miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AC232167.1/58295-58055 63629:Oryza minuta
          Length = 241

 Score = 46.1 bits (23), Expect = 3e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tactccctccgtcccaaattgtatgac 39
          |||||||||||||||||| ||||||||
Sbjct: 2  tactccctccgtcccaaaatgtatgac 28

>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
           (sorghum)
          Length = 115

 Score = 46.1 bits (23), Expect = 3e-04
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 12  ttactccctccgtcccaaattgtatgacgttttgg 46
           ||||||||||||| ||||||| || ||||||||||
Sbjct: 112 ttactccctccgttccaaattataagacgttttgg 78