miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01061;mir-548;CABD01142179.1/4659-4576 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 71.9 bits (36), Expect = 1e-12
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| ||||||||||| |||| ||| | ||||||||| |||| ||||||| |||| ||
Sbjct: 1 tattaggttggtgcaaaagtaagtgctgtttttgccattaaaagtcatggcaaaaataac 60
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||||||||||||||
Sbjct: 61 aattacttttgcaccaacctaata 84
>RF01061;mir-548;AC104441.2/115021-115102 9606:Homo sapiens
(human)
Length = 82
Score = 69.9 bits (35), Expect = 6e-12
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactcatggccaaaaccaca 68
||||| ||||||||| | |||||||| | |||||| |||||| | ||||| ||||||||
Sbjct: 1 tattaggttggtgcagaagtaattgcggtttttgctataaaagt-atggcataaaccaca 59
Query: 69 attacttatgcaccaacctaata 91
||||||| |||||||||||||||
Sbjct: 60 attacttctgcaccaacctaata 82
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||| ||||||||| |||||||||||||||
Sbjct: 32 aaaaccgcaattacttctgcaccaacctaata 1
>RF01061;mir-548;ABBV01001495.1/1250-1333 447454:candidate
division TM7 single-cell isolate TM7a
Length = 84
Score = 69.9 bits (35), Expect = 6e-12
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 10 attaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccaca 68
|||| ||||||||| | |||||||||| ||||||||| |||| | ||||| ||| || ||
Sbjct: 2 attaggttggtgcataagtaattgcagtttttgccattaaaagtaatggcaaaacccgca 61
Query: 69 attacttatgcaccaacctaata 91
||||||| |||||||||||||||
Sbjct: 62 attacttgtgcaccaacctaata 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccac 67
||||| ||||||||| | |||||||| ||||||||||| | | | |||| ||||| |
Sbjct: 84 tattaggttggtgcacaagtaattgcgggttttgccattacttttaatggcaaaaactgc 25
Query: 68 aattacttatgcaccaacctaat 90
|||||||||||||||||||||||
Sbjct: 24 aattacttatgcaccaacctaat 2
>RF01061;mir-548;ABGA01354861.1/8138-8055 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 52 tcatggccaaaaccacaattacttatgcaccaacctaata 91
||||||| |||||||||||||||| |||||||||||||||
Sbjct: 40 tcatggcaaaaaccacaattacttttgcaccaacctaata 1
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| ||||||||||| ||||||| | ||||||||| |||| |||||| |||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgtggtttttgccatgaaaagtcatggtaaaaaccgc 60
Query: 68 aattacttatgcaccaacctaata 91
|| || || ||||||||| |||||
Sbjct: 61 aactatttttgcaccaacgtaata 84
>RF01061;mir-548;AC090451.6/112413-112496 9606:Homo sapiens
(human)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| ||||||||||| || ||||||| ||||||||| |||| | | || ||||||||
Sbjct: 84 tattaggttggtgcaaaagtgattgcagtttttgccattaaaagtaacagcaaaaaccac 25
Query: 68 aattacttatgcaccaacctaata 91
||| |||| |||||||||||||||
Sbjct: 24 aatcacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01009254.1/6580-6663 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 56 ggccaaaaccacaattacttatgcaccaacctaata 91
|||||||||||||||||||| |||||||||||||||
Sbjct: 36 ggccaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01022860.2/18560-18643 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccac 67
||||| ||||||||||| | |||||||| ||||||||| | | ||| || | ||||||||
Sbjct: 84 tattaggttggtgcaaaagcaattgcagtttttgccattacaatcaatgacaaaaaccac 25
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||| ||||||||||
Sbjct: 24 aattacttttgcagcaacctaata 1
>RF01061;mir-548;AC068058.12/13722-13805 9606:Homo sapiens (human)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| |||||||| || ||||| | ||||||||| | |||||| ||||| ||| ||||
Sbjct: 1 tattaggttggtgcgaaagtaatggtgggttttgcctttaaaactaatggcaaaacccac 60
Query: 68 aattacttatgcaccaacctaat 90
|||||||| ||||||||||||||
Sbjct: 61 aattacttttgcaccaacctaat 83
>RF01061;mir-548;AC117179.4/116901-116818 9606:Homo sapiens
(human)
Length = 84
Score = 61.9 bits (31), Expect = 1e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 15 gttggtgcaaacgtaattgcaggttttgccata-aaactcatggccaaaaccacaattac 73
|||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||||||
Sbjct: 78 gttggtgcaaacgtaattgcgatttttgccattgaaagtaatggcaaaaaccacaattac 19
Query: 74 ttatgcaccaaccta 88
| ||||||||||||
Sbjct: 18 gtttgcaccaaccta 4
>RF01061;mir-548;AACZ02147953.1/7033-7116 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AADC01054028.1/147-64 9606:Homo sapiens (human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| ||||||||||| | ||| | || ||||||||| |||| | ||||| |||| |||
Sbjct: 84 tattaggttggtgcaaaagcaatcgtagtttttgccattaaaagtaatggcaaaaagcac 25
Query: 68 aattacttatgcaccaacctaa 89
|||||||| |||||||||||||
Sbjct: 24 aattacttttgcaccaacctaa 3
>RF01061;mir-548;ABSL01062835.1/19063-18980 9606:Homo sapiens
(human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AC099678.2/65387-65470 9606:Homo sapiens (human)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttgtgcaccaacctaata 1
>RF01061;mir-548;AANU01290519.1/8633-8716 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| |||||||||||||||
Sbjct: 38 atggcgaaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AANU01115116.1/14393-14310 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcaggttttgccat 38
>RF01061;mir-548;AADC01117423.1/979850-979767 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccacaattac 73
||||||||||| |||||||| | |||||||| ||||| | || || ||||||||||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttttgccattaaaagtaattgcaaaaaccacaattac 66
Query: 74 ttatgcaccaacc 86
|| | ||||||||
Sbjct: 67 ttttacaccaacc 79
>RF01061;mir-548;AADD01036043.1/27192-27275 9606:Homo sapiens
(human)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 55 tggccaaaaccacaattacttatgcaccaacctaata 91
||||||||||| ||||||||| |||||||||||||||
Sbjct: 48 tggccaaaaccgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01296214.1/2804-2721 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 58.0 bits (29), Expect = 2e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 20 tgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccacaattacttatg 78
|||||| |||||||||| ||||||||| |||| | ||| | ||| || ||||||||| ||
Sbjct: 73 tgcaaaagtaattgcagtttttgccattaaaagtaatgtcaaaacccgcaattacttttg 14
Query: 79 caccaacctaata 91
|||||||||||||
Sbjct: 13 caccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttg 42
||||| ||||||||||| |||||||| |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcgggttttg 34
>RF01061;mir-548;AACZ02112099.1/25061-25144 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||||||||||||| |||||||||||||||
Sbjct: 32 aaaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02117558.1/10764-10847 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactc-atggccaaaaccac 67
||||| ||||||||||| ||||| |||||||||||||| | || ||| | ||| ||||
Sbjct: 84 tattaggttggtgcaaatgtaatggcaggttttgccattattttcaatgacaaaatccac 25
Query: 68 aattacttatgcaccaacctaata 91
|||||| | |||||||||||||||
Sbjct: 24 aattacatttgcaccaacctaata 1
>RF01061;mir-548;AADB02011926.1/1109567-1109484 9606:Homo sapiens
(human)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccac 67
||||| ||||||||||| |||||||| ||||| || ||| | ||||||| |||||| |
Sbjct: 1 tattaggttggtgcaaaagtaattgcgttttttgtcaataacagtcatggcaaaaaccgc 60
Query: 68 aattacttatgcaccaacctaata 91
| |||||| |||||||||||||||
Sbjct: 61 agttacttttgcaccaacctaata 84
>RF01061;mir-548;AC117444.6/85961-86044 9606:Homo sapiens (human)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccac 67
||||| ||||||||||| |||||||| | ||||||||| | ||| |||| |||| |||
Sbjct: 84 tattaggttggtgcaaaagtaattgcggtttttgccattgcattcagtggcgaaaatcac 25
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||||||||| ||||
Sbjct: 24 aattacttttgcaccaacccaata 1
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||| ||||||||| |||||||||||||||
Sbjct: 47 atggcaaaaaccgcaattacttttgcaccaacctaata 84
>RF01061;mir-548;CABD01214541.1/743-661 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 83
Score = 56.0 bits (28), Expect = 9e-08
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| ||||||||||| || ||||||| ||||||||| |||| | ||||||||||| |
Sbjct: 1 tattaggttggtgcaaaagtcattgcag-ttttgccatcaaaagtaatggccaaaactgc 59
Query: 68 aattacttatgcaccaacctaata 91
||| |||| |||||| ||||||||
Sbjct: 60 aatgacttttgcacccacctaata 83
>RF01061;mir-548;CABD01007255.1/6013-6096 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccac 67
||||||||||||||||| |||||| | | |||||| || | | | | |||| ||||||||
Sbjct: 84 tattaagttggtgcaaaagtaattacggtttttgctattatatttaatggcaaaaaccac 25
Query: 68 aattacttatgcaccaacctaata 91
|||||||| ||||||| |||||||
Sbjct: 24 aattacttttgcaccagcctaata 1
>RF01061;mir-548;AANU01124258.1/9508-9425 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 56.0 bits (28), Expect = 9e-08
Identities = 71/84 (84%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgcc-ataaaactcatggccaaaaccac 67
||||| ||||||||||| ||||||| | | ||||| |||||| | ||||| ||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccac 60
Query: 68 aattacttatgcaccaacctaata 91
|||| ||| |||||||| ||||||
Sbjct: 61 aatttcttttgcaccaaactaata 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 62 aaccacaattacttatgcaccaacctaata 91
|||||||||||||| |||||||||||||||
Sbjct: 30 aaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AL008721.1/97595-97678 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccacaattac 73
||||||||||| |||||||||| |||||||| ||||| | ||||| ||||| ||| | |
Sbjct: 7 gttggtgcaaaagtaattgcagcttttgccattaaaagtaatggcaaaaactgcaaattc 66
Query: 74 ttatgcaccaaccta 88
|| ||||||||||||
Sbjct: 67 ttttgcaccaaccta 81
>RF01061;mir-548;AADD01165731.1/6332-6415 9606:Homo sapiens
(human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 aaaccacaattacttatgcaccaacctaata 91
||||||||||||||| |||||||||||||||
Sbjct: 31 aaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AC121493.1/11246-11329 9606:Homo sapiens (human)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 aaaccacaattacttatgcaccaacctaata 91
||||||||||||||| |||||||||||||||
Sbjct: 54 aaaccacaattacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01261834.1/7167-7084 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 aaaccacaattacttatgcaccaacctaata 91
||||||||||||||| |||||||||||||||
Sbjct: 31 aaaccacaattacttttgcaccaacctaata 1
>RF01061;mir-548;AACZ02061421.1/862-945 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| |||||| ||||||||
Sbjct: 47 atggcaaaaaccacaattacttttgcaccgacctaata 84
>RF01061;mir-548;AADB02037333.1/77827-77910 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||||||||||| |||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacaatcacttttgcaccaacctaata 1
>RF01061;mir-548;AC011709.11/112131-112214 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccacaattac 73
||||||||||| ||||| || | ||||||||| |||| | || || ||||||||| ||||
Sbjct: 7 gttggtgcaaatgtaatggcggtttttgccattaaaagtaattgcaaaaaccacagttac 66
Query: 74 ttatgcaccaacctaata 91
| |||||||||||||||
Sbjct: 67 atttgcaccaacctaata 84
>RF01061;mir-548;AADB02016093.1/179805-179888 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccataaaactc-atggccaaaaccacaattac 73
||||||||||| ||||| || ||||||||||| | ||| ||||| |||||| |||||
Sbjct: 7 gttggtgcaaaagtaatcgcgggttttgccattatgctcaatggcaaaaaccgtgattac 66
Query: 74 ttatgcaccaacctaata 91
|| |||||||||||||||
Sbjct: 67 ttttgcaccaacctaata 84
>RF01061;mir-548;AADC01066816.1/395993-395910 9606:Homo sapiens
(human)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
|||||||||||| ||||||||| ||||||||||||||
Sbjct: 38 atggccaaaaccgcaattactttagcaccaacctaata 1
>RF01061;mir-548;CABD01343912.1/1154-1071 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||| ||||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| | |||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccat 38
>RF01061;mir-548;CABD01346604.1/3997-4080 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| || ||||||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgtaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||| || |||||| |||||||||||||||
Sbjct: 47 atggcaaaaaccgcacttacttttgcaccaacctaata 84
>RF01061;mir-548;AANU01170885.1/1-85 9544:Macaca mulatta (rhesus
monkey)
Length = 85
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||| ||||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| | |||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggtttttgccat 38
>RF01061;mir-548;AANU01248525.1/14264-14347 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||||||| |||||||| |||||||||||||||
Sbjct: 38 atggcaaaaaccataattacttttgcaccaacctaata 1
>RF01061;mir-548;AADC01022461.1/57990-57907 9606:Homo sapiens
(human)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 10 attaagttggtgcaaacgtaattgcaggttttgccat 46
|||| ||||||||||| |||||||| |||||||||||
Sbjct: 83 attaggttggtgcaaaagtaattgcgggttttgccat 47
>RF01061;mir-548;CABD01089019.1/6160-6243 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 55 tggccaaaaccacaattacttatgcaccaacctaata 91
|||| |||||| ||||||||| |||||||||||||||
Sbjct: 37 tggcaaaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01201701.2/1726-1642 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 85
Score = 50.1 bits (25), Expect = 5e-06
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggtttt-gccataaaactca-tggccaaaacca 66
|||||||||||||||| |||||||||| |||| ||||| | ||| |||| |||||||
Sbjct: 85 tattaagttggtgcaacagtaattgcagttttttgccattactttcaatggcaaaaacca 26
Query: 67 caattacttatgcaccaacctaata 91
||| |||| |||||||||||||||
Sbjct: 25 caactactgttgcaccaacctaata 1
>RF01061;mir-548;AANU01270843.1/85523-85605 9544:Macaca mulatta
(rhesus monkey)
Length = 83
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 59 caaaaccacaattacttatgcaccaacct 87
||||||||||||||||| |||||||||||
Sbjct: 33 caaaaccacaattacttttgcaccaacct 5
>RF01061;mir-548;ABGA01258901.1/11428-11345 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccac 67
||||| || |||||| | |||||||||| ||||||||| || || || ||||||| |
Sbjct: 1 tattaggtgggtgcagaggtaattgcagtttttgccattgaaggcaatgaccaaaactgc 60
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||||||||||||||
Sbjct: 61 aattacttttgcaccaacctaata 84
>RF01061;mir-548;ABGA01380877.1/47446-47363 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 15 gttggtgcaaacgtaattgcaggttttgccat 46
||||||||||| |||||||||| |||||||||
Sbjct: 78 gttggtgcaaaagtaattgcagtttttgccat 47
Score = 44.1 bits (22), Expect = 3e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccataaaactca-tggccaaaaccacaattac 73
|||| |||||| |||||||||| ||||||||| || || |||| ||||| |||||||
Sbjct: 7 gttgctgcaaaagtaattgcagcttttgccattgaaagcaatggcaaaaactgcaattac 66
Query: 74 ttatgcaccaacct 87
|| |||||||||||
Sbjct: 67 ttttgcaccaacct 80
>RF01061;mir-548;AADA01051643.1/6626-6709 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccata-aaactcatggccaaaaccac 67
||||| ||||||||||| || |||| || ||||||||| ||| | ||||| | |||||
Sbjct: 1 tattaggttggtgcaaaagtgattgtagtttttgccattgaaagtaatggcaatgaccac 60
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||||||| ||||||
Sbjct: 61 aattacttttgcaccaaactaata 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||||| ||||| |||| |||||||||||||||
Sbjct: 38 atggcaaaaactacaatcacttttgcaccaacctaata 1
>RF01061;mir-548;AADA01152819.1/20739-20822 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 11 ttaagttggtgcaaacgtaattgcaggttttgccat 46
||||||||||||||| ||| |||||| |||||||||
Sbjct: 3 ttaagttggtgcaaaagtagttgcagtttttgccat 38
>RF01061;mir-548;AC111199.4/17434-17350 9606:Homo sapiens (human)
Length = 85
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||||||||||||| |||| ||||||||||
Sbjct: 32 aaaaccacaattacttttgcatcaacctaata 1
>RF01061;mir-548;AC003681.1/24588-24671 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaa 89
||||| |||||||||||||||| |||||||| ||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaatctaa 3
>RF01061;mir-548;ABSL01029623.1/494-577 9606:Homo sapiens (human)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||| ||||||||| |||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaata 1
>RF01061;mir-548;CABD01532844.1/1136-1053 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccac 67
||||| |||||||||||| ||||| | ||||||||| |||| | ||||| ||| ||||
Sbjct: 84 tattaggttggtgcaaacacaattgtggtttttgccattaaaagtaatggcaaaagccac 25
Query: 68 aattacttatgcaccaacctaata 91
|| ||| | |||||||||||||||
Sbjct: 24 aactacatttgcaccaacctaata 1
>RF01061;mir-548;CABD01386540.1/401-318 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 15 gttggtgcaaacgtaattgcaggttttgccat 46
||||||||||| |||||||||| |||||||||
Sbjct: 78 gttggtgcaaaagtaattgcagcttttgccat 47
>RF01061;mir-548;CABD01688067.1/1028-1113 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||| ||||||||| |||||||||||||||
Sbjct: 55 aaaaccgcaattacttttgcaccaacctaata 86
>RF01061;mir-548;CABD01524540.2/42-125 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccac 67
||||||||||| ||||| ||||||| | |||||||| ||||| ||||| |||||| |
Sbjct: 1 tattaagttggagcaaaagtaattgtggtttttgccattaaaagcgatggcaaaaaccgc 60
Query: 68 aattacttatgcaccaacctaata 91
||||||| ||| |||||||||||
Sbjct: 61 aattactgttgctccaacctaata 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||||||| ||| ||||| |||||
Sbjct: 38 atggcaaaaaccacaattacttttgctccaacttaata 1
>RF01061;mir-548;CABD01378151.1/10643-10726 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||| ||||||||||| |||||||||||||||
Sbjct: 53 aaaatcacaattacttttgcaccaacctaata 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||| |||||||| ||| |||||||||||||||
Sbjct: 38 atggcaaaatccacaatttcttttgcaccaacctaata 1
>RF01061;mir-548;AANU01112255.1/642-725 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaata 91
|||||||||||||||| |||||| ||||||||
Sbjct: 32 aaaaccacaattacttttgcacccacctaata 1
>RF01061;mir-548;AANU01199994.1/1877-1794 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccataaaactc-atggccaaaaccac 67
||||| |||||| |||||||||||| ||||||||||| | || |||| ||||||||
Sbjct: 84 tattaggttggtacaaacgtaattgtgggttttgccattactttcaatggtaaaaaccac 25
Query: 68 aattacttatgcaccaacctaata 91
||||| | |||||||||||||||
Sbjct: 24 aattatgtttgcaccaacctaata 1
>RF01061;mir-548;AANU01272376.1/8292-8209 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 48.1 bits (24), Expect = 2e-05
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccac 67
||||| ||| ||||||| |||||||| | |||||||| | ||| | |||| ||||| |
Sbjct: 1 tattaggtttgtgcaaaagtaattgccgtttttgccactgaaagtaatggtggaaaccgc 60
Query: 68 aattacttatgcaccaacctaata 91
|||||||| |||||||||||||||
Sbjct: 61 aattacttttgcaccaacctaata 84
>RF01061;mir-548;ABGA01209240.1/4651-4734 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccacaattac 73
||||||||||| || |||||| ||||||||| |||| | ||| | ||||| |||||||
Sbjct: 7 gttggtgcaaaagttattgcattttttgccattaaaagtaatgccaaaaactgcaattac 66
Query: 74 ttatgcaccaaccta 88
|| ||||||||||||
Sbjct: 67 ttttgcaccaaccta 81
>RF01061;mir-548;ABBA01068880.1/357-274 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 60 aaaaccacaattacttatgcaccaacctaat 90
|||||| ||||||||| ||||||||||||||
Sbjct: 32 aaaaccgcaattacttttgcaccaacctaat 2
>RF01061;mir-548;AC126755.3/45-128 9606:Homo sapiens (human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaaccta 88
||||| ||||||||||| |||| ||||||||||||
Sbjct: 38 atggcaaaaaccacaatcacttttgcaccaaccta 4
>RF01061;mir-548;AADC01102129.1/13137-13054 9606:Homo sapiens
(human)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 54 atggccaaaaccacaattacttatgcaccaaccta 88
||||| |||||| ||||||||| ||||||||||||
Sbjct: 47 atggcaaaaaccgcaattacttttgcaccaaccta 81
>RF01061;mir-548;CABD01195132.2/4219-4302 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 69/83 (83%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 10 attaagttggtgcaaacgtaattgcaggttttgccataaaactc-atggccaaaaccaca 68
|||| |||| |||||| ||||||||||||||||| || | || ||||| ||| |||||
Sbjct: 83 attaggttgctgcaaaagtaattgcaggttttgctattactttcaatggcaaaacccaca 24
Query: 69 attacttatgcaccaacctaata 91
|||||| |||| ||||||||||
Sbjct: 23 gttacttttgcagcaacctaata 1
>RF01061;mir-548;AANU01260291.1/17494-17411 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 61 aaaccacaattacttatgcaccaacctaata 91
|||||||||||| || |||||||||||||||
Sbjct: 31 aaaccacaattatttttgcaccaacctaata 1
>RF01061;mir-548;AANU01255888.1/15264-15181 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaa 84
||||| |||||||||||||||| ||||||||
Sbjct: 38 atggcaaaaaccacaattacttttgcaccaa 8
>RF00015;U4;AAPY01611593.1/548-750 37347:Tupaia belangeri (northern
tree shrew)
Length = 203
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 64 ccacaattacttatgcaccaacctaat 90
|||||||||||| ||||||||||||||
Sbjct: 79 ccacaattacttttgcaccaacctaat 105
>RF01061;mir-548;ABGA01014573.1/16804-16721 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||| |||||||||||| |||||||| ||||||
Sbjct: 38 atggcaaaacccacaattacttttgcaccaagctaata 1
>RF01061;mir-548;ABGA01227794.1/7074-6991 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacct 87
||||| |||||| ||||||||| |||||||||||
Sbjct: 38 atggcaaaaaccgcaattacttttgcaccaacct 5
>RF01061;mir-548;ABGA01086348.1/10388-10471 9601:Pongo abelii
(Sumatran orangutan)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 17 tggtgcaaacgtaattgcaggttttgccataaaac-tcatggccaaaaccacaattactt 75
||||| |||||||||||| |||||| |||| | | | ||||| |||||| ||||||| |
Sbjct: 76 tggtggaaacgtaattgcgggttttaccattactcttaatggcaaaaaccgcaattacat 17
Query: 76 atgcaccaacctaa 89
|||||||||||||
Sbjct: 16 ttgcaccaacctaa 3
>RF01061;mir-548;AACZ02184973.1/13727-13644 9598:Pan troglodytes
(chimpanzee)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacct 87
||||| ||||||||| |||||| |||||||||||
Sbjct: 38 atggcaaaaaccacagttacttttgcaccaacct 5
>RF01061;mir-548;AL160056.16/43591-43674 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccat-aaaactcatggccaaaaccacaattac 73
|||||||||| |||||||| | ||||||||| |||| | ||||| ||| || ||||||
Sbjct: 7 gttggtgcaagagtaattgcggtttttgccattaaaagtaatggcaaaagtcaaaattac 66
Query: 74 ttatgcaccaacctaata 91
| |||||||||||||||
Sbjct: 67 tcttgcaccaacctaata 84
>RF01061;mir-548;AADC01015139.1/1187-1100 9606:Homo sapiens
(human)
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| | |||||||||
Sbjct: 1 tattatgttggtgcaaaagtaattgcggtttttgccat 38
>RF01061;mir-548;AC019159.8/76273-76190 9606:Homo sapiens (human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||| ||| | |||||||||||||||
Sbjct: 38 atggcaaaaaccacaaatacatttgcaccaacctaata 1
>RF01061;mir-548;AADC01023522.1/7145-7062 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| ||||||||| |||||||||
Sbjct: 1 tattaggttggtgcaaaggtaattgcactttttgccat 38
>RF01061;mir-548;AADB02001154.1/69220-69137 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| ||||| || |||||||||||
Sbjct: 1 tattaggttggtgcaaaagtaatggcgggttttgccat 38
>RF01061;mir-548;AADB02011915.1/382962-383045 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| ||||||||||
Sbjct: 1 tattacgttggtgcaaaagtaattgccagttttgccat 38
>RF01061;mir-548;ABSL01074616.1/61238-61321 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| ||||||||| |||||||||
Sbjct: 1 tattaggttggtgcaaaaataattgcagtttttgccat 38
>RF01061;mir-548;AC004963.2/156846-156763 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||| ||||||||||| |||||||||||||||
Sbjct: 38 atggcaaaagccacaattactgttgcaccaacctaata 1
>RF01061;mir-548;AADC01094388.1/15092-15175 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||||||||||| |||| ||| |||||||||||
Sbjct: 38 atggcaaaaaccacaatgacttttgccccaacctaata 1
>RF01061;mir-548;AADC01015752.1/126987-127070 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccacaattac 73
||||||||||| |||||||| | |||||||| | ||| | ||||| |||||| || ||||
Sbjct: 7 gttggtgcaaatgtaattgcggtttttgccattgaaagtaatggcaaaaaccgcatttac 66
Query: 74 ttatgcaccaacctaata 91
| ||||| |||||||||
Sbjct: 67 gtttgcactaacctaata 84
>RF01061;mir-548;AADB02016080.1/5738062-5737979 9606:Homo sapiens
(human)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||||| | |||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcagttcttgccat 38
>RF01061;mir-548;AP001729.1/31449-31355 9606:Homo sapiens (human)
Length = 95
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||| ||||||||| ||| |||||||||||
Sbjct: 58 atggcgaaaaccgcaattacttttgcgccaacctaata 95
>RF01061;mir-548;CABD01355261.2/2635-2552 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 53/62 (85%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgccata-aaactcatggccaaaaccacaattac 73
||||| ||||| |||||||| | ||||||||| ||| | ||||| ||||||||||||||
Sbjct: 7 gttggagcaaaagtaattgcggtttttgccattgaaagtaatggcaaaaaccacaattac 66
Query: 74 tt 75
||
Sbjct: 67 tt 68
>RF01061;mir-548;CABD01001244.1/12488-12571 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||| || ||||||||| |||||||||||||||
Sbjct: 38 atggcaaaatccgcaattacttttgcaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| | |||||||||
Sbjct: 1 tattaggttggtgcaaaagtaattgcggattttgccat 38
>RF01061;mir-548;CABD01085041.1/3135-3052 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 9 tattaagttggtgcaaacgtaattgcaggttttgccat 46
||||| ||||||||||| |||||||| | |||||||||
Sbjct: 1 tattatgttggtgcaaaagtaattgcggtttttgccat 38
>RF01061;mir-548;CABD01203916.1/289-206 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 17 tggtgcaaacgtaattgcaggttttgccata-aaactcatggccaaaaccacaattactt 75
|||||| || |||||||||| ||||||||| ||| | ||||| |||| | |||||||||
Sbjct: 9 tggtgccaaagtaattgcagtttttgccattgaaagtaatggcaaaaatcgcaattactt 68
Query: 76 atgcaccaacctaa 89
||||||||||||
Sbjct: 69 tggcaccaacctaa 82
>RF01061;mir-548;AC195618.4/124253-124170 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| ||||||||||| ||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacaatagcttttgcaccaacctaata 1
>RF01061;mir-548;AANU01285209.1/57947-57864 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||| || |||| |||||||||||||||
Sbjct: 38 atggcaaaaaccacgataacttttgcaccaacctaata 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 60 aaaaccacaattacttatgcaccaacctaa 89
|||||| ||||||||| |||||||||||||
Sbjct: 53 aaaaccgcaattacttttgcaccaacctaa 82
>RF01061;mir-548;AANU01113788.1/5460-5543 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 54 atggccaaaaccacaattacttatgcaccaacctaata 91
||||| |||||||||||| ||| |||| ||||||||||
Sbjct: 38 atggcaaaaaccacaattgcttttgcatcaacctaata 1
>RF01061;mir-548;AC202678.6/146907-146824 9544:Macaca mulatta
(rhesus monkey)
Length = 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 65/78 (83%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 15 gttggtgcaaacgtaattgcaggttttgcca-taaaactcatggccaaaaccacaattac 73
||||||||||| |||||||| | ||||| || | ||| | ||||| || ||| |||||||
Sbjct: 7 gttggtgcaaaagtaattgcggtttttgtcattgaaagtaatggcaaagaccgcaattac 66
Query: 74 ttatgcaccaacctaata 91
|| ||||||||| |||||
Sbjct: 67 ttttgcaccaacataata 84
