||  ||||
Sbjct: 98  atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| ||||||||||||||||||||||||||||||
Sbjct: 38  ctataatgacttacattgtgaaacggagggagta 5



 Score =  129 bits (65), Expect = 1e-29
 Identities = 132/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| ||||||||||||||||||   || ||||| ||| |||||
Sbjct: 65  atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| ||||||||| ||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158




>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  125 bits (63), Expect = 2e-28
 Identities = 133/156 (85%), Gaps = 4/156 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||| ||||||| |||||||||||||| |||||||||||| | || 
Sbjct: 3   tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62

                                                                       
Query: 64  taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
            ||||||||| |||     ||||||||||||||||||| || | || || || || ||||
Sbjct: 63  caatgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaa 122

                                               
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
           | ||||||||||||||||| ||||||||||||||||
Sbjct: 123 tactagaatgacttacattatgaaacggagggagta 158



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||| ||||  ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || |||    |||||||||||  || | || ||||| |||||||||
Sbjct: 98  atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||||||||
Sbjct: 38  ctagaatgacttacattatgaaacggagggagta 5




>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
           Japonica Group
          Length = 145

 Score =  123 bits (62), Expect = 8e-28
 Identities = 128/151 (84%), Gaps = 13/151 (8%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||       |||      |||||||||||| | || ||||| ||  |||||||||
Sbjct: 65  atgaatc-------att------gattcattaacatcaatatgaatgtgagaaatgctag 111

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||| |||||||||||||||||||||||||
Sbjct: 112 aatgaattacattgtgaaacggagggagtac 142



 Score =  113 bits (57), Expect = 7e-25
 Identities = 126/150 (84%), Gaps = 13/150 (8%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||       ||       |||||||||||| | || ||||| ||| |||||||||
Sbjct: 81  atgaatc------aat-------gattcattaacatcaatatgaatgtgggaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
           Group
          Length = 156

 Score =  123 bits (62), Expect = 8e-28
 Identities = 131/154 (85%), Gaps = 10/154 (6%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||| ||| |||||||| | |||  
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
               |||| |||    |||| |||||| | ||||||||| | || ||||| |||||||||
Sbjct: 94  ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 38  ctagaatgacttacattgtgaaacggagggagta 5



 Score =  101 bits (51), Expect = 3e-21
 Identities = 129/154 (83%), Gaps = 2/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||| | | ||   ||  || |   |  ||  ||| | || |||||||||||||||||||
Sbjct: 65  atgagtttagatagatacatatgtctagat--acatcaatatgaatatggaaaatgctag 122

                                             
Query: 126 aatgacttacattgtgaaacggagggagtacgtt 159
           ||||||||||||||||||||||||| ||||||||
Sbjct: 123 aatgacttacattgtgaaacggaggaagtacgtt 156




>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  123 bits (62), Expect = 8e-28
 Identities = 132/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| | | ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100

                                                                       
Query: 65  aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| |||     ||| |||||||||||||||||| | || |   ||  ||||||
Sbjct: 99  aatgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaat 40

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
            ||||||||||||||||||||||||||||||||||
Sbjct: 39  actagaatgacttacattgtgaaacggagggagta 5



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||| | | || ||||| ||| |||| |||||||| ||||||||||||||
Sbjct: 88  tctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaa 147

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 148 cggagggagta 158




>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
           Group
          Length = 162

 Score =  123 bits (62), Expect = 8e-28
 Identities = 132/155 (85%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||||| |||||||  |||||| |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | ||  ||    | | |||||||||||||||| |||| ||||| | |  ||||
Sbjct: 98  atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||| |||||||||||||||||
Sbjct: 38  ctagaatgacttacattatgaaacggagggagtac 4



 Score =  113 bits (57), Expect = 7e-25
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||| || |||||||||||| |||||
Sbjct: 5   tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |    || | | |||||| ||||||||||| |||| |  || |||  ||||
Sbjct: 65  atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158




>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
           Group
          Length = 162

 Score =  123 bits (62), Expect = 8e-28
 Identities = 126/147 (85%), Gaps = 4/147 (2%)
 Strand = Plus / Plus

                                                                       
Query: 13  tccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaatc 72
           ||||||||||||||||| |||||||| |||||| ||||||||||| | ||||||||||||
Sbjct: 12  tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71

                                                                       
Query: 73  tggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatgctagaat 128
           | ||   || |||    ||||||||||||| | | |  ||||| | ||||||||||||||
Sbjct: 72  tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131

                                      
Query: 129 gacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158



 Score =  117 bits (59), Expect = 5e-26
 Identities = 132/156 (84%), Gaps = 4/156 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| |||||||||||||| | | |||||| | | | ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100

                                                                       
Query: 65  aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| |||     ||| |||||||||||||||||| | || ||||| ||  ||||
Sbjct: 99  aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40

                                               
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
           | |||||||||||||||||||||||||| |||||||
Sbjct: 39  ggtagaatgacttacattgtgaaacggaaggagtac 4




>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
           Group
          Length = 156

 Score =  123 bits (62), Expect = 8e-28
 Identities = 131/154 (85%), Gaps = 10/154 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||  
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
               |||| |||    |||| |||||| | ||||||||| | || ||||| ||||||| |
Sbjct: 63  ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 53  tgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtac 4



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||| ||| |||||||||||| | |||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93

               
Query: 66  atga 69
           ||||
Sbjct: 92  atga 89




>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  121 bits (61), Expect = 3e-27
 Identities = 131/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | ||||||||||||| || | || | ||| ||| |||| 
Sbjct: 65  atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| ||||||||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158



 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| ||||| ||| |||||||||||| |||| | || ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99

                                                                       
Query: 66  atgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |    |  ||| |||||||||||||||||  | || ||||| ||| |||||
Sbjct: 98  atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||| |||||
Sbjct: 38  ctagaatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  121 bits (61), Expect = 3e-27
 Identities = 131/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99

                                                                       
Query: 66  atgaatctggacgtattt----atctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  || ||| |    ||||||||||||||||| |||| || ||||||  || |
Sbjct: 98  atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||| ||||||||||| ||||
Sbjct: 38  ctagaatgacttacattatgaaacggaggaagta 5



 Score =  107 bits (54), Expect = 5e-23
 Identities = 130/155 (83%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| |||||||||| || |||| || ||||||| |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  |    || | | ||||||||||| || |||| ||||| |||  ||||
Sbjct: 65  atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||| ||||||||||||| |||||||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagtac 159




>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
           Group
          Length = 144

 Score =  121 bits (61), Expect = 3e-27
 Identities = 125/145 (86%), Gaps = 11/145 (7%)
 Strand = Plus / Plus

                                                                       
Query: 12  ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
           |||||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||
Sbjct: 11  ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70

                                                                       
Query: 72  ctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgac 131
           ||  ||     ||||||||||||||||||      | ||||| |||||||||||||||||
Sbjct: 71  ctaaac----atatctagattcattaaca------tcaatat-gaaaatgctagaatgac 119

                                    
Query: 132 ttacattgtgaaacggagggagtac 156
           |||||||||||||||||| ||||||
Sbjct: 120 ttacattgtgaaacggagagagtac 144



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 119/144 (82%), Gaps = 11/144 (7%)
 Strand = Plus / Minus

                                                                       
Query: 12  ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
           |||||||||||||||||| ||||||||||||||       |||||| | |||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgttaatgaat 85

                                                                       
Query: 72  ctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgac 131
           || ||  | ||||    |||||||||||| | || ||||| ||| ||||| |||||||||
Sbjct: 84  ctagatatgttta----gattcattaacatcaatatgaatgtgggaaatgttagaatgac 29

                                   
Query: 132 ttacattgtgaaacggagggagta 155
           |||||||||||||||||| |||||
Sbjct: 28  ttacattgtgaaacggagagagta 5




>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  121 bits (61), Expect = 3e-27
 Identities = 131/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | | |||||||| | ||||||||||||| |||||
Sbjct: 5   tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||||||||||||| |||||||||| |||  ||||
Sbjct: 65  atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            || || | |||||||||||||||||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 127/154 (82%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | || || |||| |||||||||| |||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  ||| | |    ||||||||||||||| |||| ||||| ||   ||||
Sbjct: 98  atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||| | | |||||||||||||||||||||||||
Sbjct: 38  ctaggaagtcttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  121 bits (61), Expect = 3e-27
 Identities = 131/154 (85%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | |  ||
Sbjct: 5   tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||   || |||    |||||||||||| || | || ||||| ||| |||||
Sbjct: 65  atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            |||||||||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158



 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| ||||| |||||||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| |||||||||||||||  | | || ||||| ||  |||||
Sbjct: 98  atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||| ||||||||||||||| |||||
Sbjct: 38  ctagaatgacttatattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
           Group
          Length = 150

 Score =  119 bits (60), Expect = 1e-26
 Identities = 129/153 (84%), Gaps = 8/153 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||| || |||||||||||||||||| | |||||
Sbjct: 5   tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||        |||||||||||||||| | || ||||||| | |||||||||
Sbjct: 65  atgaatctaga--------tctagattcattaacatcaatatgaatatagtaaatgctag 116

                                            
Query: 126 aatgacttacattgtgaaacggagggagtacgt 158
           ||||||||| |||||| |||||||| |||||||
Sbjct: 117 aatgacttatattgtggaacggaggaagtacgt 149



 Score =  105 bits (53), Expect = 2e-22
 Identities = 125/150 (83%), Gaps = 8/150 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||| |||||| ||| |||||||||||||| | | |||||||| | |||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||        |||||||||||||||| | || ||||| ||| ||||| || 
Sbjct: 86  atgaatctaga--------tctagattcattaacatcaatatgaatgtgggaaatggtaa 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||||||||
Sbjct: 34  aatgacttacattatgaaacggagggagta 5




>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
           Group
          Length = 148

 Score =  119 bits (60), Expect = 1e-26
 Identities = 127/151 (84%), Gaps = 10/151 (6%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| 
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           || ||||| |||          | |||||| |||| | || ||||| ||| |||||||||
Sbjct: 84  ataaatctagac----------aaattcatgaacatcaatatgaatgtgggaaatgctag 35

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           |||| ||||||||||||||||||||||||||
Sbjct: 34  aatggcttacattgtgaaacggagggagtac 4



 Score =  109 bits (55), Expect = 1e-23
 Identities = 125/150 (83%), Gaps = 10/150 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  |||||||||||||||||||||||||| | |||| 
Sbjct: 5   tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||          |||| |||||||| || |||| | || ||||| ||| |||||||||
Sbjct: 65  atga----------atttgtctagatttatgaacatcaatatgaatgtgggaaatgctag 114

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 115 aatgacttacattgtgaaacggaggaagta 144




>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
           Japonica Group
          Length = 150

 Score =  119 bits (60), Expect = 1e-26
 Identities = 129/153 (84%), Gaps = 8/153 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||| || |||||||||||||||||| | |||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||        |||||||||||||||| | || ||||||| | |||||||||
Sbjct: 86  atgaatctaga--------tctagattcattaacatcaatatgaatatagtaaatgctag 35

                                            
Query: 126 aatgacttacattgtgaaacggagggagtacgt 158
           ||||||||| |||||| |||||||| |||||||
Sbjct: 34  aatgacttatattgtggaacggaggaagtacgt 2



 Score =  105 bits (53), Expect = 2e-22
 Identities = 125/150 (83%), Gaps = 8/150 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||| |||||| ||| |||||||||||||| | | |||||||| | |||||
Sbjct: 5   tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||        |||||||||||||||| | || ||||| ||| ||||| || 
Sbjct: 65  atgaatctaga--------tctagattcattaacatcaatatgaatgtgggaaatggtaa 116

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||||||||
Sbjct: 117 aatgacttacattatgaaacggagggagta 146




>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
           Indica Group
          Length = 144

 Score =  117 bits (59), Expect = 5e-26
 Identities = 127/151 (84%), Gaps = 14/151 (9%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||            || |||  ||||||||||||| | || ||||| |||||||||||||
Sbjct: 65  at------------atgtat--agattcattaacatcaatatgaatgtggaaaatgctag 110

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||| |||||||||||||||||||||
Sbjct: 111 aatgacttatattgtgaaacggagggagtac 141



 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| |||||||||||||| |||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 80  atgaatct 73




>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
           Japonica Group
          Length = 156

 Score =  117 bits (59), Expect = 5e-26
 Identities = 128/150 (85%), Gaps = 2/150 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||| |||||| | || | || ||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||| | ||  ||| | ||||||||||||| || | || | ||| |||||||||||| 
Sbjct: 65  atgaatttaga--tatatctctagattcattagcatcaatataaatgtggaaaatgctaa 122

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||| ||||||||||||||||||||
Sbjct: 123 aatgacttatattgtgaaacggagggagta 152



 Score =  105 bits (53), Expect = 2e-22
 Identities = 128/152 (84%), Gaps = 2/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||| ||| ||||| |||||||| ||||||| |||| | || |
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| ||  |||  ||||| |||||||| || | |||| ||| ||  ||||||||
Sbjct: 93  aatgaatctagagatat--atctaaattcattagcatcaatgtaaatgtgagaaatgcta 36

                                           
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
            ||||||||||||||||||||||||| |||||
Sbjct: 35  aaatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
           Group
          Length = 146

 Score =  117 bits (59), Expect = 5e-26
 Identities = 127/152 (83%), Gaps = 12/152 (7%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||| | ||| 
Sbjct: 143 atacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtc 84

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           |||| ||            ||||||||||||||| | | || ||||| ||  ||||||||
Sbjct: 83  aatggat------------atctagattcattaatatcaatatgaatgtgagaaatgcta 36

                                           
Query: 125 gaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||
Sbjct: 35  gaatgacttacattgtgaaacggagggagtac 4



 Score =  103 bits (52), Expect = 7e-22
 Identities = 125/150 (83%), Gaps = 12/150 (8%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||| ||||||||||| | | |||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||      ||||      |||| ||| | || ||||||||| |||||||||
Sbjct: 65  atgaatctaga------tatc------cattgacatcaatatgaatatgggaaatgctag 112

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 113 aatgacttacattgtgaaacggaggaagta 142




>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
           Indica Group
          Length = 160

 Score =  115 bits (58), Expect = 2e-25
 Identities = 130/153 (84%), Gaps = 2/153 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| |||||||  | ||||||||||  |||||||||||||  |||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97

                                                                       
Query: 66  atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |  ||| || || ||||||||||||||| | || ||||||| |  ||||||
Sbjct: 96  atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37

                                            
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
           |||| | |||||||| |||||||||||||||||
Sbjct: 36  agaaagtcttacattatgaaacggagggagtac 4



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 125/152 (82%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | |||||||||| || | |||||||| | |||||
Sbjct: 5   tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatt--tatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |   |||   | ||||||||||||||||  ||| ||||| |||| ||||||
Sbjct: 65  atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           |||| | |||||||| ||||||||||| ||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagta 156




>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  115 bits (58), Expect = 2e-25
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||| ||| ||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| |||     | |||| ||||||||||| |||| |||||||||  | | 
Sbjct: 98  atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||| | ||||||||||||||||||||||||||
Sbjct: 38  ctagaaagtcttacattgtgaaacggagggagtac 4



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||| | | |||| |||||||||| |||||
Sbjct: 5   tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | |||     ||| | |||||||||||||||| |||| ||||| |||  ||| 
Sbjct: 65  atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  115 bits (58), Expect = 2e-25
 Identities = 134/159 (84%), Gaps = 4/159 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
           |||||||||||||||||||| |||||||  | |||||||||| ||||||||||||||| |
Sbjct: 162 cttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagat 103

                                                                       
Query: 62  gttaatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaa 117
           |||||||||||| ||  ||    | | |||||||||||||||| |||| ||||| ||   
Sbjct: 102 gttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagg 43

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||| || | |||||||| |||||||||||||||||
Sbjct: 42  aatgctaaaaagtcttacattatgaaacggagggagtac 4



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | || ||||||| | ||||||||||||| |||||
Sbjct: 5   tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| | |||||||||||||||| |||| ||||| |||  ||||
Sbjct: 65  atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158




>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  115 bits (58), Expect = 2e-25
 Identities = 134/159 (84%), Gaps = 4/159 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
           |||||||||||||||||||| |||||||  | |||||||||| ||||||||||||||| |
Sbjct: 1   cttatacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagat 60

                                                                       
Query: 62  gttaatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaa 117
           |||||||||||| ||  ||    | | |||||||||||||||| |||| ||||| ||   
Sbjct: 61  gttaatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagc 120

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||| || | |||||||| |||||||||||||||||
Sbjct: 121 aatgctaaaaagtcttacattatgaaacggagggagtac 159



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | || ||||||| | ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||     ||| | |||||||||||||||| |||| ||||| |||  ||||
Sbjct: 98  atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| ||||||||||| ||||
Sbjct: 38  ctagaaagtcttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
           Group
          Length = 142

 Score =  115 bits (58), Expect = 2e-25
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||
Sbjct: 77  tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18

                         
Query: 143 aacggagggagtac 156
           ||||||||||||||
Sbjct: 17  aacggagggagtac 4



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| |||||||||||||| | | |||||||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||| ||||||||||||||| ||||
Sbjct: 106 tagaatgacttatattgtgaaacggaggaagta 138




>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score =  113 bits (57), Expect = 7e-25
 Identities = 133/158 (84%), Gaps = 4/158 (2%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| |||||||||||||||||||  | || ||| |||  |||||||||||||| ||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 102

                                                                       
Query: 63  ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
           ||||||||||| |||    |||| ||||||| |||||||||| |||| |||||||||  |
Sbjct: 101 ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 42

                                                 
Query: 119 atgctagaatgacttacattgtgaaacggagggagtac 156
           || |||||| | |||| ||| |||||||||||||||||
Sbjct: 41  atactagaaagtcttatattatgaaacggagggagtac 4



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 126/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||| |||  | |||||| ||| |||| |||||||||| |||||
Sbjct: 5   tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           ||||| || ||  |||  ||    ||||||||||||||| |||| ||||| |||| ||| 
Sbjct: 65  atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| || | |||||||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
           Group
          Length = 153

 Score =  113 bits (57), Expect = 7e-25
 Identities = 128/150 (85%), Gaps = 5/150 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||||||||||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||| ||  | ||    |  |||||||||||||| | || ||||| |||||||||||||
Sbjct: 89  atgaaact--atgtc---acatagattcattaacatcaatatgaatgtggaaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 34  aatgacttacattatgaaacggaggaagta 5



 Score =  113 bits (57), Expect = 7e-25
 Identities = 128/150 (85%), Gaps = 5/150 (3%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||||||  | |   | |  ||| |||||||||| | || ||||| ||  |||||||||
Sbjct: 65  atgaatct--atg---tgacatagtttcattaacatcaatatgaatgtgagaaatgctag 119

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||| |||||||||
Sbjct: 120 aatgacttacattgtgaaaccgagggagta 149




>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
           Indica Group
          Length = 160

 Score =  113 bits (57), Expect = 7e-25
 Identities = 129/152 (84%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64

                                                                       
Query: 66  atgaatctgg--acgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |  ||  || | |||||||||||||||| |||  |||||||    ||||||
Sbjct: 65  atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           | || | |||||||| ||||||||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagta 156



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 130/156 (83%), Gaps = 2/156 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||| |||||||  | || ||||||| |  | |||||| ||| ||
Sbjct: 159 ttatactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatg 100

                                                                       
Query: 63  ttaatgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||||| ||| ||| | |  ||||||||||||||| |||| ||||| |||  |||
Sbjct: 99  ttaatgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaat 40

                                               
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
           ||||||| |||||||||| ||||||||||| |||||
Sbjct: 39  gctagaaagacttacattatgaaacggaggaagtac 4




>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
           Japonica Group
          Length = 150

 Score =  113 bits (57), Expect = 7e-25
 Identities = 126/150 (84%), Gaps = 8/150 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| | |||||||||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||| | ||        ||||||||||||| || | || | |||||| ||||| ||||
Sbjct: 86  atgaatttaga--------tctagattcattagcatcaatataaatatgaaaaatactag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||
Sbjct: 34  aatgacttacattgtgaaacggagggagta 5



 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 125/152 (82%), Gaps = 8/152 (5%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| ||||||||| ||||  || ||| |||| | || 
Sbjct: 3   tatactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgc 62

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||||| ||        |||| |||||||| || | || ||||| | |||||||||
Sbjct: 63  taatgaatctaga--------tctaaattcattagcatcaatatgaatgtagaaaatgct 114

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           ||||||| ||||||||||||||||||||||||
Sbjct: 115 agaatgatttacattgtgaaacggagggagta 146




>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  113 bits (57), Expect = 7e-25
 Identities = 133/158 (84%), Gaps = 4/158 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| |||||||||||||||||||  | || ||| |||  |||||||||||||| ||
Sbjct: 2   ttatactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatg 61

                                                                       
Query: 63  ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
           ||||||||||| |||    |||| ||||||| |||||||||| |||| |||||||||  |
Sbjct: 62  ttaatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggca 121

                                                 
Query: 119 atgctagaatgacttacattgtgaaacggagggagtac 156
           || |||||| | |||| ||| |||||||||||||||||
Sbjct: 122 atactagaaagtcttatattatgaaacggagggagtac 159



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 126/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||| |||  | |||||| ||| |||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           ||||| || ||  |||  ||    ||||||||||||||| |||| ||||| |||| ||| 
Sbjct: 98  atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| || | |||||||||||||||||||||||||
Sbjct: 38  ctaaaaagtcttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
          Length = 162

 Score =  113 bits (57), Expect = 7e-25
 Identities = 130/154 (84%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||| |||||||||||||||||||||   |||||
Sbjct: 5   tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | ||||||||||||| || | || | ||| || ||||||
Sbjct: 65  atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||||| |||| ||||||||||||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158



 Score =  101 bits (51), Expect = 3e-21
 Identities = 130/156 (83%), Gaps = 4/156 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||| |||  |||||||||||||  |||||| |||| | || 
Sbjct: 160 tatactccctccgtttcacaatataagccattctagcatttttcacatttatattgatga 101

                                                                       
Query: 64  taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
           |||||||||| |||     ||| ||||||||||||||||||   || ||||| ||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaa 41

                                               
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 40  tgctacaatgacttatattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
          Indica Group
          Length = 111

 Score =  111 bits (56), Expect = 3e-24
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75  tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16

                       
Query: 145 cggagggagtac 156
           |||||| |||||
Sbjct: 15  cggaggaagtac 4



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 130 acttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||
Sbjct: 82  acttacattgtgaaacggagggagta 107




>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
          Indica Group
          Length = 128

 Score =  111 bits (56), Expect = 3e-24
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score =  105 bits (53), Expect = 2e-22
 Identities = 65/69 (94%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 73  tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 13  gagggagta 5



 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                 
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatag 71



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 71  ctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124




>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
           Group
          Length = 155

 Score =  111 bits (56), Expect = 3e-24
 Identities = 127/150 (84%), Gaps = 3/150 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||| |||||||||||| |||| | |||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||| ||  |   ||  || ||| |||||||||| | || ||||| ||| ||||  |||
Sbjct: 91  atgaaacttaa---atagatgtagtttcattaacatcaatatgaatgtgggaaataatag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||| ||||||||||||||||||||
Sbjct: 34  aatgacttatattgtgaaacggagggagta 5



 Score =  109 bits (55), Expect = 1e-23
 Identities = 129/153 (84%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||||||| ||| ||||||||  ||||||||||||||||| | ||
Sbjct: 2   ttatactccctccgtttcacaatataagtcattctattatttcccacattcatattgatg 61

                                                                       
Query: 63  ttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgc 122
           |||||||| ||  |  ||||||   || |||||||||| | || | ||| ||| |||| |
Sbjct: 62  ttaatgaaactacatctattta---agtttcattaacatcaatataaatgtgggaaatac 118

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||| ||||
Sbjct: 119 tagaatgacttacattgtgaaacggaggaagta 151




>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  111 bits (56), Expect = 3e-24
 Identities = 132/157 (84%), Gaps = 4/157 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| |||||||||||||| |||| ||||| | |||||||||||||| |||| | |||
Sbjct: 3   tatactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgt 62

                                                                       
Query: 64  taatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaa 119
           | |||||||| ||| ||    | |||||||||||||||||| | || | ||| ||| |||
Sbjct: 63  ttatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaa 122

                                                
Query: 120 tgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| |||||||||| |||||||||||||| |||||
Sbjct: 123 tgctaaaatgacttactttgtgaaacggaggaagtac 159



 Score =  105 bits (53), Expect = 2e-22
 Identities = 129/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||| |||| ||||| |||||||||||||||| |||| | |||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99

                                                                       
Query: 66  atgaatc----tggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||    | ||  ||| | ||||||||||| |||| | || | ||| ||| |||||
Sbjct: 98  atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           | | |||||||||| |||||||||||||||||||
Sbjct: 38  caaaaatgacttactttgtgaaacggagggagta 5




>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
          Indica Group
          Length = 139

 Score =  109 bits (55), Expect = 1e-23
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                      
Query: 3  ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
          ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||
Sbjct: 2  ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61

                     
Query: 63 ttaatgaatct 73
          | |||||||||
Sbjct: 62 tcaatgaatct 72



 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||| ||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75  tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 15  cggaggaagta 5



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatat 84




>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
           Group
          Length = 161

 Score =  109 bits (55), Expect = 1e-23
 Identities = 132/156 (84%), Gaps = 5/156 (3%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| ||||||||  |||| |||||||||||| | |||
Sbjct: 159 tatactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgt 100

                                                                       
Query: 64  taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
           |||||||||| |||     ||| |||||||||||||||| | | || ||||| ||| |||
Sbjct: 99  taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40

                                               
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
             ||||||| ||||||||||| ||||||||||||||
Sbjct: 39  -actagaataacttacattgtaaaacggagggagta 5



 Score =  107 bits (54), Expect = 5e-23
 Identities = 131/155 (84%), Gaps = 5/155 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||| ||||||||| | |||||||  |||||||||||||||| | | ||
Sbjct: 4   atactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatt 62

                                                                       
Query: 65  aatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| ||   || |||    ||||||||||||||| | || ||||| ||||||||
Sbjct: 63  aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaat 122

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
             |||||||||||||||||||||||||||||||||
Sbjct: 123 attagaatgacttacattgtgaaacggagggagta 157




>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
           Group
          Length = 138

 Score =  109 bits (55), Expect = 1e-23
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 75  tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 15  cggagggagta 5



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| |||||||||||||| |||||||||||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
           |||||||||||||||| |||| || |||||||| |||||||||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||||||||||| |||| ||||||||||| ||||
Sbjct: 96  aaatgttagaatgacttccattatgaaacggaggaagta 134




>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
           Japonica Group
          Length = 158

 Score =  109 bits (55), Expect = 1e-23
 Identities = 127/151 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           |||||||||||||||||||||||||  | || |||| || ||||||||||| ||| ||||
Sbjct: 4   atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||||||||| ||| ||| ||| |||||||||||||| || | || || |||  | |||||
Sbjct: 64  aatgaatctagacatatgtatttagattcattaacatctttatgtatgtgggtagtgcta 123

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
            || | |||| ||||||||||||||||||||
Sbjct: 124 aaaagtcttatattgtgaaacggagggagta 154



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 121/150 (80%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| |||  | || ||||| | ||||||| |||| || |||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||||||||  |   || | |||||||||||||||| |||  ||||| |||  || |||| 
Sbjct: 94  atgaatctaaatacatatgtctagattcattaacatctaaatgaatgtgggcaacgctac 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           || | |||||||||||||||||||| ||||
Sbjct: 34  aaagtcttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
           Group
          Length = 144

 Score =  109 bits (55), Expect = 1e-23
 Identities = 126/151 (83%), Gaps = 14/151 (9%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||        | |||      |||||||||||||| | || ||||| ||| |||||||||
Sbjct: 65  at--------atgta------tagattcattaacatcaatatgaatgtgggaaatgctag 110

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||| |||||||||||||||||||||
Sbjct: 111 aatgacttatattgtgaaacggagggagtac 141



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 80  atgaatct 73




>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
           Indica Group
          Length = 149

 Score =  107 bits (54), Expect = 5e-23
 Identities = 125/150 (83%), Gaps = 9/150 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
                    ||   || |||||||||| ||||||| | || | ||||||  |||||||||
Sbjct: 65  ---------gatagatctatctagatttattaacatcaatataaatatgagaaatgctag 115

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||
Sbjct: 116 aatgacttacattgtgaaacggagggagta 145



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 123/151 (81%), Gaps = 9/151 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||| || ||| |||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           || ||||| ||   || ||||||   ||||      | || ||||| ||| |||||||| 
Sbjct: 85  ataaatctagatagatctatcta---tcat------caatatgaatgtgggaaatgctaa 35

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||| |||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  107 bits (54), Expect = 5e-23
 Identities = 130/155 (83%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | || ||||||| |||| |||||| ||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||    |||| | | |||||||||||||  |||| || |||||   ||||
Sbjct: 98  atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||| | ||||||||||||||||||||||||||
Sbjct: 38  ctagaaagtcttacattgtgaaacggagggagtac 4



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 125/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||||||| | || || |||||||  ||||
Sbjct: 5   tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  ||  ||  ||    ||||||||||||||| |||  |||||||||  ||||
Sbjct: 65  atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||| || | |||||||||||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158




>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
           Indica Group
          Length = 153

 Score =  107 bits (54), Expect = 5e-23
 Identities = 129/152 (84%), Gaps = 9/152 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||| |||||||||||||| || ||||||||||||||||||| ||      ||||
Sbjct: 5   tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacattgat------gtta 57

                                                                       
Query: 66  atgaatctggacgtatttat--ctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| ||   || |||  ||||||||||||||| | || ||||||||| |||||||
Sbjct: 58  atgaatctagatagatatatgtctagattcattaacatcaatatgaatatgggaaatgct 117

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           | ||||||||| ||||||||||||||||||||
Sbjct: 118 aaaatgacttatattgtgaaacggagggagta 149



 Score =  101 bits (51), Expect = 3e-21
 Identities = 129/153 (84%), Gaps = 9/153 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| ||| ||||| |||||||||||| |||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90

                                                                       
Query: 66  atgaatctggac--gtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||| |||   ||| ||||||||||||||||||      | ||| ||| |||||||
Sbjct: 89  atgaatctagacatatatctatctagattcattaaca------tcaatgtgggaaatgct 36

                                            
Query: 124 agaatgacttacattgtgaaacggagggagtac 156
           |||| ||||||||||||||||| |||| |||||
Sbjct: 35  agaa-gacttacattgtgaaacagaggaagtac 4




>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score =  105 bits (53), Expect = 2e-22
 Identities = 131/155 (84%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||| ||||||| ||||||||||||||| || ||| |||||| ||||
Sbjct: 4   atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63

                                                                       
Query: 65  aatgaatct--ggacgtattta--tctagattcattaacaactatgtgaatatggaaaat 120
           | |||||||  | | |||| ||  |||||||||| ||||| | | |||||| || |||||
Sbjct: 64  agtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaat 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||| ||||||||||||| |||||| |||||||||
Sbjct: 124 gctacaatgacttacattatgaaacagagggagta 158



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||| ||||| |||| | ||||||  |||||||||||||||||||||| |||||||
Sbjct: 73  tagattcactaacatctatatcaatatgagaaatgctagaatgacttacattatgaaacg 14

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 13  gagggagta 5




>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
           (African rice)
          Length = 162

 Score =  105 bits (53), Expect = 2e-22
 Identities = 129/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| |||||||  | |||||||||| |||||||||| |||| || ||
Sbjct: 5   tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||  || ||    | |||||||||||||| |||| |||||  ||  ||||
Sbjct: 65  atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||||||| ||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99

                                                                       
Query: 66  atgaatctgga----cgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  |      ||| | ||||||||||||| || |||||||||| |||  ||||
Sbjct: 98  atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| ||||||||||| ||||
Sbjct: 38  ctagaaagtcttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  105 bits (53), Expect = 2e-22
 Identities = 129/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| |||| |||||| ||| |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| |||    |||| ||| |||||||||||||| | || || |  |||  ||| 
Sbjct: 65  atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 128/155 (82%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| |||||||||||||||||||  | |||||| ||| ||||| | ||||| | ||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100

                                                                       
Query: 65  aatgaatctgga--cgtatttat--ctagattcattaacaactatgtgaatatggaaaat 120
           |||||||||  |  | ||  |||  ||||||||||||||| |||  |||||||||  |||
Sbjct: 99  aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           ||||||| | |||||||||||||||||||| ||||
Sbjct: 39  gctagaaagtcttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score =  105 bits (53), Expect = 2e-22
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72

                
Query: 65  aatga 69
           |||||
Sbjct: 71  aatga 67



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64

           
Query: 66 a 66
          |
Sbjct: 65 a 65



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  tgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
           ||||||||| | || ||||| ||| |||||||||||||||||||||||||||||||||| 
Sbjct: 67  tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126

               
Query: 152 agta 155
           ||||
Sbjct: 127 agta 130




>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
          Japonica Group
          Length = 141

 Score =  103 bits (52), Expect = 7e-22
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||| |||| ||||||||||||||||||||||||||| | |||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78

             
Query: 66  at 67
           ||
Sbjct: 77  at 76




>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
          Japonica Group
          Length = 144

 Score =  103 bits (52), Expect = 7e-22
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 5  tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 75  tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16

                       
Query: 145 cggagggagtac 156
           |||||| |||||
Sbjct: 15  cggaggtagtac 4




>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
           Group
          Length = 134

 Score =  103 bits (52), Expect = 7e-22
 Identities = 55/56 (98%)
 Strand = Plus / Minus

                                                                   
Query: 2   cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 134 cttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                               
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatata 57



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 82  tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 43  aaatgctagaataacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
           Indica Group
          Length = 162

 Score =  101 bits (51), Expect = 3e-21
 Identities = 130/156 (83%), Gaps = 4/156 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||| ||||||| |||||||||||||| |||||||||||| | || 
Sbjct: 3   tatactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgc 62

                                                                       
Query: 64  taatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaa 119
            ||||||||| |||     ||| ||||||||||||||| || | || || || || | ||
Sbjct: 63  caatgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaa 122

                                               
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
           |  |||||||||||||||| ||||||||||||||||
Sbjct: 123 tagtagaatgacttacattatgaaacggagggagta 158



 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||  || | || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 75  tctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaa 16

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 15  cggagggagta 5




>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
           Japonica Group
          Length = 159

 Score =  101 bits (51), Expect = 3e-21
 Identities = 127/151 (84%), Gaps = 1/151 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| |||||| | |||||||||||||||||| | ||  |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96

                                                                       
Query: 66  atgaatctggac-gtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
           ||| |||| |||  ||| |||||||||||||||  | | || ||||| ||| |||| |||
Sbjct: 95  atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
           |||||||||| ||||||||||||||| ||||
Sbjct: 35  gaatgacttatattgtgaaacggaggaagta 5



 Score =  101 bits (51), Expect = 3e-21
 Identities = 127/151 (84%), Gaps = 1/151 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||||||| ||||||||||||||||| | |  ||
Sbjct: 5   tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64

                                                                       
Query: 66  atgaatctggacgtattta-tctagattcattaacaactatgtgaatatggaaaatgcta 124
           |||||||| ||   || || ||||||| ||||  || | || ||||| ||| ||||| | 
Sbjct: 65  atgaatctagatagatatagtctagatccattggcatcaatatgaatgtgggaaatggtg 124

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
           |||||||||||||| ||||||||||||||||
Sbjct: 125 gaatgacttacattatgaaacggagggagta 155




>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
           Japonica Group
          Length = 149

 Score =  101 bits (51), Expect = 3e-21
 Identities = 125/151 (82%), Gaps = 9/151 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||| ||||||||| ||||||||||||||||||||||||||   | | ||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcataatctagata 86

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
                    ||  ||| | |||||||||||||||| | || ||||||||  |||||||||
Sbjct: 85  ---------gatatatatgtctagattcattaacatcaatatgaatatgagaaatgctag 35

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||||||| |||||||||||||||||
Sbjct: 34  aatgacttacattatgaaacggagggagtac 4



 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 124/151 (82%), Gaps = 9/151 (5%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| | |||||
Sbjct: 5   tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| ||| ||| ||||||  |  ||||         ||||| ||| |||||||||
Sbjct: 65  atgaatctagacatatatatctatctagatta---------tgaatgtgggaaatgctag 115

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||| ||||||||| |||||
Sbjct: 116 aatgacttacattgtaaaacggaggaagtac 146




>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
           Japonica Group
          Length = 138

 Score =  101 bits (51), Expect = 3e-21
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75

                  
Query: 66  atgaatc 72
           |||||||
Sbjct: 74  atgaatc 68



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           ||||| |||||||||||| | || ||||| ||| |||||||| |||||||||||||||||
Sbjct: 62  tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 122 aacggaggaagta 134



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| |||||||||| | ||||||||||||||||||||||| |||||||
Sbjct: 53  tgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtac 4



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                       
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||||||||||||||| ||||| | |||||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatat 56




>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
           Japonica Group
          Length = 139

 Score =  101 bits (51), Expect = 3e-21
 Identities = 54/55 (98%)
 Strand = Plus / Minus

                                                                  
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 138 ttatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 84



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4  atactccctccatttcacaatgtaagtcattctagcatttcccacattcatat 56



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||| |   || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 65  tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 125 cggaggaagta 135




>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 129/155 (83%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||| ||| |||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacgtat----ttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| |||     | |||| ||||||||||| |||| |||||||||  | | 
Sbjct: 98  atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||| | ||||||| ||||||||||||||||||
Sbjct: 38  ctagaaagtcttacatggtgaaacggagggagtac 4



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||| ||||||  | |||||| | | |||| |||||||||| |||||
Sbjct: 5   tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | |||     ||| | |||||||||||||||| |||| |||||||||  ||| 
Sbjct: 65  atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
           Japonica Group
          Length = 118

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55

                 
Query: 66  atgaat 71
           ||||||
Sbjct: 54  atgaat 49



 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtacg 157
           ||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  tgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtacg 3



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                            
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
          |||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||||| | || ||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 49  attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108

                 
Query: 150 ggagta 155
           | ||||
Sbjct: 109 gaagta 114




>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
           Japonica Group
          Length = 133

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11

                 
Query: 150 ggagta 155
           | ||||
Sbjct: 10  gaagta 5



 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| |||||||||||||| ||| |||||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64

                
Query: 66 atgaat 71
          ||||||
Sbjct: 65 atgaat 70



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 81  tgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 12  ctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||| ||||||| |||||||||||||| ||| ||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatat 78




>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 129/155 (83%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| |||||||  | ||||||||||  | |||||||||||| ||||
Sbjct: 4   atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63

                                                                       
Query: 65  aatgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| ||| ||    | | | |||||||||||||| |||| ||||| |||| || 
Sbjct: 64  aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaa 123

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
            |||||| | |||||||| ||||||||||||||||
Sbjct: 124 cctagaaagtcttacattatgaaacggagggagta 158



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 126/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | ||||||  ||  |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99

                                                                       
Query: 66  atgaatctggacg----tatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  ||     ||| | |||||||||||||||| |||| ||||| | || ||||
Sbjct: 98  atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| ||||||||||| ||||
Sbjct: 38  ctagaaagtcttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
          Indica Group
          Length = 134

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64

                
Query: 66 atgaat 71
          ||||||
Sbjct: 65 atgaat 70



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||||| | || ||||| ||  |||||||||||||||||||||||||||||||||
Sbjct: 70  attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11

                  
Query: 150 ggagtac 156
           | |||||
Sbjct: 10  gaagtac 4



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
           ||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 131 atactccctccgtttcacaatgtaagtcattctagcattttccatattcatata 78




>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
           Japonica Group
          Length = 140

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 123/150 (82%), Gaps = 18/150 (12%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||||| ||||||||        
Sbjct: 5   tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat-------- 56

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
            |||         ||| |||||||||||||||||| | || ||||| ||| ||||| |||
Sbjct: 57  -tga---------tatctatctagattcattaacatcaatatgaatgtgggaaatgttag 106

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||
Sbjct: 107 aatgacttacattgtgaaacggagggagta 136



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||| |||||||||||||||||| | |||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 76  atgaatct 69




>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
           Japonica Group
          Length = 110

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 93/107 (86%), Gaps = 4/107 (3%)
 Strand = Plus / Plus

                                                                       
Query: 31  tcattctagcatttcccacattcatatagttgttaatgaatctggacgtatttatc---- 86
           ||||||||||||||||||||||||||| | ||||||||||||| ||| ||| ||||    
Sbjct: 4   tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatt 63

                                                          
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
           |||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 64  tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 91/107 (85%), Gaps = 4/107 (3%)
 Strand = Plus / Minus

                                                                       
Query: 31  tcattctagcatttcccacattcatatagttgttaatgaatc----tggacgtatttatc 86
           ||||||||||||||||||||||||||| | ||||||||||||    | ||  ||| | ||
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtc 48

                                                          
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
           |||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 47  tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1




>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
           Group
          Length = 138

 Score = 99.6 bits (50), Expect = 1e-20
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                       
Query: 79  tatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacatt 138
           |||| |||||||||||||||||   || ||||||||||||||||||||| ||||||||||
Sbjct: 58  tattcatctagattcattaacattaatatgaatatggaaaatgctagaaggacttacatt 117

                             
Query: 139 gtgaaacggagggagtac 156
           |||||||||||| |||||
Sbjct: 118 gtgaaacggaggaagtac 135



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| || ||||||||||| ||| ||||||||   |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 74  atgaatct 67



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 53  tgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5




>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
           Group
          Length = 162

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 128/154 (83%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| ||||||| ||||||  |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  ||      || | ||||||||||||| || |||  ||||| |||  ||||
Sbjct: 65  atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158



 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 128/155 (82%), Gaps = 4/155 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| |||||||||||||||||||  | |||||||||| |||| |||||| ||| || |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100

                                                                       
Query: 65  aatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| |||    |||| | | ||||||||||||||  ||| || || |||  |||
Sbjct: 99  aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           ||||||| | |||||||||||||||||||| ||||
Sbjct: 39  gctagaaagtcttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
           Indica Group
          Length = 150

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 124/150 (82%), Gaps = 8/150 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||| |||||||| | ||||| |||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||| | ||        ||||||||||||| || | || ||||| || ||||||||||
Sbjct: 86  atgaatttaga--------tctagattcattagcatcaatatgaatgtgaaaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||| ||||||||||||||||||||||||||
Sbjct: 34  aataacttacattgtgaaacggagggagta 5



 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 125/152 (82%), Gaps = 8/152 (5%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||||||| | ||||||||||||  ||||||||||| | || 
Sbjct: 3   tatactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgc 62

                                                                       
Query: 64  taatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgct 123
           |||||||||| |        ||||| |||||||| || | || | ||| | |||||||||
Sbjct: 63  taatgaatctag--------atctaaattcattagcatcaatataaatgtagaaaatgct 114

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           | ||||| ||||||||||||||||||||||||
Sbjct: 115 aaaatgatttacattgtgaaacggagggagta 146




>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
           Group
          Length = 140

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||| ||||||||||| | || ||||||||||||||| ||||||||||||||||||||
Sbjct: 77  tatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtga 18

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 17  aacggaggaagta 5



 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
          |||||||||||||||||||||||||| |||||||| ||||| ||| |||||||| | |||
Sbjct: 3  tatacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgt 62

                  
Query: 64 taatgaat 71
          ||||||||
Sbjct: 63 taatgaat 70



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 88  tgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtac 137




>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
          Length = 136

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4  atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           ||||||||||||||| ||   || ||||| ||| |||||||||||||||||| |||||||
Sbjct: 60  tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119

                         
Query: 143 aacggagggagtac 156
           ||||||||||||||
Sbjct: 120 aacggagggagtac 133



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 81



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 53  tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
           Indica Group
          Length = 142

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 122/150 (81%), Gaps = 16/150 (10%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||                ||||||||| || | || ||||| ||| |||||||||
Sbjct: 78  atgaatc----------------gattcattagcatcaatatgaatgtgggaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||
Sbjct: 34  aatgacttacattgtgaaacggagggagta 5



 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 122/150 (81%), Gaps = 16/150 (10%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | || ||
Sbjct: 5   tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||                ||||||||| || | || ||||| ||| |||||||||
Sbjct: 65  atgaatc----------------gattcattagcatcaatatgaatgtgggaaatgctag 108

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||||||||
Sbjct: 109 aatgacttacattatgaaacggagggagta 138




>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
           Group
          Length = 151

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 125/151 (82%), Gaps = 7/151 (4%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| | ||||||||  ||| |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| |||        ||||||||||||||| |||| || || |||  ||||||||
Sbjct: 65  atgaatctagac-------actagattcattaacatctatatgtatgtgggcaatgctag 117

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           || | |||||||| |||||||||||||||||
Sbjct: 118 aaagtcttacattatgaaacggagggagtac 148



 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 124/150 (82%), Gaps = 7/150 (4%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | |||||||||| ||||||| ||||||| |||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           |||||||| |       | |||||||||||||||| ||| |||||| ||   ||||||||
Sbjct: 87  atgaatctag-------tgtctagattcattaacatctaagtgaatgtgagcaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           || | |||||||||||||||||||| ||||
Sbjct: 34  aaagtcttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
           Japonica Group
          Length = 136

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 52/53 (98%)
 Strand = Plus / Minus

                                                                
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 133 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 81



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           ||||||||||||||| ||   || ||||| ||| |||||||||||||||||| |||||||
Sbjct: 77  tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18

                         
Query: 143 aacggagggagtac 156
           ||||||||||||||
Sbjct: 17  aacggagggagtac 4



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 84  tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132




>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
           Japonica Group
          Length = 119

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | | ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57

                    
Query: 65  aatgaatct 73
           |||||||||
Sbjct: 56  aatgaatct 48



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||| | | || ||||| ||| |||||||||||||||||||||| |||
Sbjct: 43  tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 103 aacggaggaagta 115



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||
Sbjct: 41  atgctagaatgacttacattgtgaaacggagggagta 5



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 6  tacttcctccgtttcacaatgtaattcattctagcat 42
          |||| ||||||||||||||||||| ||||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcat 41




>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
           Group
          Length = 102

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 89/102 (87%), Gaps = 4/102 (3%)
 Strand = Plus / Minus

                                                                       
Query: 32  cattctagcatttcccacattcatatagttgttaatgaatctggacgtattta----tct 87
           ||||||| |||||||||||||||||||| ||||||||||||| ||  ||| ||    |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43

                                                     
Query: 88  agattcattaacaactatgtgaatatggaaaatgctagaatg 129
           ||||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 42  agattcattaacacctatatgaatgtggaaaatgctagaatg 1



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 88/102 (86%), Gaps = 4/102 (3%)
 Strand = Plus / Plus

                                                                       
Query: 32  cattctagcatttcccacattcatatagttgttaatgaatctggac----gtatttatct 87
           ||||||||||||| |||||||||||||| ||||||||||||| |||     ||| |||||
Sbjct: 1   cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60

                                                     
Query: 88  agattcattaacaactatgtgaatatggaaaatgctagaatg 129
           ||||||||||||| |||| ||||| ||| ||||| |||||||
Sbjct: 61  agattcattaacacctatatgaatgtgggaaatgttagaatg 102




>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
          Indica Group
          Length = 104

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          ||||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64

               
Query: 66 atgaa 70
          |||||
Sbjct: 65 atgaa 69



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91  ttcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagg 150
           |||||||||| | || ||||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct: 69  ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10

                
Query: 151 gagta 155
            ||||
Sbjct: 9   aagta 5



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 124 agaatgacttacattgtgaaacggagggagta 155
           |||||||||| |||||||||||| ||||||||
Sbjct: 69  agaatgacttgcattgtgaaacgaagggagta 100




>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
           Indica Group
          Length = 133

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70

                   
Query: 66  atgaatct 73
           ||| ||||
Sbjct: 69  atggatct 62



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||| |||||||| | || ||||| ||| |||||||||||||||||||||| |||||
Sbjct: 59  tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 119 cggaggaagta 129



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 130 acttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||
Sbjct: 30  acttacattgtgaaacggagggagta 5




>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
          Length = 126

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||| ||||||| || |||||||||| ||||||||||||||| |||||
Sbjct: 5  tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| ||||| |||  |||||||||| |||||||||| |||||
Sbjct: 75  tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16

                       
Query: 145 cggagggagtac 156
           |||||| |||||
Sbjct: 15  cggaggaagtac 4



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||| | |||||||| ||||||||||||||||
Sbjct: 85  aatgctagaaagtcttacattatgaaacggagggagta 122




>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
          Japonica Group
          Length = 147

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 86  ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
           |||||||||||| || | || ||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 74  ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15

                     
Query: 146 ggagggagta 155
           ||||| ||||
Sbjct: 14  ggaggaagta 5




>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
           Group
          Length = 147

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||||||||||||||| | || ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 83  atgaatct 76



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 86  ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
           |||||||||||| || | || ||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 74  ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133

                     
Query: 146 ggagggagta 155
           ||||| ||||
Sbjct: 134 ggaggaagta 143




>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
          Length = 136

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| |||||||||||| |||||||||||||| | |||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 72  atgaatct 65



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  tgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| | || ||||| ||| | |||||||||||||||| |||||||||||
Sbjct: 64  tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123

                    
Query: 147 gagggagta 155
           |||| ||||
Sbjct: 124 gaggaagta 132




>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
           Japonica Group
          Length = 130

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63



 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| | || ||||| ||| ||||||||||||||||||||||||||||| 
Sbjct: 62  tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 122 gagggagta 130



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          ||||||||| |||||||||| ||| ||||| |||||||| |||||||||||| | |||||
Sbjct: 1  tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60

            
Query: 66 at 67
          ||
Sbjct: 61 at 62




>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
           Japonica Group
          Length = 131

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | |||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 67  atgaatct 60



 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || ||||| ||  |||||||||||||||||| |||||||
Sbjct: 55  tatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtga 114

                         
Query: 143 aacggagggagtac 156
           |||||||| |||||
Sbjct: 115 aacggaggaagtac 128



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||||||||||||| |||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggaggaagtac 4



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttc 45
          |||||||||||||||||||||||| |||||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttc 44




>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 121/146 (82%), Gaps = 4/146 (2%)
 Strand = Plus / Minus

                                                                       
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
           ||||||||||||||||||| ||||||||||||||| ||||||||||| | ||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94

                                                                       
Query: 71  tctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatgctaga 126
           ||| ||| ||    | | ||||||||||   |   | || ||||| ||  | ||||||||
Sbjct: 93  tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34

                                     
Query: 127 atgacttacattgtgaaacggaggga 152
           ||||||||||||||||||||||||||
Sbjct: 33  atgacttacattgtgaaacggaggga 8



 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 121/146 (82%), Gaps = 4/146 (2%)
 Strand = Plus / Plus

                                                                       
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
           ||||||||||||||||||| |||||||||||| || ||||||||||| |   |   ||||
Sbjct: 10  cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69

                                                                       
Query: 71  tctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatgctaga 126
           ||| ||| ||  |||    ||||||||||| ||| | || ||||| ||  ||||||||||
Sbjct: 70  tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129

                                     
Query: 127 atgacttacattgtgaaacggaggga 152
           ||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155




>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
           Group
          Length = 140

 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 123/151 (81%), Gaps = 18/151 (11%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||||||| ||| |||||||||||||||||||||||||||       
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatat------- 85

                                                                       
Query: 65  aatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgcta 124
             |||         |||||||||| ||| ||||| | | || | ||| ||||||||||||
Sbjct: 84  --tga---------tatttatctaaatttattaatatcaatataaatgtggaaaatgcta 36

                                          
Query: 125 gaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||
Sbjct: 35  gaatgacttacattgtgaaacggagggagta 5



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||||||| |||||||||||||| ||||||| ||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcattttccacatttatat 56



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 88  tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136




>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 132/160 (82%), Gaps = 4/160 (2%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| |||||||||||||||||||  | ||||| |||| ||||||||||||||| ||
Sbjct: 161 ttatactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatg 102

                                                                       
Query: 63  ttaatgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaa 118
            |||||||||| |||     ||| ||| |||||| |||| || |||| ||||| |||  |
Sbjct: 101 ctaatgaatctagacattattatatatatagatttattagcatctatatgaatgtgggta 42

                                                   
Query: 119 atgctagaatgacttacattgtgaaacggagggagtacgt 158
           |||||| || | |||||||| ||||||||||| |||||||
Sbjct: 41  atgctataaagtcttacattatgaaacggaggaagtacgt 2



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 126/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| |||||||  | || ||||||| ||||||||||||||| || ||
Sbjct: 5   tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64

                                                                       
Query: 66  atgaatctggacgtatt----tatctagattcattaacaactatgtgaatatggaaaatg 121
           || |||||  |  |||     | ||||||||||||| || |||| ||||| |||  ||||
Sbjct: 65  ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            ||||| | |||||||||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158




>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
          Indica Group
          Length = 99

 Score = 93.7 bits (47), Expect = 7e-19
 Identities = 50/51 (98%)
 Strand = Plus / Minus

                                                             
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcata 56
          |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                    
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtacg 157
           ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacagagggagtacg 3



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 47  tgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttc 45
          |||| |||| |||||||||||||| |||||||||||||||
Sbjct: 5  tactccctctgtttcacaatgtaagtcattctagcatttc 44




>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
           Indica Group
          Length = 127

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 82  ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
           ||||||||||||||||||| | || ||||| | | |||||||||||||||||||||| ||
Sbjct: 50  ttatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatg 109

                         
Query: 142 aaacggagggagta 155
           ||||||||||||||
Sbjct: 110 aaacggagggagta 123



 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| |||||||||||||||| |||||||||| | |||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 63  atgaatct 56



 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                          
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 51  aatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 5  atacttcctccgtttcacaatgtaattcattctagcattt 44
          ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4  atacttcctccgtttcacaatgtaagtcattctagcattt 43




>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
           Indica Group
          Length = 136

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||||| ||||| ||||||| ||||||||||||| | ||||||||||||| |||
Sbjct: 134 tatacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgt 75

                     
Query: 64  taatgaatct 73
           ||||||||||
Sbjct: 74  taatgaatct 65



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| ||||| ||   ||||||||||||||||||||| |||||
Sbjct: 62  tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121

                      
Query: 145 cggagggagta 155
            ||||| ||||
Sbjct: 122 tggaggaagta 132



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||| ||||||||||||||||
Sbjct: 42  aatgctagaatgacttacattatgaaacggagggagta 5



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                 
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||||| ||||||||||| ||||||| ||||||||||||| || | |||||||||
Sbjct: 3  tatactccctccgtttcataatgtaagtcattctagcattacctatattcatata 57




>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
           Japonica Group
          Length = 130

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| |||||||||||||||| |||||||||| | | |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67

                 
Query: 66  atgaat 71
           ||||||
Sbjct: 66  atgaat 61



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                               
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatata 57



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggagggagtac 4



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||| ||||
Sbjct: 88  aaatgctagaatgacttacattgtgaaacggaggaagta 126




>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
           Japonica Group
          Length = 110

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 92/107 (85%), Gaps = 4/107 (3%)
 Strand = Plus / Minus

                                                                       
Query: 31  tcattctagcatttcccacattcatatagttgttaatgaatctggac----gtatttatc 86
           ||||||||||||||||||||||||||| | ||||||||||||| |||     ||| ||||
Sbjct: 107 tcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatc 48

                                                          
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
           |||||||||||||| | || ||||| ||  |||||||||||||||||
Sbjct: 47  tagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 90/107 (84%), Gaps = 4/107 (3%)
 Strand = Plus / Plus

                                                                       
Query: 31  tcattctagcatttcccacattcatatagttgttaatgaatc----tggacgtatttatc 86
           ||||||||||||||| ||||||||||| | ||||||||||||    | ||  ||| | ||
Sbjct: 4   tcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtc 63

                                                          
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
           |||||||||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 64  tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110




>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
          Length = 139

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 82  ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
           ||||||||||||||||||| | || ||||| ||| ||||| |||||||||||| ||||||
Sbjct: 62  ttatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtg 121

                         
Query: 142 aaacggagggagta 155
           ||||||||||||||
Sbjct: 122 aaacggagggagta 135



 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||| ||| |||||||| |||||||||||||||||| | |||
Sbjct: 137 tatactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgt 78

                     
Query: 64  taatgaatct 73
           ||||||||||
Sbjct: 77  taatgaatct 68



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 5  tacttcctccgtttcacaatataagtcattctagcattttccacattcatat 56




>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
           Group
          Length = 134

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || ||||| ||||||||| |||| |||||||||| ||||
Sbjct: 58  tatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtga 117

                        
Query: 143 aacggagggagta 155
           |||||||||||||
Sbjct: 118 aacggagggagta 130



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||| |||||| ||| |||| ||||| |||||||||||| | |||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||  |||||||| | |||||| |||||||||||||||||||||
Sbjct: 53  tgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                 
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||||| |||||||||||||||| || ||| | ||||||||| || |||||||||
Sbjct: 3  tatactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatata 57




>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
          Length = 140

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 88  tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136




>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
           Japonica Group
          Length = 132

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
           ||||||||| | || ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 68  tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9

                
Query: 152 agtac 156
           |||||
Sbjct: 8   agtac 4



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| ||||| |||||||| |||||||||||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64

              
Query: 66 atga 69
          ||||
Sbjct: 65 atga 68



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatat 77



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| |||||||||||| ||| | |||||||||||||||||||||||||
Sbjct: 80  tgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagtac 129




>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
          Japonica Group
          Length = 134

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                      
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
          ||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||| | ||||
Sbjct: 4  atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63

                   
Query: 65 aatgaatct 73
          |||||||||
Sbjct: 64 aatgaatct 72



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                       
Query: 79  tatttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacatt 138
           ||||| |||||||||||||||| | || ||||| ||  |||| |||||||||||||||||
Sbjct: 81  tatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacatt 22

                            
Query: 139 gtgaaacggagggagta 155
            ||||||||||| ||||
Sbjct: 21  atgaaacggaggaagta 5



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatat 79



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||| ||||| ||||||||||
Sbjct: 92  aaatgctagaatgacttacattatgaaatggagggagta 130




>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
           Japonica Group
          Length = 135

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 83  tgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53  tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 3  tatactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56




>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 127/154 (82%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| |||| ||  | |||||||||| ||||||||||| ||| |||||
Sbjct: 5   tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64

                                                                       
Query: 66  atgaatctggac----gtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  ||     ||| | |||||||||||||||| ||||| | | || |  ||||
Sbjct: 65  atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            ||||| | |||||||||||||||||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||  ||||| |||  |||||||||| | ||| |||| |||||||
Sbjct: 73  tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14

                     
Query: 147 gagggagtac 156
           |||| |||||
Sbjct: 13  gaggaagtac 4




>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
           Indica Group
          Length = 141

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat 86



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 89  tgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 61/69 (88%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcat-tctagcatttcccacattcatatagttgtt 64
          |||| ||||||||||||||||||| ||   |||| |||||||||||||||||| | ||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64

                   
Query: 65 aatgaatct 73
          |||||||||
Sbjct: 65 aatgaatct 73




>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
           Indica Group
          Length = 120

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                           
Query: 108 gaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 52  gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5



 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                       
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  tggaaaatgctagaatgacttacattgtgaaacggagggagtac 117



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
           |||| ||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                          
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattc 53
          |||| |||||||||||||||| || |||||||||||||| ||| ||||
Sbjct: 5  tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52




>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
           Indica Group
          Length = 139

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||||||||||||| ||||||||||| | || ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 75  atgaatct 68



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| |||| ||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 5  tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatat 56



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 88  agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
           |||||||||| || | || ||||| ||  |||||||||||||||||| ||||||||||||
Sbjct: 68  agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127

                   
Query: 148 agggagta 155
           ||| ||||
Sbjct: 128 aggaagta 135



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 43  aaatgctagaatgacttacatcgtgaaacagagggagta 5




>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
           Indica Group
          Length = 123

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                     
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacgga 148
           ||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 53  tgaatatgggaaatgctagaatgacttatattgtgaaacgga 12



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| ||| |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 71  tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                       
Query: 13 tccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatat 56




>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
          Length = 139

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| |||||||||||||||||||||||| || | | |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 75  atgaatct 68



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 88  agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
           ||||||||||| | | |||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 68  agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127

                   
Query: 148 agggagta 155
           ||| ||||
Sbjct: 128 aggaagta 135



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| ||  |||||||||||||||||| ||||||||||||||||||||
Sbjct: 56  atgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                           
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
          |||| ||||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 5  tactccctccgtttcacaatataagtcattctagcatttcacacattca 53




>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
           Group
          Length = 138

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| ||||||||||||||| |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75

                   
Query: 66  atgaatct 73
           || |||||
Sbjct: 74  ataaatct 67



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||| ||||||| |||| ||||| |||  |||||||||| | ||||||||||||||
Sbjct: 64  tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 124 cggaggaagta 134



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| | |||||| | |||||||||||||||||
Sbjct: 42  aatgctagaaagtcttacaatatgaaacggagggagtac 4




>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
          Indica Group
          Length = 125

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatat 56



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||||||| ||| |||||||||||||||||||||| |||  | |||
Sbjct: 123 tatactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgt 64

                  
Query: 64  taatgaa 70
           |||||||
Sbjct: 63  taatgaa 57



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| ||||||||||||||||||||
Sbjct: 83  aaatgctagaatgacttagattgtgaaacggagggagta 121



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| ||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 53  tgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
          Length = 115

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||| ||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggaggaagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| ||||||||||||||||||||||||||||
Sbjct: 75  atgctagattgacttacattgtgaaacggagggagta 111



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 6   tacttcctccgtttcacaatgtaattcattctagcat 42
           |||| ||||||||||||||||||| ||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75




>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
           Indica Group
          Length = 136

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||| || | || | ||||||| |||||||| |||||||||||||||| ||
Sbjct: 75  tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 15  cggagggagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                      
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
          ||||| |||||||| |||||||||| ||||| |||||||||||| ||| |||| | || |
Sbjct: 4  atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63

                   
Query: 65 aatgaatct 73
          |||||||||
Sbjct: 64 aatgaatct 72



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| ||||||||||||| |||||||||||||||||||| ||||
Sbjct: 84  tgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132




>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
           Japonica Group
          Length = 118

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| ||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttatattgtgaaacggagggagta 5



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 50/54 (92%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 3  tatactccctccgtttcacaatataagtcattctagcattt-ccacattcatat 55



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||| ||||||||||||||| ||||
Sbjct: 66  tgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114




>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
           Group
          Length = 141

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||| ||||||| |||| ||||| |||| ||||||||||| ||||||||| |||||
Sbjct: 67  tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 127 cggagggagta 137



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||| ||||||| | |||||||||||  |||||||||||||| ||
Sbjct: 140 ttatactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatg 81

                      
Query: 63  ttaatgaatct 73
           ||||| |||||
Sbjct: 80  ttaataaatct 70



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
          |||||||||||||||| ||||||| | ||||||||||| |||||||||| ||||
Sbjct: 5  tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatag 58



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||| |||  ||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 58  ctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
           Group
          Length = 140

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||| || | || ||||||||| |||| ||||||||||||||||| |||||
Sbjct: 66  tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 126 cggagggagta 136



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||| |||||||| |||||||| | || ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 76  atgaatct 69



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||||||| | ||||||| ||||| || ||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatat 56



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||  |||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 53  tgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
           Group
          Length = 144

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||| ||||||| |||| ||||| |||| |||||||||| | ||||||||||||||
Sbjct: 70  tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 130 cggagggagta 140



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | ||||||||||  |||||||||||||| |||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81

                   
Query: 66  atgaatct 73
           || |||||
Sbjct: 80  ataaatct 73



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 102 ctatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||| |||||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 58  ctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5




>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
           Japonica Group
          Length = 136

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| |||| |||||| ||||||| ||||||||||||| ||||||| ||||||| ||||
Sbjct: 133 atactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtt 74

                          
Query: 65  aatgaatctggacgt 79
           ||||||||| |||||
Sbjct: 73  aatgaatctagacgt 59



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| || || |||  ||||||||||||| ||||||| |||||
Sbjct: 62  tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121

                      
Query: 145 cggagggagta 155
           | |||||||||
Sbjct: 122 cagagggagta 132



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
          |||||||||||||||| ||||||| ||||||||||||| |||| || |||||||
Sbjct: 5  tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatag 58



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||| ||||||||||| ||||
Sbjct: 42  aatgctagaatgacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
           Japonica Group
          Length = 143

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  tggaaaatgctagaatgacttacattgtgaaacggagggagta 139



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| |||||||||||||| ||||| | |||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80

                   
Query: 66  atgaatct 73
           || |||||
Sbjct: 79  ataaatct 72



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                     
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagtacg 157
           ||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 44  aaaatgctaaaatgacttacattgtgaaatggagggagtacg 3



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 6  tacttcctccgtttcacaatgtaattcattctagcattt 44
          |||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 5  tactccctccatttcacaatgtaagtcattttagcattt 43




>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
          Japonica Group
          Length = 153

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                 
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 3  tatactccctccgtttcacaatgtaagtcattctagcatttcccacatttatata 57



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                           
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
           ||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 150 atactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggagggagta 5



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagta 149



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                       
Query: 14 ccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatata 54



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 117 aaatgctagaatgacttacattgtgaaacgg 147
           |||||||||||||||||||||||||||||||
Sbjct: 68  aaatgctagaatgacttacattgtgaaacgg 98




>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
           rice)
          Length = 130

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| | || | | | |||||||||||||||| |||||||||||||||||
Sbjct: 73  tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14

                     
Query: 147 gagggagtac 156
           ||||||||||
Sbjct: 13  gagggagtac 4



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| | |||||||||||| ||||| | |||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 127 atgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||
Sbjct: 98  atgacttacattgtgaaacggagggagta 126




>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
          Japonica Group
          Length = 133

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                      
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
          ||||||||||||||||||||||||||  | ||||||||||  |||||||||| ||| |||
Sbjct: 3  tatacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgt 62

                    
Query: 64 taatgaatct 73
          ||||||||||
Sbjct: 63 taatgaatct 72



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||  ||||| |||| |||||||||| | ||||||||||||||
Sbjct: 75  tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 15  cggaggaagta 5




>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
           Japonica Group
          Length = 151

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| | || ||||| ||  |||| ||| |||||||||||||||||||
Sbjct: 77  tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136

                         
Query: 145 cggagggagtacgt 158
           ||||||||||||||
Sbjct: 137 cggagggagtacgt 150



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||||||| ||||| ||| ||||| ||||||||||| | |||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 87  atgaatct 80




>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 127/155 (81%), Gaps = 4/155 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | || ||| ||| ||  ||||||| ||| |||||
Sbjct: 5   tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  || ||| |||    ||||||| ||||||| |||  || || |||  ||||
Sbjct: 65  atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124

                                              
Query: 122 ctagaatgacttacattgtgaaacggagggagtac 156
           |||||| | ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||||||||||||||  | |||||||||| ||||||| ||| ||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99

                   
Query: 66  atgaatct 73
           || |||||
Sbjct: 98  ataaatct 91




>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
          Japonica Group
          Length = 120

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 3  tatactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 53  tgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 50/53 (94%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                
Query: 6   tacttcctccgttt-cacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatat 64



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||| ||| |||||||||||||||||| |||||||||
Sbjct: 67  tgaatgtgggaaatgctagaatgacttatattgtgaaa 104




>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
          Japonica Group
          Length = 146

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                      
Query: 3  ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
          ||||||| ||||||||||| |||||||  | |||||||||| ||||||||||||||| ||
Sbjct: 2  ttatactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61

                   
Query: 63 ttaatgaat 71
          |||||||||
Sbjct: 62 ttaatgaat 70



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||| ||||||||||| |||| ||||| |||  |||||||||| | |||||||| |||||
Sbjct: 75  tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 15  cggagggagta 5



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
           |||| ||||||||||| |||||||  | |||||||||| |||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 89



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| | |||||||| |||||||||||||||||
Sbjct: 105 aatgctagaaagtcttacattatgaaacggagggagtac 143




>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
           Japonica Group
          Length = 129

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53  tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5



 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77  tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 4  atactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatat 74




>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
           Japonica Group
          Length = 130

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||| | | || ||||||||  |||||||||||||||||||||| |||||||
Sbjct: 58  tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 118 gagggagta 126



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||| ||| |||||||||||||| ||||||| ||||
Sbjct: 5  tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 56



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| | | |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 66  atgaatct 59



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 47  tggaaaatgctagaatgacttatattgtgaaacggaggaagta 5




>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 126/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||||||| |||||| ||| |||||||| |||||| || |||||||| | || ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99

                                                                       
Query: 66  atgaatctggacgtatttatctag----attcattaacaactatgtgaatatggaaaatg 121
           ||||||||  || ||| ||||||     |||||||| || | || |||||||||||||| 
Sbjct: 98  atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||| | |||| |||||||| ||||
Sbjct: 38  ctagaatgacttatactgtggaacggaggaagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           ||||||||||| || | || ||||||||  ||||| |||||||||||| |||||| ||||
Sbjct: 90  tagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacg 149

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 150 gagggagta 158




>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
          Group
          Length = 143

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                   
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagtt 61
          ||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||
Sbjct: 4  atacttcctccgtttcacaatgtaagtcattctagtattttccacattcatagagtt 60



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||||||| ||||| | ||| |||||| ||||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 79  atgaatct 72




>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
          Japonica Group
          Length = 136

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                   
Query: 2  cttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatata 58
          ||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1  cttatactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatata 57



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||| || | || |||||| ||||||||||| ||||||||| |||||||||
Sbjct: 62  tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121

                 
Query: 145 cggagg 150
           ||||||
Sbjct: 122 cggagg 127



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 7   acttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaa 66
           ||||||||||||||||||| ||| ||||| |||||||| ||  |||||||| | || |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72

                  
Query: 67  tgaatct 73
           |||||||
Sbjct: 71  tgaatct 65



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 117 aaatgctagaatgacttacattgtgaaac 145
           |||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaac 15




>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
           Group
          Length = 129

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 53  tgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 77  tgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 4  atactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatat 74




>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
           Group
          Length = 140

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           |||||||||||||||||||||| || ||||| |||||||||||| |||||||| | ||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78

                    
Query: 65  aatgaatct 73
           ||| |||||
Sbjct: 77  aataaatct 69



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||| ||||||| | || ||||||||| |||||||| |||||||| ||||||||||
Sbjct: 66  tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 126 cggaggaagta 136



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                           
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
          |||||||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||| ||| |||| ||||||| ||||||||||||||||||||| |||||
Sbjct: 56  atgtgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4




>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
           Group
          Length = 99

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggagggagtac 4



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                        
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
          |||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||||||||||||||||
Sbjct: 58  aatgctagaatgatttacattgtgaaacggagggagta 95



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                 
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatt 43
          ||||| ||||||||||||||||||| |||||||||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58




>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
           Group
          Length = 162

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | |||||||||| | ||||| ||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 98  atgaatct 91



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 124/154 (80%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||| |||||||||  | || ||  ||| || |||||||| ||| |||||
Sbjct: 5   tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||| | ||| ||| ||    | |||||||||||||| |||| || || ||   ||||
Sbjct: 65  atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158




>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
           Group
          Length = 108

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggagggagtac 4



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccac 49
          |||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccac 48



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 118 aatgctagaatgacttacattgtgaaacgga 148
           ||||||||||||||||| |||||||||||||
Sbjct: 67  aatgctagaatgacttatattgtgaaacgga 97



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatt 43
           |||||| ||||||||||||| ||| |||||||||||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67




>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
          Length = 111

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggagggagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccaca 50
           |||| ||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||| ||||||||| ||||||||||||||
Sbjct: 69  aaatgctagaatgatttacattgtaaaacggagggagta 107




>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
           Indica Group
          Length = 113

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatat 58



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||||||||||
Sbjct: 34  aatgacttacattgtgaaacggagggagtac 4



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 61  tgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 6  tacttcctccgtttcacaatgtaattcatt 35
          |||| ||||||||||||||||||| |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcatt 34




>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
           Indica Group
          Length = 136

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| ||||| |||| |||||||||| | |||||||| |||||
Sbjct: 62  tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121

                       
Query: 145 cggagggagtac 156
           | ||||||||||
Sbjct: 122 cagagggagtac 133



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||| |||||||  | ||||||||||  |||||||||||||| |||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 72  atgaatct 65



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                 
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
          ||||||||||| ||||| |||||||  | ||||||||||  ||||||||||||||
Sbjct: 4  atacttcctccttttcataatgtaagactttctagcattgtccacattcatatag 58




>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
          Indica Group
          Length = 98

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                          
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
          ||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 3  tatacttcctccgttccacaatgtaagtcattctagcatttcccacat 50



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 60  gctagaatgacttacattgtgaaacggagggagtac 95



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| |||||||| ||||
Sbjct: 43  aaatgctagaatgacttacattgtggaacggaggaagta 5



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 6  tacttcctccgtttcacaatgtaattcattctagc 40
          |||| ||||||||||||||||||| ||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60




>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
          Length = 148

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 122/151 (80%), Gaps = 10/151 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||||||| ||||||||||||||  ||||||||||  | |||||
Sbjct: 5   tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           ||           ||| |||||||||| ||||||| |  | ||||| ||| |||| ||||
Sbjct: 65  at----------atatatatctagatttattaacatcactatgaatgtgggaaatactag 114

                                          
Query: 126 aatgacttacattgtgaaacggagggagtac 156
           ||||||||||||| |||||| ||||||||||
Sbjct: 115 aatgacttacattatgaaacagagggagtac 145



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 121/150 (80%), Gaps = 10/150 (6%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||| ||||||| ||||||||| ||||||||||||||||  | |||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85

                                                                       
Query: 66  atgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatgctag 125
           || ||||| ||  ||| |||        ||||||| |  | ||||| || ||||||||||
Sbjct: 84  ataaatctaga--tatatat--------attaacatcactatgaatgtgaaaaatgctag 35

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||| ||||||||||| ||||
Sbjct: 34  aatgacttacattatgaaacggaggaagta 5




>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
           Japonica Group
          Length = 135

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||||||||||||||||||| ||||||||||||||  ||| || |||| | |||
Sbjct: 133 tatacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgt 74

                   
Query: 64  taatgaat 71
           ||||||||
Sbjct: 73  taatgaat 66



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 115 gaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 45  gaaaatgctaaaatgacttacattgtgaaacggagggagtac 4



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 92  aaaatgctagaatgacttacattgtgaaacggaggaagta 131



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 6  tacttcctccgtttcacaatgtaattcattctagcattt 44
          |||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattttagcattt 43




>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
          Japonica Group
          Length = 105

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatat 56



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||| ||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggaggaagta 5



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||| |||||| ||||||
Sbjct: 64  aatgctagaatgacttacattgtggaacggaaggagta 101



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 13 tccgtttcacaatgtaattcattctagcatt 43
          |||||| |||||||||| |||||||||||||
Sbjct: 94 tccgttccacaatgtaagtcattctagcatt 64




>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
           Group
          Length = 134

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||| ||| ||||| ||| |||| |||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| | || ||||| |||||||| ||| ||||||||| |||||||||||
Sbjct: 62  tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121

                    
Query: 147 gagggagta 155
           |||| ||||
Sbjct: 122 gaggaagta 130



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||| | | ||||||||||||||||||||||||||||||
Sbjct: 53  tgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||| ||||||||||||||||||| ||||| | | |||| ||||||||||||
Sbjct: 4  atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatat 56




>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
           Indica Group
          Length = 144

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | |||||||||| ||||||||||||||| |||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 80  atgaatct 73



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| ||||| |||  |||||||||| | |||||||| |||||||
Sbjct: 72  tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131

                     
Query: 147 gagggagtac 156
           ||||||||||
Sbjct: 132 gagggagtac 141




>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
           Group
          Length = 143

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| ||| ||| |||||||| ||||| |||||||||||| | |||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 79  atgaatct 72



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| | || ||||| ||||||||| |||||||||||| ||| |||||
Sbjct: 69  tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 129 cggaggaagta 139



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44  aaaatgctagaatgacttacattatgaaacggagggagta 5



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 6  tacttcctccgtttcacaatgtaattcattctagcattt 44
          |||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 5  tactccctccgtttcataatgtaagtcattctagcattt 43




>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
          Japonica Group
          Length = 134

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 53  tgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || ||||| || |||||| ||||||| |||||||| |||
Sbjct: 58  tatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatga 117

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 118 aacggaggaagta 130



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| |||||||  ||||||| |||||  ||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63




>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
          Indica Group
          Length = 142

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                         
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56



 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatat 87



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
           ||||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggaggga 8



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
           ||||||||||||||||||||||||||||||||||||
Sbjct: 100 aaatgctagaatgacttacattgtgaaacggaggga 135




>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
           Group
          Length = 141

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| | |||||||| |||||||||| | |||||||| |||||
Sbjct: 67  tctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaa 126

                      
Query: 145 cggagggagta 155
           ||||| |||||
Sbjct: 127 cggagagagta 137



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 12  ctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaat 71
           |||||||||| |||||||  | ||||||||||  ||| ||| |||||| |||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72

             
Query: 72  ct 73
           ||
Sbjct: 71  ct 70




>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
           Indica Group
          Length = 162

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 127/156 (81%), Gaps = 4/156 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           ||||||||||| |||||| |||||||  | ||||||| || |||||||| |||||| |  
Sbjct: 3   tatacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatac 62

                                                                       
Query: 64  taatgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaa 119
           |||||||||| ||| ||| | |    |||||||||||| ||  ||| ||||| |||  ||
Sbjct: 63  taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122

                                               
Query: 120 tgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| | |||||||| ||||||||||||||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| |||||||  | |||||||||| ||||||||||||||  || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 98  atgaatct 91




>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
           Japonica Group
          Length = 108

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 58  aatatgaaaaatgctagaatgatttacattgtgaaacggagggagta 104



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 5   atacttcctccgtttcacaatgtaattcattctagcattt 44
           ||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 105 atactccctccgtttcacaatgtaaatcattctagcattt 66



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 44  aaaatactagaatgacttatattgtgaaacgaagggagtac 4




>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                      
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66  tggaaaatgctagaatgacttacattgtgaaacggaggaagta 108



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccaca 50
           ||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccaca 64



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||| |||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctaaaatgacttacattgtgaaacggagggagtac 4



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                            
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
          |||| ||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54




>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
           Group
          Length = 116

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 115 gaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 45  gaaaatgctagaatgacttacattgtgaaacggaggaagtac 4



 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||||||||||||  ||||| ||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63

                
Query: 66 atgaat 71
          ||||||
Sbjct: 64 atgaat 69



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 115 gaaaatgctagaatgacttacattgtgaaacggaggg 151
           |||||||||||||||||||||||||||||||||||||
Sbjct: 72  gaaaatgctagaatgacttacattgtgaaacggaggg 108



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 11  cctccgtttcacaatgtaattcattctagcattt 44
           ||||||||||||||||||| ||||||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt 74




>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
           Indica Group
          Length = 135

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 86  ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
           |||||||||||| || | || ||||  || |||||| |||||||||||||||||||||||
Sbjct: 62  ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121

                     
Query: 146 ggagggagta 155
           ||||||||||
Sbjct: 122 ggagggagta 131



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||||||||||| |||||||| |||||  ||| ||||||| | || |
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73

                    
Query: 65  aatgaatct 73
           |||||||||
Sbjct: 72  aatgaatct 64



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 117 aaatgctagaatgacttacattgtgaaacggaggga 152
           ||||| |||||||||||| |||||||||||||||||
Sbjct: 43  aaatgatagaatgacttatattgtgaaacggaggga 8



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                         
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||||||||||||| ||| |||||||| |||||| || ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56




>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
           Japonica Group
          Length = 90

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 40  catttcccacattcatatagttgttaatgaatctggacgtatttatctagattcattaac 99
           |||| ||||||||||||||  ||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 5   cattgcccacattcatatatatgttaatgaatctagacatatatatctagattcattaac 64

                                     
Query: 100 aactatgtgaatatggaaaatgctag 125
           |  ||| ||||| |||  ||||||||
Sbjct: 65  atatatatgaatgtgggcaatgctag 90



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 36  ctagcatttcccacattcatatagttgttaatgaatctggacgtatttatctagattcat 95
           |||||||| ||||||||||||||  ||||||||||||| ||  ||| | |||||||||||
Sbjct: 90  ctagcattgcccacattcatatatatgttaatgaatctagatatatatgtctagattcat 31

                
Query: 96  taaca 100
           |||||
Sbjct: 30  taaca 26




>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
           Group
          Length = 130

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttc 45
           |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 128 tatacttcctccgtttcacaatgtaagtcattctagcatttc 87



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 104 atgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| ||| |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 56  atgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||| ||||
Sbjct: 88  aaatgctagaatgacttacattgtgaaacggaggaagta 126



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                           
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattca 54
          |||| ||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct: 5  tactccctccgtttcacaatataagttattctagcatttcccacattca 53




>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
          Indica Group
          Length = 164

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                      
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
          |||||||||||||||||| | | |||  | |||||||||| ||||||||||||||| |||
Sbjct: 3  tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62

                    
Query: 64 taatgaatct 73
          ||||||||||
Sbjct: 63 taatgaatct 72



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 127/158 (80%), Gaps = 6/158 (3%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||| ||||||||||| | | |||  | |||||||||| ||||||||||||||| |||
Sbjct: 162 tatactccctccgtttcatattataagactttctagcattgcccacattcatatagatgt 103

                                                                       
Query: 64  taatgaatct------ggacgtatttatctagattcattaacaactatgtgaatatggaa 117
           ||||||||||        || ||| ||| |||||||||||||| |||| ||||| |||  
Sbjct: 102 taatgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggc 43

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||| | |||| | | ||||||||||| ||||
Sbjct: 42  aatgctagaaagtcttataatatgaaacggaggaagta 5




>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
          Japonica Group
          Length = 118

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                            
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
          |||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 5  tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||| |||||||||||||||||||||||||
Sbjct: 43  aaatgctagaatgagttacattgtgaaacggagggagtac 4



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||  |||| ||||||| || ||||| ||||||||||||||||||||| | || 
Sbjct: 116 tatacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgc 57

                   
Query: 64  taatgaat 71
           ||||||||
Sbjct: 56  taatgaat 49




>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
           Japonica Group
          Length = 163

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 130/159 (81%), Gaps = 5/159 (3%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||| | | |||  | |||||||||| ||||||||||||||| ||
Sbjct: 2   ttatactccctccgtttcatattataagactttctagcattacccacattcatatagatg 61

                                                                       
Query: 63  ttaa-tgaatctggacgt----atttatctagattcattaacaactatgtgaatatggaa 117
           |||| | ||||| |||      || |||||||||||||||||| |||| ||||| |||  
Sbjct: 62  ttaaattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggc 121

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| | |||| | | |||||||||||||||||
Sbjct: 122 aatgctagaaagtcttataatctgaaacggagggagtac 160



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 105/127 (82%), Gaps = 5/127 (3%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctggacgtattta----tctag 89
           |||||||||| ||||||||||||||| ||||||||||||| ||  ||| ||    |||||
Sbjct: 131 ttctagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctag 72

                                                                       
Query: 90  attca-ttaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgga 148
           ||| | |||||| |||| ||||| |||  |||||||||| | |||| | | |||||||||
Sbjct: 71  attaatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacgga 12

                  
Query: 149 gggagta 155
           |||||||
Sbjct: 11  gggagta 5




>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
           Group
          Length = 160

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 126/154 (81%), Gaps = 6/154 (3%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  | || |||||||  ||||||| || ||| | |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97

                                                                       
Query: 66  atgaatctggacgtatttat----ctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||  ||| |||    ||||||||||||||| |||| |  || |||| ||||
Sbjct: 96  atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
            ||||| | |||||||| ||||||||||||||||
Sbjct: 38  gtagaaagtcttacattatgaaacggagggagta 5



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 126/155 (81%), Gaps = 6/155 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||| ||||||||||| |||||||  | ||||| ||||  ||||||  |||||| ||||
Sbjct: 4   atactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtt 61

                                                                       
Query: 65  aatgaatctgga--cgta--tttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| ||  | ||  | |||||||||||||||| | |||  | ||| |||| |||
Sbjct: 62  aatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaat 121

                                              
Query: 121 gctagaatgacttacattgtgaaacggagggagta 155
           |||| || | |||||||||||||||||||| ||||
Sbjct: 122 gctaaaaagtcttacattgtgaaacggaggaagta 156




>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
          Indica Group
          Length = 114

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||||||| ||||| ||| |||| |||||||||||| | |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64

            
Query: 66 at 67
          ||
Sbjct: 65 at 66



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 94  attaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggagggag 153
           ||||||| | || ||||| |||||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 66  attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7

             
Query: 154 ta 155
           ||
Sbjct: 6   ta 5



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           |||| |||||||||||||||||||||||||
Sbjct: 81  aatggcttacattgtgaaacggagggagta 110




>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
           Japonica Group
          Length = 130

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||||||||||| | | |||  | |||||||||| ||||||||||||||| |||
Sbjct: 128 tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 69

                     
Query: 64  taatgaatct 73
           ||||||||||
Sbjct: 68  taatgaatct 59



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||||| |||| ||||| |||  |||||||||| | |||| | | |||||
Sbjct: 56  tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 116 cggaggaagta 126




>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
           Indica Group
          Length = 110

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 82  ttatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtg 141
           ||||||||||||||||  | | || | |||||| ||||||||| ||||| ||||||||||
Sbjct: 33  ttatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtg 92

                            
Query: 142 aaacggagggagtacgt 158
           ||| |||||||||||||
Sbjct: 93  aaatggagggagtacgt 109



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 5  atacttcctccgtttcacaatgtaattcatt 35
          ||||||||||||||||||||||||| |||||
Sbjct: 4  atacttcctccgtttcacaatgtaagtcatt 34



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||| ||||
Sbjct: 34  aatgacttacattgtgaaacggaggaagta 5



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 6   tacttcctccgtttcacaatgtaattcattctagcattt 44
           |||| ||||| ||||||||||||| ||||| ||||||||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcattt 68




>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
           Group
          Length = 144

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 84  atctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaa 143
           |||||||||||||| || |||| |||||||||  |||||||||| | |||| ||| ||||
Sbjct: 69  atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128

                        
Query: 144 acggagggagtac 156
           |||||||||||||
Sbjct: 129 acggagggagtac 141



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 84  atctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaa 143
           ||||||||||||||||| |||| ||||||||   |||||||||| |||||| ||| ||||
Sbjct: 76  atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaa 17

                       
Query: 144 acggagggagta 155
           || |||| ||||
Sbjct: 16  acagaggaagta 5



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          ||||||||| |||||| ||| ||| || |||||||||| | || |||||||||| |||||
Sbjct: 5  tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||| ||| |||  | |||||||||| |||| |||||||||| || ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 80  atgaatct 73




>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
           Japonica Group
          Length = 146

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
           ||||||| ||||||||||| |||||||  | || ||||||| ||||||||||||||| ||
Sbjct: 145 ttatactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatg 86

                    
Query: 63  ttaatgaat 71
           |||||||||
Sbjct: 85  ttaatgaat 77



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
          |||| ||||||||||| |||||||  | |||||||||| |||||||||||||||
Sbjct: 5  tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 58



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||| | |||||||| |||||||||||||||||
Sbjct: 42  aatgctagaaagtcttacattatgaaacggagggagtac 4



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||| ||||||||||| |||| ||||| |||  ||||||| || |  ||||||| |||||
Sbjct: 72  tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 132 cggagggagta 142




>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
          Indica Group
          Length = 143

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                      
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
          ||||||||||||||||||||||||| ||||| ||||||||| || ||| |||| | || |
Sbjct: 4  atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63

                   
Query: 65 aatgaatct 73
          |||||||||
Sbjct: 64 aatgaatct 72



 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 91  tgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||| || | || | ||||||  |||||||| |||||||||||||||||||
Sbjct: 75  tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16

                      
Query: 145 cggagggagta 155
           |||||| ||||
Sbjct: 15  cggaggaagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||| ||||||||||||||| ||| ||||| |||||||| ||||||||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatat 88




>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
           Group
          Length = 134

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || || |  || ||||||||| |||||||||||||||||
Sbjct: 58  tatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtga 117

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 118 aacggaggaagta 130



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||| ||||||||  ||| | ||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||| ||| ||||||||||||||| |||||||||||||||
Sbjct: 43  aaatactaaaatgacttacattgttaaacggagggagtac 4



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||| ||||||||| ||||| ||| |||||||||||| ||||
Sbjct: 5  tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56




>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
           (African rice)
          Length = 162

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 125/154 (81%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| | | |||  | |||||||||| ||||||||||||||| || ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||    | ||| |||||||||| |||| ||| | |||  ||||
Sbjct: 98  atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||| | | ||||||||||||||||
Sbjct: 38  ctagaaagtcttataatatgaaacggagggagta 5



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                      
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
          ||||| ||||||||||| | | |||  | |||||||||| |||||| |||||||| ||||
Sbjct: 4  atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63

                
Query: 65 aatgaa 70
          ||||||
Sbjct: 64 aatgaa 69




>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
          Length = 147

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                               
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||
Sbjct: 4  atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatat 56



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||| ||||||||||||||||||||||||||||||||||
Sbjct: 43  aaatactagaatgacttacattgtgaaacggagggagta 5



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||| || ||||||||||||| |||||| |||||||||
Sbjct: 104 aaaatgttaaaatgacttacattatgaaacagagggagta 143




>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score = 73.8 bits (37), Expect = 6e-13
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           |||||||||||||||||| | || |  |  || |||||||||||||||||||||||||||
Sbjct: 58  tatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtga 117

                        
Query: 143 aacggagggagta 155
           |||||||| ||||
Sbjct: 118 aacggaggaagta 130



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||||||||||| ||||||||||||||  ||| |  |||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 70  atgaatct 63



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||| ||||||||||||||||||| |||||||||||||||
Sbjct: 43  aaatactagaatgacttacattgttaaacggagggagtac 4



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||| ||||||||| ||||||||| ||||| |||||||||||
Sbjct: 5  tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56




>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
          Indica Group
          Length = 127

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||| ||||||| ||||| ||||| || |||||||||||| | |||||
Sbjct: 5  tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64

              
Query: 66 atga 69
          ||||
Sbjct: 65 atga 68



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| |||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatat 72



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 75  tgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
           ||||||||| | || ||||| |||||| ||||| ||||||||||||| ||||||||||| 
Sbjct: 68  tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9

               
Query: 152 agta 155
           ||||
Sbjct: 8   agta 5




>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
           Japonica Group
          Length = 126

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||| |||||||||||||||||||||||||||||||
Sbjct: 43  aaatgctaaaatgacttacattgtgaaacggagggagtac 4



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           |||||||||||||||||||||| ||| ||||| ||||||||| || ||| |||| | |||
Sbjct: 124 tatacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgt 65

              
Query: 64  taa 66
           |||
Sbjct: 64  taa 62



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||||||| ||||| ||||||||| || ||| |||| | |||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64

           
Query: 66 a 66
          |
Sbjct: 65 a 65



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| ||||||||| ||||||||||||||| ||||
Sbjct: 84  aaatgctaaaatgacttatattgtgaaacggaggaagta 122




>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
           Group
          Length = 140

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||||||||||||||||||| | ||| ||| |||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatat 89



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||||||||||| | ||| ||  ||||| |||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatat 56



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 92  tgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 130 acttacattgtgaaacggagggagta 155
           ||||||||||||||||||||| ||||
Sbjct: 30  acttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
           Indica Group
          Length = 134

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||||||||||   |||| |||||| ||||||||| ||||||||| |||||||||
Sbjct: 75  tctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaa 16

               
Query: 145 cgga 148
           ||||
Sbjct: 15  cgga 12



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                   
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcattt 44
          |||||||| ||||||||||||| ||| ||||| ||||||||
Sbjct: 3  tatacttcttccgtttcacaatataagtcattttagcattt 43



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggaggg 151
           ||||| || |||||| || ||||||||| ||||||||||||||||
Sbjct: 82  tgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||| ||| ||||| || |||||  |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79




>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
           Group
          Length = 142

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatat 87



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
          ||||||||||| |||||| ||| ||| |||||||||||||| |||||||||||  | || 
Sbjct: 3  tatacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgc 62

                    
Query: 64 taatgaatct 73
          ||||||||||
Sbjct: 63 taatgaatct 72



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           ||||||||||||||| || |  | ||||| |||||||||||||||||||||| ||| |||
Sbjct: 77  tatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatga 18

                        
Query: 143 aacggagggagta 155
           ||| |||| ||||
Sbjct: 17  aacagaggaagta 5



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| ||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 90  tgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138




>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
          Indica Group
          Length = 164

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| |||| ||||||||||||||  | |||||||||| ||||||||||| ||| |||||
Sbjct: 5  tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||  ||||| |||  |||||||||| | ||||||||||||||| 
Sbjct: 73  tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 13  gagggagta 5




>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
           Group
          Length = 112

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||| |||||| |||| ||||| |||| |||||||||| | |||||||| |||||
Sbjct: 38  tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97

                   
Query: 145 cggaggga 152
           ||||||||
Sbjct: 98  cggaggga 105



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
           ||||||||||| |||||||  | ||||||||||  |||||||||||||| |||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44

              
Query: 71  tct 73
           |||
Sbjct: 43  tct 41




>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
           Japonica Group
          Length = 89

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 108 gaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||| |||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 52  gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                          
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattc 53
          |||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52




>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
           Japonica Group
          Length = 95

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||||||||||||||||||||||||||||| |||||
Sbjct: 43  aaatgctagaatgacttacattgtgaaacggaggaagtac 4



 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                  
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttc 45
          |||||||||||||||||||||||| |||||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagtcattctagcatttc 44




>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
           Japonica Group
          Length = 141

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||| ||||||| |||||||||| |||| |||||||||| | |||| | | |||||
Sbjct: 75  tctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaa 16

                       
Query: 145 cggagggagtac 156
           ||||||||||||
Sbjct: 15  cggagggagtac 4



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           ||||||||||||||||| | | |||  | ||||||||||  |||||||||||||| ||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79




>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
           Group
          Length = 140

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| ||||||||||||||| |||  | |||||||||| ||||||| ||||||| |||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77

                   
Query: 66  atgaatct 73
           ||||||||
Sbjct: 76  atgaatct 69



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| || || |||  |||||||||| | |||| |||||||||||
Sbjct: 68  tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 128 gagggagta 136




>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
          Japonica Group
          Length = 140

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||||||| |||  | |||||||||| ||||||| ||||||| |||||
Sbjct: 5  tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| || || |||  |||||||||| | |||| |||||||||||
Sbjct: 73  tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 13  gagggagta 5




>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
           Indica Group
          Length = 112

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           ||||||||| |||||| |||| |||||||||  |||||||||| | |||||||| |||||
Sbjct: 75  tctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaa 16

                   
Query: 145 cggaggga 152
           ||||||||
Sbjct: 15  cggaggga 8



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
          ||||||||||| |||||||  | ||||||||||  ||| |||||||||| |||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69

             
Query: 71 tct 73
          |||
Sbjct: 70 tct 72




>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
          Indica Group
          Length = 93

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                         
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacatt 52
          ||||| |||||||||||||||||| |||||||||||||||| |||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttcctacatt 43



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 117 aaatgctagaatgacttacattgtgaaacggag 149
           |||||||||||||||||||||||||||||||||
Sbjct: 51  aaatgctagaatgacttacattgtgaaacggag 83



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 5  atacttcctccgtttcacaatgtaattcattctag 39
          ||||||||||||||||||||||||| |||||||||
Sbjct: 4  atacttcctccgtttcacaatgtaagtcattctag 38



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||||||||||||||||||||| ||||
Sbjct: 38  ctagaatgacttacattgtgaaacggaggaagta 5




>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
           Japonica Group
          Length = 132

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||| ||||||||||||||||
Sbjct: 90  aaatgctagaatgacttacattatgaaacggagggagta 128



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
           |||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83




>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
          Length = 150

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 47  tggaaaatgctagaatgacttatattatgaaacggagggagta 5



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||| ||||||| ||||||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagta 146



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                       
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccac 49
          ||||| ||||||||||| ||| ||| |||||||||||||| ||||
Sbjct: 4  atactccctccgtttcataatataagtcattctagcattttccac 48



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttc 45
           |||| ||| ||||||| ||||||| |||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttc 107




>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
           Group
          Length = 162

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 126/156 (80%), Gaps = 4/156 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   atacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtt 64
           |||||||||| |||||| |||||||  | ||||||| || ||||||||||||||  ||||
Sbjct: 4   atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63

                                                                       
Query: 65  aatgaatctgg----acgtatttatctagattcattaacaactatgtgaatatggaaaat 120
           ||||||||| |    || ||| | | |||||||||| | | |||| ||||| |||  |||
Sbjct: 64  aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaat 123

                                               
Query: 121 gctagaatgacttacattgtgaaacggagggagtac 156
           |||| || | |||||||| |||||| ||||||||||
Sbjct: 124 gctaaaaagtcttacattatgaaaccgagggagtac 159



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 122/154 (79%), Gaps = 4/154 (2%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||| |||| |||||| |||||||  | || ||||||| ||||||||||||||| | | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99

                                                                       
Query: 66  atgaatctggacgta----tttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||||  || ||    | | ||||||||||||||||  ||| ||||| |||  || |
Sbjct: 98  atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||||||| |||||| |||| ||||
Sbjct: 38  ctagaaagtcttacattatgaaaccgaggaagta 5




>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
           Group
          Length = 140

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||||||| | |||| || ||||||  |||  |||||||||||||||| |||||
Sbjct: 75  tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 15  cggagggagta 5



 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
           |||||||||||||||| ||||||| |||||||||||||  | ||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatag 83



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 118 aatgctagaatgacttacattgtgaaacggagggagtac 156
           ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 99  aatgctagaatgacttacattatgaaacggaggaagtac 137



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||| ||||||||||| ||||||| ||||||||  ||| |||| || ||||||| | |||
Sbjct: 5  tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72




>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
           Group
          Length = 143

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 47  tggaaaatactagaatgacttacattatgaaacggagggagta 5



 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 93  aatatggaaaatgctagaatgacttatattatgaaatggagggagta 139



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                         
Query: 5  atacttcctccgtttcacaatgtaattcattctagcatttcccacat 51
          ||||| ||||||||||| ||||||| ||||||||| |||| ||||||
Sbjct: 4  atactccctccgtttcataatgtaagtcattctagtattttccacat 50




>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
           Group
          Length = 142

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 85  tctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaa 144
           |||||||||| ||||| | ||  |||| ||||||||| |||||||||||||||| | |||
Sbjct: 68  tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127

                      
Query: 145 cggagggagta 155
           |||||||||||
Sbjct: 128 cggagggagta 138



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||| ||||||| |||||||| |||||| |||||||||||
Sbjct: 5  tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 43  aaatgttagaatgacttacattatgaaacggagggagta 5




>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
           Group
          Length = 130

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||||||| |||||||||||||||||  | |||||||||| |||||||||||||
Sbjct: 128 tatacttcatccgtttcacaatgtaagactttctagcattgcccacattcatat 75



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 118 aatgctagaatgacttacattgtgaaacgga 148
           |||||||||| | ||||||||||||||||||
Sbjct: 89  aatgctagaaagtcttacattgtgaaacgga 119




>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
           Japonica Group
          Length = 141

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||||||||||||||||||  |||| ||||||| | || || ||||||| |||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78

                 
Query: 66  atgaat 71
           ||||||
Sbjct: 77  atgaat 72



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||||| |||| || |||||   ||||||| |||| |||||||||||||||||||
Sbjct: 72  attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131

                  
Query: 150 ggagtac 156
           | |||||
Sbjct: 132 gaagtac 138




>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
           Indica Group
          Length = 143

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
           ||||||||||||||||||||||||||  | |||||||| || |||||||||| ||| |||
Sbjct: 141 tatacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgt 83

                     
Query: 64  taatgaatct 73
           || |||||||
Sbjct: 82  tattgaatct 73



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||| | |||||||||||||||||||| ||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagta 139



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatt 43
          |||||||||||||||||||||| |||  | ||||||||||
Sbjct: 3  tatacttcctccgtttcacaatctaagcctttctagcatt 42



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||| | |||| ||||||||||||||| ||||
Sbjct: 42  aatgctagaaaggcttagattgtgaaacggaggaagta 5




>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
          Japonica Group
          Length = 138

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgt 63
          |||||||||||||||||| | | |||  | |||||||||| ||||||||||||||| |||
Sbjct: 3  tatacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgt 62

                    
Query: 64 taatgaatct 73
          ||| ||||||
Sbjct: 63 taacgaatct 72



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 86  ctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaac 145
           |||||||| |||||| |||| ||||| |||  |||||||||| | |||| | | ||||||
Sbjct: 74  ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15

                     
Query: 146 ggagggagta 155
           ||||| ||||
Sbjct: 14  ggaggaagta 5




>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
          Length = 118

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           ||||||||| ||||||||||||||  | ||||||| || ||||||||||||||| | |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55

                 
Query: 66  atgaat 71
           ||||||
Sbjct: 54  atgaat 49



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||| | |||| ||||| |||  || ||||||| | ||||||||||||||| |||
Sbjct: 49  attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108

                 
Query: 150 ggagta 155
           | ||||
Sbjct: 109 gaagta 114




>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
          Japonica Group
          Length = 141

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          ||||||||||||||||||||||||  |||| ||||||| | || || ||||||| |||||
Sbjct: 5  tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64

                
Query: 66 atgaat 71
          ||||||
Sbjct: 65 atgaat 70



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||||||||| |||| || |||||   ||||||| |||| |||||||||||||||||||
Sbjct: 70  attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11

                  
Query: 150 ggagtac 156
           | |||||
Sbjct: 10  gaagtac 4




>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
          Japonica Group
          Length = 97

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                
Query: 4  tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||||||||||||||| ||||| ||| ||||||||||||||| |||||| ||||
Sbjct: 95 tatacttcctccgttttacaatataagtcattctagcatttctcacatttatat 42



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 55  aaatgctagaatgacttatattgtaaaacggaggaagta 93



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 126 aatgacttacattgtgaaacggagggagta 155
           ||||||||| |||||||||||||| |||||
Sbjct: 34  aatgacttatattgtgaaacggagagagta 5




>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
          Indica Group
          Length = 124

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
          ||||||||||||||||||||||||  | ||||||| || |||||||||||||||
Sbjct: 5  tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatag 58



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatag 59
           |||| |||||||||||||||||||    |||||||||| |||||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatag 67



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 121 gctagaatgacttacattgtgaaacggagggagtacgt 158
           ||||||| | |||||||||||||||||||| |||||||
Sbjct: 39  gctagaaagtcttacattgtgaaacggaggaagtacgt 2



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 118 aatgctagaatgacttacattgtgaaacggagggagta 155
           ||||||||||   |||||||||||||||||||||||||
Sbjct: 83  aatgctagaaactcttacattgtgaaacggagggagta 120




>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
           Group
          Length = 132

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 83  tatctagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtga 142
           ||||||||||||||| || | || | ||||||  |||| ||||||||||||| |||||||
Sbjct: 77  tatctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtga 18

                         
Query: 143 aacggagggagtac 156
           |||||||| |||||
Sbjct: 17  aacggaggaagtac 4



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                      
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
          |||||||||||||||||||| ||| ||||||||| ||||| || ||| |||| | || ||
Sbjct: 5  tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64

                  
Query: 66 atgaatct 73
          ||||||||
Sbjct: 65 atgaatct 72



 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 117 aaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 90  aaatgctacaatgacttacattatgaaacggagggagtac 129



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttc 45
           |||| ||||||||||| ||||||| ||||| |||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89




>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
           Group
          Length = 112

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                            
Query: 123 tagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||||||||||||||||||
Sbjct: 37  tagaatgacttacattgtgaaacggagggagta 5



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 4   tatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           ||||||||||||||||||||||| || ||||||||| ||||  |||||| ||||
Sbjct: 110 tatacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatat 57



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 116 aaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 69  aaaatactagaatgacttgcattgtgaaacggaggaagta 108



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 6  tacttcctccgtttcacaatgtaattcattcta 38
          |||| ||||||||||||||||||| ||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattcta 37




>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
           Group
          Length = 120

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| || ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 53  tgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 107 tgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 155
           ||||| || ||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 68  tgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                              
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
          |||| ||||||||||||||||||| ||||| ||| ||||  |||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatat 56



 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatat 57
           |||| ||||| ||||| ||||||| ||||||||| ||||  |||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatat 65




>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
           Japonica Group
          Length = 162

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 124/154 (80%), Gaps = 4/154 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgtta 65
           |||||||||||||||| | | |||  | ||||| |||| ||||||||||||||  ||| |
Sbjct: 5   tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64

                                                                       
Query: 66  atgaatctggacgtattta----tctagattcattaacaactatgtgaatatggaaaatg 121
           |||||||| ||| ||| ||    | |||||||||| ||| |||| |||| ||||| ||| 
Sbjct: 65  atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124

                                             
Query: 122 ctagaatgacttacattgtgaaacggagggagta 155
           |||||| | |||| | | ||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158




>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
           Group
          Length = 142

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| ||||||  || |||  ||||||||||   ||||||||||||||||
Sbjct: 73  tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14

                    
Query: 147 gagggagta 155
           |||||||||
Sbjct: 13  gagggagta 5



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                      
Query: 3  ttatacttcctccgtttcacaatgtaattcattctagcatttcccacattcatatagttg 62
          ||||||| |||||||||||||||||||    |||||||||| |||||||  | |||| ||
Sbjct: 2  ttatactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatg 61

                     
Query: 63 ttaatgaatct 73
          |||||||||||
Sbjct: 62 ttaatgaatct 72



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 6   tacttcctccgtttcacaatgtaattcattctagcatttcccacattcat 55
           ||||||||||||| |||||| |||  | |||||||||| | |||||||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactcacattcat 89




>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
           Japonica Group
          Length = 123

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 31  tcattctagcatttcccacattcatatagttgttaatgaatctggacgtatttatctaga 90
           ||||||||||||||||||||||||||| | |||||||| |||| ||   || ||||||||
Sbjct: 120 tcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatctaga 61

                    
Query: 91  ttcattaac 99
           | |||||||
Sbjct: 60  tacattaac 52



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                     
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatct 73
          ||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 4  tcattctagcatttcccacattcatattgatgttaatgtatct 46



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 62  gttaatgaatctggacgtatttatctagattcattaacaactatgtgaatatggaaaatg 121
           ||||||| |||| ||  ||| ||||||||| |||||||| | || ||||| ||| |||||
Sbjct: 52  gttaatgtatctagatatatctatctagatacattaacatcaatatgaatgtgggaaatg 111

                       
Query: 122 ctagaatgactt 133
           ||||||||||||
Sbjct: 112 ctagaatgactt 123



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 84  atctagattcattaacaactatgtgaatatggaaaatgctagaatgactt 133
           |||||||| |||||||| | || ||||| ||| |||||||||||||||||
Sbjct: 50  atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1




>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
          Japonica Group
          Length = 90

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                       
Query: 28 aattcattctagcatttcccacattcatatagttgttaatgaatc 72
          |||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 90 aattcattctagcatttcccacattcatattgatgctaatgaatc 46



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                    
Query: 31 tcattctagcatttcccacattcatatagttgttaatgaatc 72
          ||||||||||||||||||||||||||| | || |||||||||
Sbjct: 4  tcattctagcatttcccacattcatattgatgctaatgaatc 45




>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
           Japonica Group
          Length = 114

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 82/98 (83%), Gaps = 4/98 (4%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
           |||||||||| ||||||||||||||| ||||||||||||| |    || ||  | |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           |||||||||||  ||| ||||| |||| ||||||||||
Sbjct: 46  attcattaacatatatatgaatgtggacaatgctagaa 9



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 82/98 (83%), Gaps = 4/98 (4%)
 Strand = Plus / Plus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctggac--gtatttat--ctag 89
           ||||||||||  |||||||||||||  ||||||||||||| |||  |||| | |  ||||
Sbjct: 9   ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           ||||||||||| |||| ||||| |||  ||||||||||
Sbjct: 69  attcattaacatctatatgaatgtgggcaatgctagaa 106




>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
           Group
          Length = 114

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 82/98 (83%), Gaps = 4/98 (4%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctggacgtatttat----ctag 89
           |||||||||| ||||||||||||||| ||||||||||||| | | ||| | |    ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           |||||||||||  ||| |||||||||  ||||||||||
Sbjct: 46  attcattaacatatatatgaatatgggcaatgctagaa 9



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 80/98 (81%), Gaps = 4/98 (4%)
 Strand = Plus / Plus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
           |||||||||| |||| |||||||||  ||||||||||||| |    || ||| |  ||||
Sbjct: 9   ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           ||||||||||| |||| ||||| |||  ||||||||||
Sbjct: 69  attcattaacatctatatgaatgtgggcaatgctagaa 106




>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
           Group
          Length = 114

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 82/98 (83%), Gaps = 4/98 (4%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctgg----acgtatttatctag 89
           |||||||||| ||||||||||||||| ||||||||||||| |    |  ||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           |||||||||||  ||| ||||| |||  ||||||||||
Sbjct: 46  attcattaacatatatatgaatgtgggcaatgctagaa 9



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 82/98 (83%), Gaps = 4/98 (4%)
 Strand = Plus / Plus

                                                                       
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatctggacgtatttat----ctag 89
           |||||||||| ||||||||||||||  ||||||||||||| ||  ||| |||    ||||
Sbjct: 9   ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68

                                                 
Query: 90  attcattaacaactatgtgaatatggaaaatgctagaa 127
           ||||||||||| |||| ||||| |||  ||||||||||
Sbjct: 69  attcattaacatctatatgaatgtgggcaatgctagaa 106




>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
           Group
          Length = 93

 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 109 aatatggaaaatgctagaatgacttacattgtgaaacggag 149
           ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 43  aatatagaaaatgctagaatgacttatattgtgaaacggag 83



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 5  atacttcctccgtttcacaatgtaattcattctagcat 42
          ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 4  atacttcctccgtttcacagtgtaagtcattctagcat 41



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 119 atgctagaatgacttacattgtgaaacggagggagta 155
           |||||||||||||||||| ||||||||||||| ||||
Sbjct: 41  atgctagaatgacttacactgtgaaacggaggaagta 5



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                 
Query: 6  tacttcctccgtttcacaatgtaattcattctagcattt 44
          ||||| |||||||||||||| ||| ||||||||||||||
Sbjct: 89 tacttactccgtttcacaatataagtcattctagcattt 51




>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
           Indica Group
          Length = 136

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatct 73
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatct 65



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| ||||| |||  |||||||||| | |||| | | |||||| 
Sbjct: 64  tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123

                     
Query: 147 gagggagtac 156
           |||| |||||
Sbjct: 124 gaggaagtac 133




>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
           Indica Group
          Length = 123

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 113 tggaaaatgctagaatgacttacattgtgaaacggagggagtac 156
           |||| |||||||||| | ||||||||||||||||||||||||||
Sbjct: 47  tggacaatgctagaaagccttacattgtgaaacggagggagtac 4



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 88  agattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacgg 147
           ||||||||||||| |||  | ||| |||| ||| |||||| | |||||||||||||||||
Sbjct: 51  agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110

                
Query: 148 aggga 152
           |||||
Sbjct: 111 aggga 115



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 11  cctccgtttcacaatgtaattcattctagcatttcccacattcatatagttgttaatgaa 70
           |||||||||||||||||||  | |||||| |||  ||||||| || ||| ||||||||||
Sbjct: 113 cctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatgaa 54

               
Query: 71  tctg 74
           ||||
Sbjct: 53  tctg 50



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 6  tacttcctccgtttcacaatgtaattcattctagcatt 43
          |||| |||||||||||||||||||  | ||||||||||
Sbjct: 5  tactccctccgtttcacaatgtaaggctttctagcatt 42




>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
           Group
          Length = 136

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 34  ttctagcatttcccacattcatatagttgttaatgaatct 73
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 104 ttctagcattgcccacattcatatagatgttaatgaatct 65



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 87  tagattcattaacaactatgtgaatatggaaaatgctagaatgacttacattgtgaaacg 146
           |||||||||||||| |||| ||||| |||  |||||||||| | |||| | | |||||| 
Sbjct: 64  tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123

                     
Query: 147 gagggagtac 156
           |||| |||||
Sbjct: 124 gaggaagtac 133